RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 CCDC81Q6ZN84 652 aa3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 PPP1R13LQ8WUF5 828 aa3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 GATA6Q92908 595 aa3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 VWCEQ96DN2 955 aa3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 FERD3LQ96RJ6 166 aa3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 SLC9A7Q96T83 725 aa3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 TM9SF2Q99805 663 aa3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 FAM83CQ9BQN1 747 aa3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 DBNDD2Q9BQY9 259 aa3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 HIRIP3Q9BW71 556 aaPredicted RBP3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 SEMA6CQ9H3T2 930 aa3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 C7orf69Q9H7B7 122 aa3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 C1GALT1Q9NS00 363 aa3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 STOML1Q9UBI4 398 aa3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 AP4E1Q9UPM8 1137 aa3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 A0A1W2PQH9 124 aa3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 RGS13O14921 159 aa3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 SMAD7O15105 426 aaKnown RBP3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 SART1O43290 800 aaKnown RBP3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 LRIG2O94898 1065 aa3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 UBOX5O94941 541 aa3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 SSBP05455 408 aaKnown RBP eCLIP3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 NFICP08651 508 aa3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 BMP3P12645 472 aa3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 HCLS1P14317 486 aaPredicted RBP3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 GUCY2CP25092 1073 aa3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 MAP4P27816 1152 aaKnown RBP3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 GRIK1P39086 918 aa3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 ETF1P62495 437 aaKnown RBP3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 RAB33AQ14088 237 aa3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 MSMPQ1L6U9 139 aa3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 FBLN7Q53RD9 439 aa3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 TNNI3KQ59H18 835 aa3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 RNF43Q68DV7 783 aa3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 OVOS1Q6IE37 1185 aa3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 RUFY4Q6ZNE9 571 aa3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 NLRC3Q7RTR2 1065 aa3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 CLEC10AQ8IUN9 316 aa3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 DNAJB8Q8NHS0 232 aa3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 FBLIM1Q8WUP2 373 aa3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 MKL1Q969V6 931 aa3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 CRBNQ96SW2 442 aa3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 FOXQ1Q9C009 403 aa3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 TNKS2Q9H2K2 1166 aa3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 MSRB2Q9Y3D2 182 aa3.02□□□□□ -1.93
NUCKS1-202ENST00000464938 LTBP3Q9NS15 1303 aa3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 FAM95CA0A1B0GW59 222 aa3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 DHX15O43143 795 aaKnown RBP3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 STK10O94804 968 aaKnown RBP3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 HOXA10P31260 410 aaPredicted RBP3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 GTF2F1P35269 517 aaKnown RBP eCLIP3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 USP11P51784 963 aa3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 YARSP54577 528 aaKnown RBP3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 MLECQ14165 292 aa3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 MAP7Q14244 749 aa3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 ARSHQ5FYA8 562 aa3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 PRAMEF13Q5VWM6 474 aa3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 UNC5AQ6ZN44 842 aa3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 ANKS3Q6ZW76 656 aa3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 CDC37L1Q7L3B6 337 aa3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 ARMCX6Q7L4S7 300 aa3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 LRP10Q7Z4F1 713 aa3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 TTC6Q86TZ1 520 aa3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 MFSD2AQ8NA29 543 aa3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 CYB5D2Q8WUJ1 264 aa3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 CPLX3Q8WVH0 158 aa3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 UTP4Q969X6 686 aaKnown RBP3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 ANAPC16Q96DE5 110 aa3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 KRTAP9-3Q9BYQ3 159 aa3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 LNPKQ9C0E8 428 aa3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 PIDD1Q9HB75 910 aa3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 USP35Q9P2H5 1018 aa3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 CEP131Q9UPN4 1083 aa3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 MRVI1Q9Y6F6 885 aa3.01□□□□□ -1.93
NUCKS1-202ENST00000464938 CNTNAP4Q9C0A0 1308 aa3□□□□□ -1.93
NUCKS1-202ENST00000464938 HMX2A2RU54 273 aa3□□□□□ -1.93
NUCKS1-202ENST00000464938 GAS2O43903 313 aaKnown RBP3□□□□□ -1.93
NUCKS1-202ENST00000464938 RNGTTO60942 597 aaKnown RBP3□□□□□ -1.93
NUCKS1-202ENST00000464938 SLITRK5O94991 958 aa3□□□□□ -1.93
NUCKS1-202ENST00000464938 EOMESO95936 686 aa3□□□□□ -1.93
NUCKS1-202ENST00000464938 PRNPP04156 253 aa3□□□□□ -1.93
NUCKS1-202ENST00000464938 ADMP35318 185 aa3□□□□□ -1.93
NUCKS1-202ENST00000464938 ZYXQ15942 572 aaKnown RBP3□□□□□ -1.93
NUCKS1-202ENST00000464938 OGFOD3Q6PK18 319 aa3□□□□□ -1.93
NUCKS1-202ENST00000464938 BEND4Q6ZU67 534 aa3□□□□□ -1.93
NUCKS1-202ENST00000464938 DPH6Q7L8W6 267 aa3□□□□□ -1.93
NUCKS1-202ENST00000464938 TMEM192Q8IY95 271 aa3□□□□□ -1.93
NUCKS1-202ENST00000464938 CKAP2LQ8IYA6 745 aa3□□□□□ -1.93
NUCKS1-202ENST00000464938 CELF2-AS1Q8N7Q2 184 aa3□□□□□ -1.93
NUCKS1-202ENST00000464938 FAM13CQ8NE31 585 aa3□□□□□ -1.93
NUCKS1-202ENST00000464938 RIN3Q8TB24 985 aa3□□□□□ -1.93
NUCKS1-202ENST00000464938 BAHD1Q8TBE0 780 aaPredicted RBP3□□□□□ -1.93
NUCKS1-202ENST00000464938 MICAL1Q8TDZ2 1067 aa3□□□□□ -1.93
NUCKS1-202ENST00000464938 CCDC74BQ96LY2 380 aa3□□□□□ -1.93
NUCKS1-202ENST00000464938 DNAJC2Q99543 621 aaKnown RBP3□□□□□ -1.93
NUCKS1-202ENST00000464938 KIF2CQ99661 725 aa3□□□□□ -1.93
NUCKS1-202ENST00000464938 DUSP23Q9BVJ7 150 aa3□□□□□ -1.93
NUCKS1-202ENST00000464938 YIPF2Q9BWQ6 316 aa3□□□□□ -1.93
NUCKS1-202ENST00000464938 PRDM10Q9NQV6 1147 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms