RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 SWAP70Q9UH65 585 aa31.14■■■□□ 2.58
U2AF1-206ENST00000464750 TAOK2Q9UL54 1235 aa31.14■■■□□ 2.58
U2AF1-206ENST00000464750 SLC4A4Q9Y6R1 1079 aa31.14■■■□□ 2.58
U2AF1-206ENST00000464750 PLXNB2O15031 1838 aa31.14■■■□□ 2.58
U2AF1-206ENST00000464750 CCL5P13501 91 aa31.13■■■□□ 2.57
U2AF1-206ENST00000464750 PXYLP1Q8TE99 480 aa31.13■■■□□ 2.57
U2AF1-206ENST00000464750 DDRGK1Q96HY6 314 aa31.13■■■□□ 2.57
U2AF1-206ENST00000464750 TXNRD2Q9NNW7 524 aa31.13■■■□□ 2.57
U2AF1-206ENST00000464750 PEX10O60683 326 aa31.12■■■□□ 2.57
U2AF1-206ENST00000464750 AMOTL1Q8IY63 956 aa31.12■■■□□ 2.57
U2AF1-206ENST00000464750 GTF3C2Q8WUA4 911 aaPredicted RBP31.12■■■□□ 2.57
U2AF1-206ENST00000464750 CYP2D7A0A087X1C5 515 aa31.11■■■□□ 2.57
U2AF1-206ENST00000464750 VCAM1P19320 739 aa31.11■■■□□ 2.57
U2AF1-206ENST00000464750 TTC41PQ6P2S7 1318 aa31.11■■■□□ 2.57
U2AF1-206ENST00000464750 USP17L15C9J2P7 530 aa31.1■■■□□ 2.57
U2AF1-206ENST00000464750 USP17L13C9JLJ4 530 aa31.1■■■□□ 2.57
U2AF1-206ENST00000464750 USP17L12C9JPN9 530 aa31.1■■■□□ 2.57
U2AF1-206ENST00000464750 USP17L11C9JVI0 530 aa31.1■■■□□ 2.57
U2AF1-206ENST00000464750 USP17L21D6R901 530 aa31.1■■■□□ 2.57
U2AF1-206ENST00000464750 USP17L18D6R9N7 530 aa31.1■■■□□ 2.57
U2AF1-206ENST00000464750 USP17L22D6RA61 530 aa31.1■■■□□ 2.57
U2AF1-206ENST00000464750 USP17L17D6RBQ6 530 aa31.1■■■□□ 2.57
U2AF1-206ENST00000464750 USP17L19D6RCP7 530 aa31.1■■■□□ 2.57
U2AF1-206ENST00000464750 USP17L20D6RJB6 530 aa31.1■■■□□ 2.57
U2AF1-206ENST00000464750 INHAP05111 366 aa31.1■■■□□ 2.57
U2AF1-206ENST00000464750 USP17L24Q0WX57 530 aa31.1■■■□□ 2.57
U2AF1-206ENST00000464750 C12orf60Q5U649 245 aa31.1■■■□□ 2.57
U2AF1-206ENST00000464750 GPRC5AQ8NFJ5 357 aa31.1■■■□□ 2.57
U2AF1-206ENST00000464750 SHISA4Q96DD7 197 aa31.1■■■□□ 2.57
U2AF1-206ENST00000464750 RNF208Q9H0X6 261 aa31.1■■■□□ 2.57
U2AF1-206ENST00000464750 SMIM22K7EJ46 135 aa31.09■■■□□ 2.57
U2AF1-206ENST00000464750 TMEM179Q6ZVK1 233 aa31.09■■■□□ 2.57
U2AF1-206ENST00000464750 OTUD7AQ8TE49 926 aaPredicted RBP31.09■■■□□ 2.57
U2AF1-206ENST00000464750 APPBP2Q92624 585 aa31.09■■■□□ 2.57
U2AF1-206ENST00000464750 PAGR1Q9BTK6 254 aa31.09■■■□□ 2.57
U2AF1-206ENST00000464750 RBPJLQ9UBG7 517 aa31.09■■■□□ 2.57
U2AF1-206ENST00000464750 ERVK-9P63128 1117 aa31.08■■■□□ 2.57
U2AF1-206ENST00000464750 ERVK-24P63145 666 aa31.08■■■□□ 2.57
U2AF1-206ENST00000464750 UNC93B1Q9H1C4 597 aa31.08■■■□□ 2.57
U2AF1-206ENST00000464750 ERC2O15083 957 aa31.07■■■□□ 2.56
U2AF1-206ENST00000464750 GJB1P08034 283 aa31.07■■■□□ 2.56
U2AF1-206ENST00000464750 AKR1B1P15121 316 aa31.07■■■□□ 2.56
U2AF1-206ENST00000464750 CATSPERGQ6ZRH7 1159 aa31.07■■■□□ 2.56
U2AF1-206ENST00000464750 NKX2-3Q8TAU0 364 aa31.07■■■□□ 2.56
U2AF1-206ENST00000464750 STRBPQ96SI9 672 aaKnown RBP31.07■■■□□ 2.56
U2AF1-206ENST00000464750 A0A1W2PRG0 241 aa31.06■■■□□ 2.56
U2AF1-206ENST00000464750 RNF113AO15541 343 aaKnown RBP31.06■■■□□ 2.56
U2AF1-206ENST00000464750 ZFYP08048 801 aaPredicted RBP31.06■■■□□ 2.56
U2AF1-206ENST00000464750 GJA8P48165 433 aa31.06■■■□□ 2.56
U2AF1-206ENST00000464750 CDK8P49336 464 aa31.06■■■□□ 2.56
U2AF1-206ENST00000464750 CTR9Q6PD62 1173 aa31.06■■■□□ 2.56
U2AF1-206ENST00000464750 POTEEQ6S8J3 1075 aa31.06■■■□□ 2.56
U2AF1-206ENST00000464750 C16orf86Q6ZW13 317 aa31.06■■■□□ 2.56
U2AF1-206ENST00000464750 PI4K2BQ8TCG2 481 aa31.06■■■□□ 2.56
U2AF1-206ENST00000464750 OSBP2Q969R2 916 aa31.06■■■□□ 2.56
U2AF1-206ENST00000464750 RPAP3Q9H6T3 665 aaPredicted RBP31.06■■■□□ 2.56
U2AF1-206ENST00000464750 ARPP21Q9UBL0 812 aaPredicted RBP31.06■■■□□ 2.56
U2AF1-206ENST00000464750 GJD2Q9UKL4 321 aa31.06■■■□□ 2.56
U2AF1-206ENST00000464750 GLRX3O76003 335 aaKnown RBP31.05■■■□□ 2.56
U2AF1-206ENST00000464750 Q3C1V9 767 aa31.05■■■□□ 2.56
U2AF1-206ENST00000464750 MX1P20591 662 aa31.04■■■□□ 2.56
U2AF1-206ENST00000464750 CLEC10AQ8IUN9 316 aa31.04■■■□□ 2.56
U2AF1-206ENST00000464750 CCDC17Q96LX7 622 aa31.04■■■□□ 2.56
U2AF1-206ENST00000464750 MAPK4P31152 587 aa31.03■■■□□ 2.56
U2AF1-206ENST00000464750 ICA1Q05084 483 aa31.03■■■□□ 2.56
U2AF1-206ENST00000464750 CCAR1Q8IX12 1150 aaKnown RBP31.03■■■□□ 2.56
U2AF1-206ENST00000464750 PORCNQ9H237 461 aa31.03■■■□□ 2.56
U2AF1-206ENST00000464750 ZBTB47Q9UFB7 747 aaPredicted RBP31.03■■■□□ 2.56
U2AF1-206ENST00000464750 RABGAP1Q9Y3P9 1069 aa31.03■■■□□ 2.56
U2AF1-206ENST00000464750 GPAA1O43292 621 aa31.02■■■□□ 2.56
U2AF1-206ENST00000464750 CNMDO75829 334 aa31.02■■■□□ 2.56
U2AF1-206ENST00000464750 LRRFIP1Q32MZ4 808 aaKnown RBP31.02■■■□□ 2.56
U2AF1-206ENST00000464750 U2AF1L4Q8WU68 220 aaKnown RBP31.02■■■□□ 2.56
U2AF1-206ENST00000464750 SOCS4Q8WXH5 440 aa31.02■■■□□ 2.56
U2AF1-206ENST00000464750 ARHGEF10LQ9HCE6 1279 aa31.02■■■□□ 2.56
U2AF1-206ENST00000464750 A0A0G2JMZ2 1700 aa31.01■■■□□ 2.56
U2AF1-206ENST00000464750 RLFQ13129 1914 aa31.01■■■□□ 2.55
U2AF1-206ENST00000464750 GREB1LQ9C091 1923 aaPredicted RBP31.01■■■□□ 2.55
U2AF1-206ENST00000464750 SPDYE16A6NNV3 312 aaPredicted RBP31.01■■■□□ 2.55
U2AF1-206ENST00000464750 GSG1L2A8MUP6 293 aa31.01■■■□□ 2.55
U2AF1-206ENST00000464750 M0R2C6 588 aa31.01■■■□□ 2.55
U2AF1-206ENST00000464750 HMGCRP04035 888 aa31.01■■■□□ 2.55
U2AF1-206ENST00000464750 HDAC1Q13547 482 aaPredicted RBP31.01■■■□□ 2.55
U2AF1-206ENST00000464750 ANKRD45Q5TZF3 282 aa31.01■■■□□ 2.55
U2AF1-206ENST00000464750 NUDT12Q9BQG2 462 aa31.01■■■□□ 2.55
U2AF1-206ENST00000464750 SALL3Q9BXA9 1300 aa31■■■□□ 2.55
U2AF1-206ENST00000464750 CYP2B6P20813 491 aa31■■■□□ 2.55
U2AF1-206ENST00000464750 GIMAP6Q6P9H5 292 aa31■■■□□ 2.55
U2AF1-206ENST00000464750 LBX2Q6XYB7 198 aa31■■■□□ 2.55
U2AF1-206ENST00000464750 GPR142Q7Z601 462 aa31■■■□□ 2.55
U2AF1-206ENST00000464750 GCC1Q96CN9 775 aa31■■■□□ 2.55
U2AF1-206ENST00000464750 FSD1Q9BTV5 496 aa31■■■□□ 2.55
U2AF1-206ENST00000464750 SH2D4AQ9H788 454 aa31■■■□□ 2.55
U2AF1-206ENST00000464750 PARP14Q460N5 1801 aa30.99■■■□□ 2.55
U2AF1-206ENST00000464750 SBK1Q52WX2 424 aa30.99■■■□□ 2.55
U2AF1-206ENST00000464750 TANGO6Q9C0B7 1094 aa30.99■■■□□ 2.55
U2AF1-206ENST00000464750 ROBO3Q96MS0 1386 aa30.98■■■□□ 2.55
U2AF1-206ENST00000464750 GNAT2P19087 354 aa30.98■■■□□ 2.55
U2AF1-206ENST00000464750 CCNA1P78396 465 aa30.98■■■□□ 2.55
U2AF1-206ENST00000464750 PLEKHH3Q7Z736 793 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms