RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 CCDC102BQ68D86 513 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 PDXDC2PQ6P474 469 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 RSRC2Q7L4I2 434 aaKnown RBP8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 SRGAP1Q7Z6B7 1085 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 KBTBD3Q8NAB2 608 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 FAM71BQ8TC56 605 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 ITPKCQ96DU7 683 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 PANX2Q96RD6 677 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 SLC26A8Q96RN1 970 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 CTAGE1Q96RT6 745 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 TRIM34Q9BYJ4 488 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 GOLPH3LQ9H4A5 285 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 ZFAND3Q9H8U3 227 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 VIPAS39Q9H9C1 493 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 MAP4K5Q9Y4K4 846 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 PARP3Q9Y6F1 533 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 LAMA4Q16363 1823 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 SALL1Q9NSC2 1324 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 ABCC12Q96J65 1359 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 ADAMTS13Q76LX8 1427 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 LTN1O94822 1766 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 TERTO14746 1132 aaKnown RBP8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 NPHP1O15259 732 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 CUTAO60888 179 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 ZIC2O95409 532 aaPredicted RBP8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 CYP21A2P08686 494 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 MAGEA9P43362 315 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 NDUFA8P51970 172 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 CHMP4BP1P59074 171 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 EXOSC10Q01780 885 aaKnown RBP8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 CEBPZQ03701 1054 aaKnown RBP8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 SLC39A14Q15043 492 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 IMMTQ16891 758 aaKnown RBP8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 DPCR1Q3MIW9 517 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 TTC31Q49AM3 519 aaPredicted RBP8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 TNNI3KQ59H18 835 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 SPECC1LQ69YQ0 1117 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 IQCEQ6IPM2 695 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 CCDC70Q6NSX1 233 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 MRPL14Q6P1L8 145 aaKnown RBP8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 TRIM65Q6PJ69 517 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 PPFIBP1Q86W92 1011 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 ANKRD20A12PQ8NF67 263 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 EPS8L1Q8TE68 723 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 IP6K1Q92551 441 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 RPGRIP1Q96KN7 1286 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 CCDC8Q9H0W5 538 aaPredicted RBP8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 DEF6Q9H4E7 631 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 C19orf44Q9H6X5 657 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 GOPCQ9HD26 462 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 CEP131Q9UPN4 1083 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 FPGT-TNNI3KV9GXZ4 949 aa8.2□□□□□ -1.1
CLSTN1-204ENST00000464286 MYO1CO00159 1063 aa8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 TBC1D8O95759 1140 aa8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 CAPN2P17655 700 aa8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 ERCC5P28715 1186 aaPredicted RBP8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 PDIA3P30101 505 aaKnown RBP8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 RFC5P40937 340 aa8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 LMAN1P49257 510 aa8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 TRDNQ13061 729 aa8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 TRIM14Q14142 442 aa8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 NCAPHQ15003 741 aa8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 SAFBQ15424 915 aaKnown RBP eCLIP8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 LONRF2Q1L5Z9 754 aa8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 ERFEQ4G0M1 354 aa8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 TAF7LQ5H9L4 462 aa8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 LCE2CQ5TA81 110 aa8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 ZNF530Q6P9A1 599 aaPredicted RBP8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 VASH1Q7L8A9 365 aaPredicted RBP8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 RALYLQ86SE5 291 aaKnown RBP8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 SRLQ86TD4 932 aa8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 REXO1L1PQ8IX06 675 aa8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 RUBCNQ92622 972 aa8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 PYM1Q9BRP8 204 aaKnown RBP8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 TACO1Q9BSH4 297 aaKnown RBP8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 GEMIN8Q9NWZ8 242 aaKnown RBP8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 CDC23Q9UJX2 597 aa8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 RAB21Q9UL25 225 aa8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 TTF2Q9UNY4 1162 aaKnown RBP8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 RRP15Q9Y3B9 282 aaKnown RBP8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 TBX22Q9Y458 520 aa8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 HEG1Q9ULI3 1381 aa8.19□□□□□ -1.1
CLSTN1-204ENST00000464286 A0A1B0GVL5 298 aa8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 CTAGE9A4FU28 777 aa8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 MAP2K7O14733 419 aa8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 PFKFB1P16118 471 aa8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 FSHRP23945 695 aa8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 LMOD1P29536 600 aaPredicted RBP8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 EIF5P55010 431 aaKnown RBP8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 SETQ01105 290 aaPredicted RBP8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 APOBRQ0VD83 1088 aa8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 ICE2Q659A1 982 aa8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 RPAINQ86UA6 219 aa8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 ZNF589Q86UQ0 364 aaPredicted RBP8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 ARHGEF25Q86VW2 580 aa8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 SPATS2Q86XZ4 545 aaKnown RBP8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 CNGA4Q8IV77 575 aa8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 EFCAB13Q8IY85 973 aa8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 MSANTD4Q8NCY6 345 aa8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 CCDC148Q8NFR7 591 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms