RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 MYOZ2Q9NPC6 264 aa16.86■□□□□ 0.29
COL5A1-205ENST00000464187 TMOD2Q9NZR1 351 aa16.86■□□□□ 0.29
COL5A1-205ENST00000464187 SERPINB13Q9UIV8 391 aa16.86■□□□□ 0.29
COL5A1-205ENST00000464187 CFAP45Q9UL16 551 aa16.86■□□□□ 0.29
COL5A1-205ENST00000464187 CLRN2A0PK11 232 aa16.85■□□□□ 0.29
COL5A1-205ENST00000464187 CCDC69A6NI79 296 aa16.85■□□□□ 0.29
COL5A1-205ENST00000464187 HLA-DOAP06340 250 aa16.85■□□□□ 0.29
COL5A1-205ENST00000464187 RASA1P20936 1047 aa16.85■□□□□ 0.29
COL5A1-205ENST00000464187 GMPSP49915 693 aaPredicted RBP16.85■□□□□ 0.29
COL5A1-205ENST00000464187 MMP14P50281 582 aa16.85■□□□□ 0.29
COL5A1-205ENST00000464187 ENAHQ8N8S7 591 aaPredicted RBP16.85■□□□□ 0.29
COL5A1-205ENST00000464187 DACT1Q9NYF0 836 aa16.85■□□□□ 0.29
COL5A1-205ENST00000464187 ZNF70Q9UC06 446 aaPredicted RBP16.85■□□□□ 0.29
COL5A1-205ENST00000464187 SLC12A7Q9Y666 1083 aa16.85■□□□□ 0.29
COL5A1-205ENST00000464187 DDTLA6NHG4 134 aaPredicted RBP16.84■□□□□ 0.29
COL5A1-205ENST00000464187 WNT10BO00744 389 aa16.84■□□□□ 0.29
COL5A1-205ENST00000464187 NMT2O60551 498 aa16.84■□□□□ 0.29
COL5A1-205ENST00000464187 ENTPD3O75355 529 aa16.84■□□□□ 0.29
COL5A1-205ENST00000464187 ZNF280AP59817 542 aaPredicted RBP16.84■□□□□ 0.29
COL5A1-205ENST00000464187 MICU3Q86XE3 530 aa16.84■□□□□ 0.29
COL5A1-205ENST00000464187 ZSCAN29Q8IWY8 852 aaPredicted RBP16.84■□□□□ 0.29
COL5A1-205ENST00000464187 ZBED3Q96IU2 234 aaPredicted RBP16.84■□□□□ 0.29
COL5A1-205ENST00000464187 FTOQ9C0B1 505 aaKnown RBP eCLIP16.84■□□□□ 0.29
COL5A1-205ENST00000464187 DDX19AQ9NUU7 478 aaKnown RBP16.84■□□□□ 0.29
COL5A1-205ENST00000464187 MYH1P12882 1939 aa16.84■□□□□ 0.29
COL5A1-205ENST00000464187 ZBTB43O43298 467 aa16.84■□□□□ 0.29
COL5A1-205ENST00000464187 MYO1BO43795 1136 aa16.84■□□□□ 0.29
COL5A1-205ENST00000464187 DHX16O60231 1041 aaKnown RBP16.84■□□□□ 0.29
COL5A1-205ENST00000464187 TSPY3P0CV98 308 aa16.84■□□□□ 0.29
COL5A1-205ENST00000464187 TSPY8P0CW00 308 aa16.84■□□□□ 0.29
COL5A1-205ENST00000464187 MAP3K11Q16584 847 aa16.84■□□□□ 0.29
COL5A1-205ENST00000464187 NBPF9Q3BBW0 867 aa16.84■□□□□ 0.29
COL5A1-205ENST00000464187 SPDYE2Q495Y8 402 aa16.84■□□□□ 0.29
COL5A1-205ENST00000464187 IFIT1BQ5T764 474 aaKnown RBP16.84■□□□□ 0.29
COL5A1-205ENST00000464187 MICALL2Q8IY33 904 aa16.84■□□□□ 0.29
COL5A1-205ENST00000464187 MYL10Q9BUA6 226 aa16.84■□□□□ 0.29
COL5A1-205ENST00000464187 TCP10L2B9ZVM9 353 aa16.83■□□□□ 0.28
COL5A1-205ENST00000464187 RXRAP19793 462 aa16.83■□□□□ 0.28
COL5A1-205ENST00000464187 METAP2P50579 478 aaKnown RBP eCLIP16.83■□□□□ 0.28
COL5A1-205ENST00000464187 CEBPZQ03701 1054 aaKnown RBP16.83■□□□□ 0.28
COL5A1-205ENST00000464187 SYNE3Q6ZMZ3 975 aa16.83■□□□□ 0.28
COL5A1-205ENST00000464187 SH3BP5LQ7L8J4 393 aa16.83■□□□□ 0.28
COL5A1-205ENST00000464187 BICD2Q8TD16 824 aa16.83■□□□□ 0.28
COL5A1-205ENST00000464187 USP28Q96RU2 1077 aa16.83■□□□□ 0.28
COL5A1-205ENST00000464187 EHD4Q9H223 541 aa16.83■□□□□ 0.28
COL5A1-205ENST00000464187 CLSTN2Q9H4D0 955 aa16.83■□□□□ 0.28
COL5A1-205ENST00000464187 PI4KBQ9UBF8 816 aa16.83■□□□□ 0.28
COL5A1-205ENST00000464187 CNOT7Q9UIV1 285 aaKnown RBP16.83■□□□□ 0.28
COL5A1-205ENST00000464187 RCOR1Q9UKL0 485 aa16.83■□□□□ 0.28
COL5A1-205ENST00000464187 NR1I2O75469 434 aa16.82■□□□□ 0.28
COL5A1-205ENST00000464187 EGFRP00533 1210 aa16.82■□□□□ 0.28
COL5A1-205ENST00000464187 CAMK4Q16566 473 aa16.82■□□□□ 0.28
COL5A1-205ENST00000464187 RBM26Q5T8P6 1007 aaKnown RBP16.82■□□□□ 0.28
COL5A1-205ENST00000464187 ATL3Q6DD88 541 aa16.82■□□□□ 0.28
COL5A1-205ENST00000464187 ZNF396Q96N95 335 aaPredicted RBP16.82■□□□□ 0.28
COL5A1-205ENST00000464187 VEZTQ9HBM0 779 aa16.82■□□□□ 0.28
COL5A1-205ENST00000464187 IL17RBQ9NRM6 502 aa16.82■□□□□ 0.28
COL5A1-205ENST00000464187 ORC3Q9UBD5 711 aaPredicted RBP16.82■□□□□ 0.28
COL5A1-205ENST00000464187 SWAP70Q9UH65 585 aa16.82■□□□□ 0.28
COL5A1-205ENST00000464187 CCDC192P0DO97 292 aa16.82■□□□□ 0.28
COL5A1-205ENST00000464187 RBM43Q6ZSC3 357 aaKnown RBP16.82■□□□□ 0.28
COL5A1-205ENST00000464187 CCDC144CPQ8IYA2 1237 aa16.82■□□□□ 0.28
COL5A1-205ENST00000464187 GPC2Q8N158 579 aa16.82■□□□□ 0.28
COL5A1-205ENST00000464187 C8orf76Q96K31 380 aa16.82■□□□□ 0.28
COL5A1-205ENST00000464187 TNMDQ9H2S6 317 aa16.82■□□□□ 0.28
COL5A1-205ENST00000464187 RNF181Q9P0P0 153 aa16.82■□□□□ 0.28
COL5A1-205ENST00000464187 USP25Q9UHP3 1055 aa16.82■□□□□ 0.28
COL5A1-205ENST00000464187 ATRNL1Q5VV63 1379 aa16.81■□□□□ 0.28
COL5A1-205ENST00000464187 GOLGA8AA7E2F4 631 aa16.81■□□□□ 0.28
COL5A1-205ENST00000464187 CPLX1O14810 134 aa16.81■□□□□ 0.28
COL5A1-205ENST00000464187 OTUD7BQ6GQQ9 843 aa16.81■□□□□ 0.28
COL5A1-205ENST00000464187 SAMD7Q7Z3H4 446 aa16.81■□□□□ 0.28
COL5A1-205ENST00000464187 ZNF654Q8IZM8 581 aa16.81■□□□□ 0.28
COL5A1-205ENST00000464187 CRACR2BQ8N4Y2 399 aaPredicted RBP16.81■□□□□ 0.28
COL5A1-205ENST00000464187 TCP11L1Q9NUJ3 509 aa16.81■□□□□ 0.28
COL5A1-205ENST00000464187 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.81■□□□□ 0.28
COL5A1-205ENST00000464187 NOL7Q9UMY1 257 aaKnown RBP16.81■□□□□ 0.28
COL5A1-205ENST00000464187 SLURP2P0DP57 97 aa16.8■□□□□ 0.28
COL5A1-205ENST00000464187 SHMT1P34896 483 aa16.8■□□□□ 0.28
COL5A1-205ENST00000464187 FKBP1CQ5VVH2 108 aa16.8■□□□□ 0.28
COL5A1-205ENST00000464187 RCSD1Q6JBY9 416 aa16.8■□□□□ 0.28
COL5A1-205ENST00000464187 DGKHQ86XP1 1220 aa16.8■□□□□ 0.28
COL5A1-205ENST00000464187 NEDD1Q8NHV4 660 aa16.8■□□□□ 0.28
COL5A1-205ENST00000464187 CSRNP1Q96S65 589 aa16.8■□□□□ 0.28
COL5A1-205ENST00000464187 DNAJC18Q9H819 358 aa16.8■□□□□ 0.28
COL5A1-205ENST00000464187 CCDC39Q9UFE4 941 aa16.8■□□□□ 0.28
COL5A1-205ENST00000464187 MYH6P13533 1939 aa16.8■□□□□ 0.28
COL5A1-205ENST00000464187 CDC27P30260 824 aa16.8■□□□□ 0.28
COL5A1-205ENST00000464187 RCAN1P53805 252 aa16.8■□□□□ 0.28
COL5A1-205ENST00000464187 TYRO3Q06418 890 aa16.8■□□□□ 0.28
COL5A1-205ENST00000464187 GPR162Q16538 588 aa16.8■□□□□ 0.28
COL5A1-205ENST00000464187 TBC1D10BQ4KMP7 808 aaPredicted RBP16.8■□□□□ 0.28
COL5A1-205ENST00000464187 CCDC178Q5BJE1 867 aa16.8■□□□□ 0.28
COL5A1-205ENST00000464187 CATIPQ7Z7H3 387 aa16.8■□□□□ 0.28
COL5A1-205ENST00000464187 CKAP2LQ8IYA6 745 aa16.8■□□□□ 0.28
COL5A1-205ENST00000464187 FBXO18Q8NFZ0 1043 aa16.8■□□□□ 0.28
COL5A1-205ENST00000464187 NUP133Q8WUM0 1156 aa16.8■□□□□ 0.28
COL5A1-205ENST00000464187 FAM151AQ8WW52 585 aa16.8■□□□□ 0.28
COL5A1-205ENST00000464187 MRVI1Q9Y6F6 885 aa16.8■□□□□ 0.28
COL5A1-205ENST00000464187 COL2A1P02458 1487 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms