RNA–Protein interactions for RNA: ENST00000463936.1

RTN4R-204, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-204ENST00000463936 PAGR1Q9BTK6 254 aa17.49■□□□□ 0.39
RTN4R-204ENST00000463936 BTBD7Q9P203 1132 aa17.49■□□□□ 0.39
RTN4R-204ENST00000463936 STAP2Q9UGK3 403 aa17.49■□□□□ 0.39
RTN4R-204ENST00000463936 PRKAR2AP13861 404 aaKnown RBP17.48■□□□□ 0.39
RTN4R-204ENST00000463936 MAP3K12Q12852 859 aa17.48■□□□□ 0.39
RTN4R-204ENST00000463936 RAB3GAP1Q15042 981 aa17.48■□□□□ 0.39
RTN4R-204ENST00000463936 CERKLQ49MI3 558 aaPredicted RBP17.48■□□□□ 0.39
RTN4R-204ENST00000463936 CATSPERGQ6ZRH7 1159 aa17.48■□□□□ 0.39
RTN4R-204ENST00000463936 GPR142Q7Z601 462 aa17.48■□□□□ 0.39
RTN4R-204ENST00000463936 SIAH1Q8IUQ4 282 aa17.48■□□□□ 0.39
RTN4R-204ENST00000463936 TRIM34Q9BYJ4 488 aa17.48■□□□□ 0.39
RTN4R-204ENST00000463936 HMX1Q9NP08 348 aaPredicted RBP17.48■□□□□ 0.39
RTN4R-204ENST00000463936 FLRT1Q9NZU1 646 aa17.48■□□□□ 0.39
RTN4R-204ENST00000463936 OGDHLQ9ULD0 1010 aa17.48■□□□□ 0.39
RTN4R-204ENST00000463936 ZNF532Q9HCE3 1301 aa17.47■□□□□ 0.39
RTN4R-204ENST00000463936 RLFQ13129 1914 aa17.47■□□□□ 0.39
RTN4R-204ENST00000463936 PRKAB2O43741 272 aa17.47■□□□□ 0.39
RTN4R-204ENST00000463936 EVI5O60447 810 aa17.47■□□□□ 0.39
RTN4R-204ENST00000463936 XRCC5P13010 732 aaKnown RBP17.47■□□□□ 0.39
RTN4R-204ENST00000463936 CCND3P30281 292 aaPredicted RBP17.47■□□□□ 0.39
RTN4R-204ENST00000463936 SEPT2Q15019 361 aa17.47■□□□□ 0.39
RTN4R-204ENST00000463936 ABCB5Q2M3G0 1257 aa17.47■□□□□ 0.39
RTN4R-204ENST00000463936 SLC9C2Q5TAH2 1124 aa17.47■□□□□ 0.39
RTN4R-204ENST00000463936 LHX8Q68G74 356 aa17.47■□□□□ 0.39
RTN4R-204ENST00000463936 LCORLQ8N3X6 602 aa17.47■□□□□ 0.39
RTN4R-204ENST00000463936 SLC44A5Q8NCS7 719 aa17.47■□□□□ 0.39
RTN4R-204ENST00000463936 SDR42E1Q8WUS8 393 aa17.47■□□□□ 0.39
RTN4R-204ENST00000463936 NUDT12Q9BQG2 462 aa17.47■□□□□ 0.39
RTN4R-204ENST00000463936 KIAA1683Q9H0B3 1180 aa17.47■□□□□ 0.39
RTN4R-204ENST00000463936 NR2E3Q9Y5X4 410 aa17.47■□□□□ 0.39
RTN4R-204ENST00000463936 PFASO15067 1338 aa17.47■□□□□ 0.39
RTN4R-204ENST00000463936 NAV1Q8NEY1 1877 aa17.46■□□□□ 0.39
RTN4R-204ENST00000463936 MAGEB6P1A0A0J9YX57 407 aa17.46■□□□□ 0.39
RTN4R-204ENST00000463936 GOLIM4O00461 696 aa17.46■□□□□ 0.39
RTN4R-204ENST00000463936 VCAM1P19320 739 aa17.46■□□□□ 0.39
RTN4R-204ENST00000463936 NECAB2Q7Z6G3 386 aa17.46■□□□□ 0.39
RTN4R-204ENST00000463936 ERC1Q8IUD2 1116 aa17.46■□□□□ 0.39
RTN4R-204ENST00000463936 USP17L15C9J2P7 530 aa17.45■□□□□ 0.38
RTN4R-204ENST00000463936 USP17L13C9JLJ4 530 aa17.45■□□□□ 0.38
RTN4R-204ENST00000463936 USP17L11C9JVI0 530 aa17.45■□□□□ 0.38
RTN4R-204ENST00000463936 USP17L18D6R9N7 530 aa17.45■□□□□ 0.38
RTN4R-204ENST00000463936 USP17L22D6RA61 530 aa17.45■□□□□ 0.38
RTN4R-204ENST00000463936 USP17L17D6RBQ6 530 aa17.45■□□□□ 0.38
RTN4R-204ENST00000463936 USP17L19D6RCP7 530 aa17.45■□□□□ 0.38
RTN4R-204ENST00000463936 USP17L20D6RJB6 530 aa17.45■□□□□ 0.38
RTN4R-204ENST00000463936 IGHA2P01877 340 aa17.45■□□□□ 0.38
RTN4R-204ENST00000463936 MAPK4P31152 587 aa17.45■□□□□ 0.38
RTN4R-204ENST00000463936 RRP1P56182 461 aaKnown RBP17.45■□□□□ 0.38
RTN4R-204ENST00000463936 USP17L24Q0WX57 530 aa17.45■□□□□ 0.38
RTN4R-204ENST00000463936 PLEKHH3Q7Z736 793 aa17.45■□□□□ 0.38
RTN4R-204ENST00000463936 TTC6Q86TZ1 520 aa17.45■□□□□ 0.38
RTN4R-204ENST00000463936 CLEC10AQ8IUN9 316 aa17.45■□□□□ 0.38
RTN4R-204ENST00000463936 DYNLL2Q96FJ2 89 aa17.45■□□□□ 0.38
RTN4R-204ENST00000463936 BCL11AQ9H165 835 aa17.45■□□□□ 0.38
RTN4R-204ENST00000463936 CHMP4BQ9H444 224 aaKnown RBP17.45■□□□□ 0.38
RTN4R-204ENST00000463936 DCP1AQ9NPI6 582 aaPredicted RBP17.45■□□□□ 0.38
RTN4R-204ENST00000463936 CYP2D7A0A087X1C5 515 aa17.44■□□□□ 0.38
RTN4R-204ENST00000463936 SPDYE16A6NNV3 312 aaPredicted RBP17.44■□□□□ 0.38
RTN4R-204ENST00000463936 COL6A1P12109 1028 aa17.44■□□□□ 0.38
RTN4R-204ENST00000463936 RPAP2Q8IXW5 612 aaPredicted RBP17.44■□□□□ 0.38
RTN4R-204ENST00000463936 C7orf61Q8IZ16 206 aa17.44■□□□□ 0.38
RTN4R-204ENST00000463936 ANKLE1Q8NAG6 615 aa17.44■□□□□ 0.38
RTN4R-204ENST00000463936 NPLOC4Q8TAT6 608 aa17.44■□□□□ 0.38
RTN4R-204ENST00000463936 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.44■□□□□ 0.38
RTN4R-204ENST00000463936 LRCH3Q96II8 777 aa17.44■□□□□ 0.38
RTN4R-204ENST00000463936 DNAJC2Q99543 621 aaKnown RBP17.44■□□□□ 0.38
RTN4R-204ENST00000463936 GDF15Q99988 308 aa17.44■□□□□ 0.38
RTN4R-204ENST00000463936 ARMT1Q9H993 441 aa17.44■□□□□ 0.38
RTN4R-204ENST00000463936 ZMYND8Q9ULU4 1186 aaPredicted RBP17.44■□□□□ 0.38
RTN4R-204ENST00000463936 RABGAP1Q9Y3P9 1069 aa17.44■□□□□ 0.38
RTN4R-204ENST00000463936 DNAH12Q6ZR08 3092 aa17.44■□□□□ 0.38
RTN4R-204ENST00000463936 POLR3DP05423 398 aaPredicted RBP17.43■□□□□ 0.38
RTN4R-204ENST00000463936 SYN1P17600 705 aa17.43■□□□□ 0.38
RTN4R-204ENST00000463936 LBX2Q6XYB7 198 aa17.43■□□□□ 0.38
RTN4R-204ENST00000463936 TRPV1Q8NER1 839 aa17.43■□□□□ 0.38
RTN4R-204ENST00000463936 SOCS4Q8WXH5 440 aa17.43■□□□□ 0.38
RTN4R-204ENST00000463936 KIF1BPQ96EK5 621 aa17.43■□□□□ 0.38
RTN4R-204ENST00000463936 FEZ1Q99689 392 aa17.43■□□□□ 0.38
RTN4R-204ENST00000463936 NBPF3Q9H094 633 aa17.43■□□□□ 0.38
RTN4R-204ENST00000463936 BOLA2Q9H3K6 86 aa17.43■□□□□ 0.38
RTN4R-204ENST00000463936 RPAP3Q9H6T3 665 aaPredicted RBP17.43■□□□□ 0.38
RTN4R-204ENST00000463936 MCM9Q9NXL9 1143 aa17.43■□□□□ 0.38
RTN4R-204ENST00000463936 BAZ2AQ9UIF9 1905 aaKnown RBP17.43■□□□□ 0.38
RTN4R-204ENST00000463936 CAPN2P17655 700 aa17.42■□□□□ 0.38
RTN4R-204ENST00000463936 PTPREP23469 700 aa17.42■□□□□ 0.38
RTN4R-204ENST00000463936 MAP2K5Q13163 448 aa17.42■□□□□ 0.38
RTN4R-204ENST00000463936 CERS3Q8IU89 383 aa17.42■□□□□ 0.38
RTN4R-204ENST00000463936 CLASRPQ8N2M8 674 aaKnown RBP17.42■□□□□ 0.38
RTN4R-204ENST00000463936 C11orf49Q9H6J7 331 aa17.42■□□□□ 0.38
RTN4R-204ENST00000463936 FRMPD3Q5JV73 1810 aa17.42■□□□□ 0.38
RTN4R-204ENST00000463936 COL6A3P12111 3177 aa17.41■□□□□ 0.38
RTN4R-204ENST00000463936 SMARCA5O60264 1052 aaPredicted RBP17.41■□□□□ 0.38
RTN4R-204ENST00000463936 ZKSCAN1P17029 563 aaPredicted RBP17.41■□□□□ 0.38
RTN4R-204ENST00000463936 ADD2P35612 726 aa17.41■□□□□ 0.38
RTN4R-204ENST00000463936 RGS2P41220 211 aa17.41■□□□□ 0.38
RTN4R-204ENST00000463936 TTF1Q15361 905 aaPredicted RBP17.41■□□□□ 0.38
RTN4R-204ENST00000463936 HSP90AB4PQ58FF6 505 aa17.41■□□□□ 0.38
RTN4R-204ENST00000463936 TMED8Q6PL24 325 aaPredicted RBP17.41■□□□□ 0.38
RTN4R-204ENST00000463936 APBA2Q99767 749 aa17.41■□□□□ 0.38
RTN4R-204ENST00000463936 CRNKL1Q9BZJ0 848 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms