RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 USP17L12C9JPN9 530 aa16.08■□□□□ 0.16
COMMD3-205ENST00000463688 USP17L21D6R901 530 aa16.08■□□□□ 0.16
COMMD3-205ENST00000463688 APPP05067 770 aa16.08■□□□□ 0.16
COMMD3-205ENST00000463688 SHMT1P34896 483 aa16.08■□□□□ 0.16
COMMD3-205ENST00000463688 TREML2Q5T2D2 321 aa16.08■□□□□ 0.16
COMMD3-205ENST00000463688 EDC3Q96F86 508 aaKnown RBP16.08■□□□□ 0.16
COMMD3-205ENST00000463688 MKNK2Q9HBH9 465 aa16.08■□□□□ 0.16
COMMD3-205ENST00000463688 STAP2Q9UGK3 403 aa16.08■□□□□ 0.16
COMMD3-205ENST00000463688 PATL2C9JE40 543 aaKnown RBP16.07■□□□□ 0.16
COMMD3-205ENST00000463688 TDO2P48775 406 aa16.07■□□□□ 0.16
COMMD3-205ENST00000463688 MFAP1P55081 439 aaKnown RBP16.07■□□□□ 0.16
COMMD3-205ENST00000463688 HERVK_113P62684 666 aa16.07■□□□□ 0.16
COMMD3-205ENST00000463688 C16orf86Q6ZW13 317 aa16.07■□□□□ 0.16
COMMD3-205ENST00000463688 MB21D1Q8N884 522 aa16.07■□□□□ 0.16
COMMD3-205ENST00000463688 RABGAP1Q9Y3P9 1069 aa16.07■□□□□ 0.16
COMMD3-205ENST00000463688 DOCK1Q14185 1865 aa16.07■□□□□ 0.16
COMMD3-205ENST00000463688 PDE4BQ07343 736 aa16.06■□□□□ 0.16
COMMD3-205ENST00000463688 RRP1BQ14684 758 aaKnown RBP16.06■□□□□ 0.16
COMMD3-205ENST00000463688 PUS7LQ9H0K6 701 aaKnown RBP16.06■□□□□ 0.16
COMMD3-205ENST00000463688 SYNPO2Q9UMS6 1093 aa16.06■□□□□ 0.16
COMMD3-205ENST00000463688 GPAA1O43292 621 aa16.05■□□□□ 0.16
COMMD3-205ENST00000463688 NT5C2P49902 561 aa16.05■□□□□ 0.16
COMMD3-205ENST00000463688 COG2Q14746 738 aa16.05■□□□□ 0.16
COMMD3-205ENST00000463688 LBX2Q6XYB7 198 aa16.05■□□□□ 0.16
COMMD3-205ENST00000463688 CCDC84Q86UT8 332 aaPredicted RBP16.05■□□□□ 0.16
COMMD3-205ENST00000463688 ZNF444Q8N0Y2 327 aaPredicted RBP16.05■□□□□ 0.16
COMMD3-205ENST00000463688 GOPCQ9HD26 462 aa16.05■□□□□ 0.16
COMMD3-205ENST00000463688 EMILIN3Q9NT22 766 aa16.05■□□□□ 0.16
COMMD3-205ENST00000463688 HIP1O00291 1037 aa16.04■□□□□ 0.16
COMMD3-205ENST00000463688 ADCY3O60266 1144 aa16.04■□□□□ 0.16
COMMD3-205ENST00000463688 SLURP2P0DP57 97 aa16.04■□□□□ 0.16
COMMD3-205ENST00000463688 CDK8P49336 464 aa16.04■□□□□ 0.16
COMMD3-205ENST00000463688 FLT3LGP49771 235 aa16.04■□□□□ 0.16
COMMD3-205ENST00000463688 ICA1Q05084 483 aa16.04■□□□□ 0.16
COMMD3-205ENST00000463688 PRKCZQ05513 592 aa16.04■□□□□ 0.16
COMMD3-205ENST00000463688 CTR9Q6PD62 1173 aa16.04■□□□□ 0.16
COMMD3-205ENST00000463688 CATSPERGQ6ZRH7 1159 aa16.04■□□□□ 0.16
COMMD3-205ENST00000463688 PI4K2BQ8TCG2 481 aa16.04■□□□□ 0.16
COMMD3-205ENST00000463688 P2RX7Q99572 595 aaKnown RBP16.04■□□□□ 0.16
COMMD3-205ENST00000463688 NUDT12Q9BQG2 462 aa16.04■□□□□ 0.16
COMMD3-205ENST00000463688 ARHGAP39Q9C0H5 1083 aa16.04■□□□□ 0.16
COMMD3-205ENST00000463688 NAPBQ9H115 298 aa16.04■□□□□ 0.16
COMMD3-205ENST00000463688 SLC5A4Q9NY91 659 aa16.04■□□□□ 0.16
COMMD3-205ENST00000463688 XRCC5P13010 732 aaKnown RBP16.03■□□□□ 0.16
COMMD3-205ENST00000463688 VCAM1P19320 739 aa16.03■□□□□ 0.16
COMMD3-205ENST00000463688 COPB2P35606 906 aa16.03■□□□□ 0.16
COMMD3-205ENST00000463688 SEPT2Q15019 361 aa16.03■□□□□ 0.16
COMMD3-205ENST00000463688 SMC5Q8IY18 1101 aa16.03■□□□□ 0.16
COMMD3-205ENST00000463688 HELLSQ9NRZ9 838 aa16.03■□□□□ 0.16
COMMD3-205ENST00000463688 TMX2Q9Y320 296 aa16.03■□□□□ 0.16
COMMD3-205ENST00000463688 IVNS1ABPQ9Y6Y0 642 aa16.03■□□□□ 0.16
COMMD3-205ENST00000463688 PRKAB2O43741 272 aa16.02■□□□□ 0.16
COMMD3-205ENST00000463688 GJB1P08034 283 aa16.02■□□□□ 0.16
COMMD3-205ENST00000463688 PDE1AP54750 535 aa16.02■□□□□ 0.16
COMMD3-205ENST00000463688 ERVK-9P63128 1117 aa16.02■□□□□ 0.16
COMMD3-205ENST00000463688 ERVK-24P63145 666 aa16.02■□□□□ 0.16
COMMD3-205ENST00000463688 OSBP2Q969R2 916 aa16.02■□□□□ 0.16
COMMD3-205ENST00000463688 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.02■□□□□ 0.16
COMMD3-205ENST00000463688 GSG1L2A8MUP6 293 aa16.02■□□□□ 0.15
COMMD3-205ENST00000463688 MINDY4BA8MYZ0 360 aa16.02■□□□□ 0.15
COMMD3-205ENST00000463688 WDR46O15213 610 aaKnown RBP16.02■□□□□ 0.15
COMMD3-205ENST00000463688 RGS2P41220 211 aa16.02■□□□□ 0.15
COMMD3-205ENST00000463688 ZMYM1Q5SVZ6 1142 aa16.02■□□□□ 0.15
COMMD3-205ENST00000463688 RPAP3Q9H6T3 665 aaPredicted RBP16.02■□□□□ 0.15
COMMD3-205ENST00000463688 STRNO43815 780 aa16.01■□□□□ 0.15
COMMD3-205ENST00000463688 HMGCRP04035 888 aa16.01■□□□□ 0.15
COMMD3-205ENST00000463688 ZYXQ15942 572 aaKnown RBP16.01■□□□□ 0.15
COMMD3-205ENST00000463688 PLEKHH3Q7Z736 793 aa16.01■□□□□ 0.15
COMMD3-205ENST00000463688 CHD1LQ86WJ1 897 aa16.01■□□□□ 0.15
COMMD3-205ENST00000463688 IFNL3Q8IZI9 196 aa16.01■□□□□ 0.15
COMMD3-205ENST00000463688 SH3TC2Q8TF17 1288 aa16.01■□□□□ 0.15
COMMD3-205ENST00000463688 TANGO6Q9C0B7 1094 aa16.01■□□□□ 0.15
COMMD3-205ENST00000463688 RNF208Q9H0X6 261 aa16.01■□□□□ 0.15
COMMD3-205ENST00000463688 VCPKMTQ9H867 229 aa16.01■□□□□ 0.15
COMMD3-205ENST00000463688 PCP11498 1178 aaKnown RBP16■□□□□ 0.15
COMMD3-205ENST00000463688 JAG1P78504 1218 aa16■□□□□ 0.15
COMMD3-205ENST00000463688 PRPF38BQ5VTL8 546 aaKnown RBP16■□□□□ 0.15
COMMD3-205ENST00000463688 TSHZ3Q63HK5 1081 aa16■□□□□ 0.15
COMMD3-205ENST00000463688 ACER1Q8TDN7 264 aa16■□□□□ 0.15
COMMD3-205ENST00000463688 OSBPL3Q9H4L5 887 aa16■□□□□ 0.15
COMMD3-205ENST00000463688 NYAP2Q9P242 653 aa16■□□□□ 0.15
COMMD3-205ENST00000463688 RBPJLQ9UBG7 517 aa16■□□□□ 0.15
COMMD3-205ENST00000463688 FOCADQ5VW36 1801 aa16■□□□□ 0.15
COMMD3-205ENST00000463688 TRIM6-TRIM34B2RNG4 842 aa15.99■□□□□ 0.15
COMMD3-205ENST00000463688 FDX1P10109 184 aa15.99■□□□□ 0.15
COMMD3-205ENST00000463688 CYP2D6P10635 497 aa15.99■□□□□ 0.15
COMMD3-205ENST00000463688 AKR1B1P15121 316 aa15.99■□□□□ 0.15
COMMD3-205ENST00000463688 GJA8P48165 433 aa15.99■□□□□ 0.15
COMMD3-205ENST00000463688 ATP2B2Q01814 1243 aa15.99■□□□□ 0.15
COMMD3-205ENST00000463688 NUCB1Q02818 461 aa15.99■□□□□ 0.15
COMMD3-205ENST00000463688 MCMDC2Q4G0Z9 681 aa15.99■□□□□ 0.15
COMMD3-205ENST00000463688 SHCBP1Q8NEM2 672 aa15.99■□□□□ 0.15
COMMD3-205ENST00000463688 DYNLL2Q96FJ2 89 aa15.99■□□□□ 0.15
COMMD3-205ENST00000463688 PAGR1Q9BTK6 254 aa15.99■□□□□ 0.15
COMMD3-205ENST00000463688 HTATIP2Q9BUP3 242 aa15.99■□□□□ 0.15
COMMD3-205ENST00000463688 MROH8Q9H579 483 aa15.99■□□□□ 0.15
COMMD3-205ENST00000463688 SUPT16HQ9Y5B9 1047 aaKnown RBP15.99■□□□□ 0.15
COMMD3-205ENST00000463688 ROBO3Q96MS0 1386 aa15.99■□□□□ 0.15
COMMD3-205ENST00000463688 MYH1P12882 1939 aa15.98■□□□□ 0.15
COMMD3-205ENST00000463688 SLC15A5A6NIM6 579 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms