RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 UTRNP46939 3433 aa22.13■■□□□ 1.13
CCDC78-206ENST00000463539 AKR1B1P15121 316 aa22.13■■□□□ 1.13
CCDC78-206ENST00000463539 FOSBP53539 338 aa22.13■■□□□ 1.13
CCDC78-206ENST00000463539 MCTP1Q6DN14 999 aa22.13■■□□□ 1.13
CCDC78-206ENST00000463539 FOXP4Q8IVH2 680 aaPredicted RBP22.13■■□□□ 1.13
CCDC78-206ENST00000463539 CTCFLQ8NI51 663 aaPredicted RBP22.13■■□□□ 1.13
CCDC78-206ENST00000463539 FAM151AQ8WW52 585 aa22.13■■□□□ 1.13
CCDC78-206ENST00000463539 CEP95Q96GE4 821 aa22.13■■□□□ 1.13
CCDC78-206ENST00000463539 CSRNP1Q96S65 589 aa22.13■■□□□ 1.13
CCDC78-206ENST00000463539 DNAJC18Q9H819 358 aa22.13■■□□□ 1.13
CCDC78-206ENST00000463539 STK36Q9NRP7 1315 aa22.13■■□□□ 1.13
CCDC78-206ENST00000463539 SSRP1Q08945 709 aaKnown RBP22.13■■□□□ 1.13
CCDC78-206ENST00000463539 NBPF9Q3BBW0 867 aa22.13■■□□□ 1.13
CCDC78-206ENST00000463539 FMNL1O95466 1100 aaPredicted RBP22.12■■□□□ 1.13
CCDC78-206ENST00000463539 FOXD4L6Q3SYB3 417 aaPredicted RBP22.12■■□□□ 1.13
CCDC78-206ENST00000463539 FOXD4L3Q6VB84 417 aaPredicted RBP22.12■■□□□ 1.13
CCDC78-206ENST00000463539 FERMT3Q86UX7 667 aa22.12■■□□□ 1.13
CCDC78-206ENST00000463539 TRIM22Q8IYM9 498 aa22.12■■□□□ 1.13
CCDC78-206ENST00000463539 TMEM47Q9BQJ4 181 aa22.12■■□□□ 1.13
CCDC78-206ENST00000463539 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.12■■□□□ 1.13
CCDC78-206ENST00000463539 SLC26A6Q9BXS9 759 aa22.12■■□□□ 1.13
CCDC78-206ENST00000463539 CNOT7Q9UIV1 285 aaKnown RBP22.12■■□□□ 1.13
CCDC78-206ENST00000463539 YBX3P16989 372 aaKnown RBP eCLIP22.11■■□□□ 1.13
CCDC78-206ENST00000463539 METTL16Q86W50 562 aaKnown RBP22.11■■□□□ 1.13
CCDC78-206ENST00000463539 CHAMP1Q96JM3 812 aa22.11■■□□□ 1.13
CCDC78-206ENST00000463539 C8orf76Q96K31 380 aa22.11■■□□□ 1.13
CCDC78-206ENST00000463539 CCDC17Q96LX7 622 aa22.11■■□□□ 1.13
CCDC78-206ENST00000463539 CNTNAP1P78357 1384 aa22.11■■□□□ 1.13
CCDC78-206ENST00000463539 FAM196BA6NMK8 535 aa22.1■■□□□ 1.13
CCDC78-206ENST00000463539 SLURP2P0DP57 97 aa22.1■■□□□ 1.13
CCDC78-206ENST00000463539 PTMSP20962 102 aa22.1■■□□□ 1.13
CCDC78-206ENST00000463539 KIF5BP33176 963 aa22.1■■□□□ 1.13
CCDC78-206ENST00000463539 RBM26Q5T8P6 1007 aaKnown RBP22.1■■□□□ 1.13
CCDC78-206ENST00000463539 FAM83AQ86UY5 434 aa22.1■■□□□ 1.13
CCDC78-206ENST00000463539 CMTR1Q8N1G2 835 aaKnown RBP22.1■■□□□ 1.13
CCDC78-206ENST00000463539 MPHOSPH10O00566 681 aaKnown RBP22.1■■□□□ 1.13
CCDC78-206ENST00000463539 TOP1P11387 765 aaKnown RBP22.1■■□□□ 1.13
CCDC78-206ENST00000463539 NOVP48745 357 aa22.1■■□□□ 1.13
CCDC78-206ENST00000463539 TMTC3Q6ZXV5 915 aa22.1■■□□□ 1.13
CCDC78-206ENST00000463539 GPC2Q8N158 579 aa22.1■■□□□ 1.13
CCDC78-206ENST00000463539 CCDC82Q8N4S0 544 aa22.1■■□□□ 1.13
CCDC78-206ENST00000463539 WASF1Q92558 559 aa22.1■■□□□ 1.13
CCDC78-206ENST00000463539 MAP3K14Q99558 947 aa22.1■■□□□ 1.13
CCDC78-206ENST00000463539 ALG1Q9BT22 464 aa22.1■■□□□ 1.13
CCDC78-206ENST00000463539 MTMR4Q9NYA4 1195 aa22.1■■□□□ 1.13
CCDC78-206ENST00000463539 IGKV6D-41A0A0C4DH26 115 aa22.09■■□□□ 1.13
CCDC78-206ENST00000463539 EGFRP00533 1210 aa22.09■■□□□ 1.13
CCDC78-206ENST00000463539 CERKLQ49MI3 558 aaPredicted RBP22.09■■□□□ 1.13
CCDC78-206ENST00000463539 TATDN1Q6P1N9 297 aa22.09■■□□□ 1.13
CCDC78-206ENST00000463539 NBPF11Q86T75 865 aa22.09■■□□□ 1.13
CCDC78-206ENST00000463539 PLEKHA8P1O95397 391 aa22.08■■□□□ 1.13
CCDC78-206ENST00000463539 GUCY1B3Q02153 619 aa22.08■■□□□ 1.13
CCDC78-206ENST00000463539 SAMD7Q7Z3H4 446 aa22.08■■□□□ 1.13
CCDC78-206ENST00000463539 FBXO18Q8NFZ0 1043 aa22.08■■□□□ 1.13
CCDC78-206ENST00000463539 HERC5Q9UII4 1024 aaKnown RBP22.08■■□□□ 1.13
CCDC78-206ENST00000463539 SIPA1L1O43166 1804 aa22.08■■□□□ 1.13
CCDC78-206ENST00000463539 TNNI2P48788 182 aa22.08■■□□□ 1.12
CCDC78-206ENST00000463539 TBC1D10BQ4KMP7 808 aaPredicted RBP22.08■■□□□ 1.12
CCDC78-206ENST00000463539 PPP4R3BQ5MIZ7 849 aa22.08■■□□□ 1.12
CCDC78-206ENST00000463539 RGS22Q8NE09 1264 aa22.08■■□□□ 1.12
CCDC78-206ENST00000463539 RNF26Q9BY78 433 aaPredicted RBP22.08■■□□□ 1.12
CCDC78-206ENST00000463539 TMEM39BQ9GZU3 492 aa22.08■■□□□ 1.12
CCDC78-206ENST00000463539 ZSCAN16Q9H4T2 348 aaPredicted RBP22.08■■□□□ 1.12
CCDC78-206ENST00000463539 RNF181Q9P0P0 153 aa22.08■■□□□ 1.12
CCDC78-206ENST00000463539 H7C1D1 291 aa22.07■■□□□ 1.12
CCDC78-206ENST00000463539 DEXIO95424 95 aa22.07■■□□□ 1.12
CCDC78-206ENST00000463539 TTLL1O95922 423 aa22.07■■□□□ 1.12
CCDC78-206ENST00000463539 AKAP17AQ02040 695 aaKnown RBP22.07■■□□□ 1.12
CCDC78-206ENST00000463539 RESTQ13127 1097 aa22.07■■□□□ 1.12
CCDC78-206ENST00000463539 GRM4Q14833 912 aa22.07■■□□□ 1.12
CCDC78-206ENST00000463539 KIF4BQ2VIQ3 1234 aa22.07■■□□□ 1.12
CCDC78-206ENST00000463539 AIFM3Q96NN9 605 aa22.07■■□□□ 1.12
CCDC78-206ENST00000463539 FUT2Q10981 343 aa22.06■■□□□ 1.12
CCDC78-206ENST00000463539 TNFAIP1Q13829 316 aa22.06■■□□□ 1.12
CCDC78-206ENST00000463539 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.06■■□□□ 1.12
CCDC78-206ENST00000463539 TRIM29Q14134 588 aa22.06■■□□□ 1.12
CCDC78-206ENST00000463539 OTUD7BQ6GQQ9 843 aa22.06■■□□□ 1.12
CCDC78-206ENST00000463539 CLEC10AQ8IUN9 316 aa22.06■■□□□ 1.12
CCDC78-206ENST00000463539 GPRC5DQ9NZD1 345 aa22.06■■□□□ 1.12
CCDC78-206ENST00000463539 MTMR7Q9Y216 660 aa22.06■■□□□ 1.12
CCDC78-206ENST00000463539 UBE2Q2LH0YL09 131 aa22.05■■□□□ 1.12
CCDC78-206ENST00000463539 NCLP19338 710 aaKnown RBP22.05■■□□□ 1.12
CCDC78-206ENST00000463539 GNAQP50148 359 aa22.05■■□□□ 1.12
CCDC78-206ENST00000463539 DNM1Q05193 864 aaKnown RBP22.05■■□□□ 1.12
CCDC78-206ENST00000463539 GJB4Q9NTQ9 266 aa22.05■■□□□ 1.12
CCDC78-206ENST00000463539 CNTNAP5Q8WYK1 1306 aa22.04■■□□□ 1.12
CCDC78-206ENST00000463539 GUCY1A2P33402 732 aa22.04■■□□□ 1.12
CCDC78-206ENST00000463539 ABCB5Q2M3G0 1257 aa22.04■■□□□ 1.12
CCDC78-206ENST00000463539 SRBD1Q8N5C6 995 aaKnown RBP22.04■■□□□ 1.12
CCDC78-206ENST00000463539 CLIP2Q9UDT6 1046 aa22.04■■□□□ 1.12
CCDC78-206ENST00000463539 MAD2L2Q9UI95 211 aa22.04■■□□□ 1.12
CCDC78-206ENST00000463539 PRPF3O43395 683 aaKnown RBP22.03■■□□□ 1.12
CCDC78-206ENST00000463539 GDF11O95390 407 aa22.03■■□□□ 1.12
CCDC78-206ENST00000463539 RASA3Q14644 834 aa22.03■■□□□ 1.12
CCDC78-206ENST00000463539 TMEM179Q6ZVK1 233 aa22.03■■□□□ 1.12
CCDC78-206ENST00000463539 LRRC47Q8N1G4 583 aaKnown RBP22.03■■□□□ 1.12
CCDC78-206ENST00000463539 KANSL2Q9H9L4 492 aa22.03■■□□□ 1.12
CCDC78-206ENST00000463539 CNPY2Q9Y2B0 182 aa22.03■■□□□ 1.12
CCDC78-206ENST00000463539 PRPF40AO75400 957 aaKnown RBP22.03■■□□□ 1.12
CCDC78-206ENST00000463539 KRT40Q6A162 431 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms