RNA–Protein interactions for RNA: ENST00000462996.1

PTPN18-208, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-208ENST00000462996 CYP2C19P33261 490 aa24.78■■□□□ 1.56
PTPN18-208ENST00000462996 CCNA1P78396 465 aa24.78■■□□□ 1.56
PTPN18-208ENST00000462996 ATP2B2Q01814 1243 aa24.78■■□□□ 1.56
PTPN18-208ENST00000462996 MTX1Q13505 466 aa24.78■■□□□ 1.56
PTPN18-208ENST00000462996 ZYXQ15942 572 aaKnown RBP24.78■■□□□ 1.56
PTPN18-208ENST00000462996 WDR78Q5VTH9 848 aa24.78■■□□□ 1.56
PTPN18-208ENST00000462996 MYLIPQ8WY64 445 aa24.78■■□□□ 1.56
PTPN18-208ENST00000462996 C12orf42Q96LP6 360 aa24.78■■□□□ 1.56
PTPN18-208ENST00000462996 TTYH1Q9H313 450 aaPredicted RBP24.78■■□□□ 1.56
PTPN18-208ENST00000462996 SAP30BPQ9UHR5 308 aaKnown RBP24.78■■□□□ 1.56
PTPN18-208ENST00000462996 USP17L15C9J2P7 530 aa24.77■■□□□ 1.56
PTPN18-208ENST00000462996 USP17L13C9JLJ4 530 aa24.77■■□□□ 1.56
PTPN18-208ENST00000462996 USP17L11C9JVI0 530 aa24.77■■□□□ 1.56
PTPN18-208ENST00000462996 USP17L18D6R9N7 530 aa24.77■■□□□ 1.56
PTPN18-208ENST00000462996 USP17L22D6RA61 530 aa24.77■■□□□ 1.56
PTPN18-208ENST00000462996 USP17L17D6RBQ6 530 aa24.77■■□□□ 1.56
PTPN18-208ENST00000462996 USP17L19D6RCP7 530 aa24.77■■□□□ 1.56
PTPN18-208ENST00000462996 USP17L20D6RJB6 530 aa24.77■■□□□ 1.56
PTPN18-208ENST00000462996 GH2P01242 217 aa24.77■■□□□ 1.56
PTPN18-208ENST00000462996 USP17L24Q0WX57 530 aa24.77■■□□□ 1.56
PTPN18-208ENST00000462996 GJC2Q5T442 439 aaPredicted RBP24.77■■□□□ 1.56
PTPN18-208ENST00000462996 SNRKQ9NRH2 765 aa24.77■■□□□ 1.56
PTPN18-208ENST00000462996 MYO5AQ9Y4I1 1855 aaKnown RBP24.77■■□□□ 1.56
PTPN18-208ENST00000462996 GRB14Q14449 540 aa24.76■■□□□ 1.55
PTPN18-208ENST00000462996 SLC39A5Q6ZMH5 540 aa24.76■■□□□ 1.55
PTPN18-208ENST00000462996 CATSPERGQ6ZRH7 1159 aa24.76■■□□□ 1.55
PTPN18-208ENST00000462996 CDCA7LQ96GN5 454 aa24.76■■□□□ 1.55
PTPN18-208ENST00000462996 API5Q9BZZ5 524 aaKnown RBP24.76■■□□□ 1.55
PTPN18-208ENST00000462996 BTBD7Q9P203 1132 aa24.76■■□□□ 1.55
PTPN18-208ENST00000462996 TTC28Q96AY4 2481 aa24.76■■□□□ 1.55
PTPN18-208ENST00000462996 UQCRFS1P1P0C7P4 283 aa24.75■■□□□ 1.55
PTPN18-208ENST00000462996 CYBAP13498 195 aa24.75■■□□□ 1.55
PTPN18-208ENST00000462996 BADQ92934 168 aa24.75■■□□□ 1.55
PTPN18-208ENST00000462996 SMAD3P84022 425 aaKnown RBP24.74■■□□□ 1.55
PTPN18-208ENST00000462996 PRDM5Q9NQX1 630 aaPredicted RBP24.74■■□□□ 1.55
PTPN18-208ENST00000462996 LBX2Q6XYB7 198 aa24.73■■□□□ 1.55
PTPN18-208ENST00000462996 FEZ1Q99689 392 aa24.73■■□□□ 1.55
PTPN18-208ENST00000462996 IVNS1ABPQ9Y6Y0 642 aa24.73■■□□□ 1.55
PTPN18-208ENST00000462996 HLA-DOAP06340 250 aa24.72■■□□□ 1.55
PTPN18-208ENST00000462996 GNAI3P08754 354 aa24.72■■□□□ 1.55
PTPN18-208ENST00000462996 VCAM1P19320 739 aa24.72■■□□□ 1.55
PTPN18-208ENST00000462996 DYNLL1P63167 89 aaKnown RBP24.72■■□□□ 1.55
PTPN18-208ENST00000462996 TRIM60Q495X7 471 aa24.72■■□□□ 1.55
PTPN18-208ENST00000462996 ANO1Q5XXA6 986 aa24.72■■□□□ 1.55
PTPN18-208ENST00000462996 TATDN1Q6P1N9 297 aa24.72■■□□□ 1.55
PTPN18-208ENST00000462996 SH3RF1Q7Z6J0 888 aa24.72■■□□□ 1.55
PTPN18-208ENST00000462996 ARRDC4Q8NCT1 418 aa24.72■■□□□ 1.55
PTPN18-208ENST00000462996 ACER1Q8TDN7 264 aa24.72■■□□□ 1.55
PTPN18-208ENST00000462996 MYH1P12882 1939 aa24.72■■□□□ 1.55
PTPN18-208ENST00000462996 TRIM43BA6NCK2 446 aa24.71■■□□□ 1.55
PTPN18-208ENST00000462996 CYP2E1P05181 493 aaPredicted RBP24.71■■□□□ 1.55
PTPN18-208ENST00000462996 SNX17Q15036 470 aa24.71■■□□□ 1.55
PTPN18-208ENST00000462996 TRIM43Q96BQ3 446 aaPredicted RBP24.71■■□□□ 1.55
PTPN18-208ENST00000462996 KIAA1683Q9H0B3 1180 aa24.71■■□□□ 1.55
PTPN18-208ENST00000462996 PDLIM7Q9NR12 457 aa24.71■■□□□ 1.55
PTPN18-208ENST00000462996 SPDYE16A6NNV3 312 aaPredicted RBP24.7■■□□□ 1.54
PTPN18-208ENST00000462996 FOSL2P15408 326 aa24.7■■□□□ 1.54
PTPN18-208ENST00000462996 ATF7IPQ6VMQ6 1270 aa24.7■■□□□ 1.54
PTPN18-208ENST00000462996 TRMT2AQ8IZ69 625 aaKnown RBP24.7■■□□□ 1.54
PTPN18-208ENST00000462996 PNMA6EA0A0J9YXQ4 647 aa24.69■■□□□ 1.54
PTPN18-208ENST00000462996 KBTBD13C9JR72 458 aa24.69■■□□□ 1.54
PTPN18-208ENST00000462996 USP14P54578 494 aa24.69■■□□□ 1.54
PTPN18-208ENST00000462996 G3BP1Q13283 466 aaKnown RBP eCLIP24.69■■□□□ 1.54
PTPN18-208ENST00000462996 RAB3GAP1Q15042 981 aa24.69■■□□□ 1.54
PTPN18-208ENST00000462996 TTC39AQ5SRH9 613 aa24.68■■□□□ 1.54
PTPN18-208ENST00000462996 OLFML2BQ68BL8 750 aa24.68■■□□□ 1.54
PTPN18-208ENST00000462996 DPP9Q86TI2 863 aa24.68■■□□□ 1.54
PTPN18-208ENST00000462996 SYMPKQ92797 1274 aaKnown RBP24.68■■□□□ 1.54
PTPN18-208ENST00000462996 RPAP3Q9H6T3 665 aaPredicted RBP24.68■■□□□ 1.54
PTPN18-208ENST00000462996 ADORA2AP29274 412 aa24.67■■□□□ 1.54
PTPN18-208ENST00000462996 ADCYAP1R1P41586 468 aa24.67■■□□□ 1.54
PTPN18-208ENST00000462996 PIH1D3Q9NQM4 214 aaKnown RBP24.67■■□□□ 1.54
PTPN18-208ENST00000462996 ZNF236Q9UL36 1845 aa24.66■■□□□ 1.54
PTPN18-208ENST00000462996 SEPT4O43236 478 aa24.66■■□□□ 1.54
PTPN18-208ENST00000462996 MYCNP04198 464 aaPredicted RBP24.66■■□□□ 1.54
PTPN18-208ENST00000462996 ITGB8P26012 769 aa24.66■■□□□ 1.54
PTPN18-208ENST00000462996 ZAP70P43403 619 aa24.66■■□□□ 1.54
PTPN18-208ENST00000462996 PRAMEF19Q5SWL8 479 aa24.66■■□□□ 1.54
PTPN18-208ENST00000462996 FERMT2Q96AC1 680 aa24.66■■□□□ 1.54
PTPN18-208ENST00000462996 DBNDD2Q9BQY9 259 aa24.66■■□□□ 1.54
PTPN18-208ENST00000462996 MOV10L1Q9BXT6 1211 aaKnown RBP24.66■■□□□ 1.54
PTPN18-208ENST00000462996 SERPINB13Q9UIV8 391 aa24.66■■□□□ 1.54
PTPN18-208ENST00000462996 COBLO75128 1261 aa24.65■■□□□ 1.54
PTPN18-208ENST00000462996 CT47B1P0C2W7 299 aaPredicted RBP24.65■■□□□ 1.54
PTPN18-208ENST00000462996 EPHB4P54760 987 aa24.65■■□□□ 1.54
PTPN18-208ENST00000462996 LRRC41Q15345 812 aa24.65■■□□□ 1.54
PTPN18-208ENST00000462996 ABCB5Q2M3G0 1257 aa24.65■■□□□ 1.54
PTPN18-208ENST00000462996 CERKLQ49MI3 558 aaPredicted RBP24.65■■□□□ 1.54
PTPN18-208ENST00000462996 C1orf53Q5VUE5 145 aa24.65■■□□□ 1.54
PTPN18-208ENST00000462996 SMCHD1A6NHR9 2005 aa24.64■■□□□ 1.54
PTPN18-208ENST00000462996 STRNO43815 780 aa24.64■■□□□ 1.54
PTPN18-208ENST00000462996 CYP7A1P22680 504 aa24.64■■□□□ 1.54
PTPN18-208ENST00000462996 GUCY1A2P33402 732 aa24.64■■□□□ 1.54
PTPN18-208ENST00000462996 TLE2Q04725 743 aa24.64■■□□□ 1.54
PTPN18-208ENST00000462996 TNNI3KQ59H18 835 aa24.64■■□□□ 1.54
PTPN18-208ENST00000462996 CCDC158Q5M9N0 1113 aa24.64■■□□□ 1.54
PTPN18-208ENST00000462996 USP38Q8NB14 1042 aa24.64■■□□□ 1.54
PTPN18-208ENST00000462996 EHD4Q9H223 541 aa24.64■■□□□ 1.54
PTPN18-208ENST00000462996 FPGT-TNNI3KV9GXZ4 949 aa24.64■■□□□ 1.54
PTPN18-208ENST00000462996 MIGA1Q8NAN2 632 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms