RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 ASXL1Q8IXJ9 1541 aa9.95□□□□□ -0.82
UBE4B-204ENST00000462658 LRRC7Q96NW7 1537 aa9.94□□□□□ -0.82
UBE4B-204ENST00000462658 IQSEC2Q5JU85 1478 aa9.94□□□□□ -0.82
UBE4B-204ENST00000462658 LRPPRCP42704 1394 aaKnown RBP9.94□□□□□ -0.82
UBE4B-204ENST00000462658 SBNO2Q9Y2G9 1366 aa9.94□□□□□ -0.82
UBE4B-204ENST00000462658 ZNF862O60290 1169 aa9.94□□□□□ -0.82
UBE4B-204ENST00000462658 GATA4P43694 442 aa9.94□□□□□ -0.82
UBE4B-204ENST00000462658 NUTM2GQ5VZR2 741 aa9.94□□□□□ -0.82
UBE4B-204ENST00000462658 LLGL2Q6P1M3 1020 aa9.94□□□□□ -0.82
UBE4B-204ENST00000462658 COPRSQ9NQ92 184 aa9.94□□□□□ -0.82
UBE4B-204ENST00000462658 POGKQ9P215 609 aa9.94□□□□□ -0.82
UBE4B-204ENST00000462658 METP08581 1390 aa9.93□□□□□ -0.82
UBE4B-204ENST00000462658 MEGF11A6BM72 1044 aa9.93□□□□□ -0.82
UBE4B-204ENST00000462658 GPBAR1Q8TDU6 330 aa9.93□□□□□ -0.82
UBE4B-204ENST00000462658 PRAM1Q96QH2 718 aa9.93□□□□□ -0.82
UBE4B-204ENST00000462658 UBL7Q96S82 380 aaPredicted RBP9.93□□□□□ -0.82
UBE4B-204ENST00000462658 WDR18Q9BV38 432 aa9.93□□□□□ -0.82
UBE4B-204ENST00000462658 RAD18Q9NS91 495 aa9.93□□□□□ -0.82
UBE4B-204ENST00000462658 TBX22Q9Y458 520 aa9.93□□□□□ -0.82
UBE4B-204ENST00000462658 PCDHB5Q9Y5E4 795 aa9.93□□□□□ -0.82
UBE4B-204ENST00000462658 NWD1Q149M9 1564 aa9.92□□□□□ -0.82
UBE4B-204ENST00000462658 ADAMTS13Q76LX8 1427 aa9.92□□□□□ -0.82
UBE4B-204ENST00000462658 ABCC11Q96J66 1382 aa9.92□□□□□ -0.82
UBE4B-204ENST00000462658 DRD2P14416 443 aa9.92□□□□□ -0.82
UBE4B-204ENST00000462658 FANCCQ00597 558 aa9.92□□□□□ -0.82
UBE4B-204ENST00000462658 SAFB2Q14151 953 aaKnown RBP eCLIP9.92□□□□□ -0.82
UBE4B-204ENST00000462658 AKAP4Q5JQC9 854 aa9.92□□□□□ -0.82
UBE4B-204ENST00000462658 FDX2Q6P4F2 183 aa9.92□□□□□ -0.82
UBE4B-204ENST00000462658 Q6ZS46 218 aa9.92□□□□□ -0.82
UBE4B-204ENST00000462658 C12orf50Q8NA57 414 aaPredicted RBP9.92□□□□□ -0.82
UBE4B-204ENST00000462658 SLC26A8Q96RN1 970 aa9.92□□□□□ -0.82
UBE4B-204ENST00000462658 SETD1AO15047 1707 aaKnown RBP9.92□□□□□ -0.82
UBE4B-204ENST00000462658 CPS1P31327 1500 aa9.92□□□□□ -0.82
UBE4B-204ENST00000462658 CHD2O14647 1828 aaKnown RBP9.91□□□□□ -0.82
UBE4B-204ENST00000462658 AOC2O75106 756 aa9.91□□□□□ -0.82
UBE4B-204ENST00000462658 TFE3P19532 575 aaPredicted RBP9.91□□□□□ -0.82
UBE4B-204ENST00000462658 ZNF76P36508 570 aa9.91□□□□□ -0.82
UBE4B-204ENST00000462658 PTPN11Q06124 597 aaPredicted RBP9.91□□□□□ -0.82
UBE4B-204ENST00000462658 LRRC14Q15048 493 aa9.91□□□□□ -0.82
UBE4B-204ENST00000462658 GPAT2Q6NUI2 795 aa9.91□□□□□ -0.82
UBE4B-204ENST00000462658 AGMOQ6ZNB7 445 aa9.91□□□□□ -0.82
UBE4B-204ENST00000462658 PHC3Q8NDX5 983 aa9.91□□□□□ -0.82
UBE4B-204ENST00000462658 CYP4F12Q9HCS2 524 aa9.91□□□□□ -0.82
UBE4B-204ENST00000462658 KRT82Q9NSB4 513 aa9.91□□□□□ -0.82
UBE4B-204ENST00000462658 KBTBD4Q9NVX7 518 aa9.91□□□□□ -0.82
UBE4B-204ENST00000462658 GGT7Q9UJ14 662 aa9.91□□□□□ -0.82
UBE4B-204ENST00000462658 CYP8B1Q9UNU6 501 aa9.91□□□□□ -0.82
UBE4B-204ENST00000462658 EVC2Q86UK5 1308 aa9.9□□□□□ -0.82
UBE4B-204ENST00000462658 MINDY4BA8MYZ0 360 aa9.9□□□□□ -0.82
UBE4B-204ENST00000462658 SCAMP3O14828 347 aaKnown RBP9.9□□□□□ -0.82
UBE4B-204ENST00000462658 GBP2P32456 591 aaPredicted RBP9.9□□□□□ -0.82
UBE4B-204ENST00000462658 PREPP48147 710 aa9.9□□□□□ -0.82
UBE4B-204ENST00000462658 SEPT6Q14141 434 aa9.9□□□□□ -0.82
UBE4B-204ENST00000462658 C9orf131Q5VYM1 1079 aa9.9□□□□□ -0.82
UBE4B-204ENST00000462658 ERMP1Q7Z2K6 904 aa9.9□□□□□ -0.82
UBE4B-204ENST00000462658 WAPLQ7Z5K2 1190 aa9.9□□□□□ -0.82
UBE4B-204ENST00000462658 SMG8Q8ND04 991 aaKnown RBP9.9□□□□□ -0.82
UBE4B-204ENST00000462658 ACSBG1Q96GR2 724 aa9.9□□□□□ -0.82
UBE4B-204ENST00000462658 PUS7Q96PZ0 661 aaKnown RBP9.9□□□□□ -0.82
UBE4B-204ENST00000462658 DLC1Q96QB1 1528 aa9.89□□□□□ -0.83
UBE4B-204ENST00000462658 PROCP04070 461 aa9.89□□□□□ -0.83
UBE4B-204ENST00000462658 HP1BP3Q5SSJ5 553 aaPredicted RBP9.89□□□□□ -0.83
UBE4B-204ENST00000462658 ANKRD34AQ69YU3 496 aa9.89□□□□□ -0.83
UBE4B-204ENST00000462658 HS2ST1Q7LGA3 356 aa9.89□□□□□ -0.83
UBE4B-204ENST00000462658 RELL1Q8IUW5 271 aa9.89□□□□□ -0.83
UBE4B-204ENST00000462658 DZIP1LQ8IYY4 767 aaKnown RBP9.89□□□□□ -0.83
UBE4B-204ENST00000462658 SPOCK3Q9BQ16 436 aa9.89□□□□□ -0.83
UBE4B-204ENST00000462658 RSRP1Q9BUV0 290 aa9.89□□□□□ -0.83
UBE4B-204ENST00000462658 SSBP4Q9BWG4 385 aaPredicted RBP9.89□□□□□ -0.83
UBE4B-204ENST00000462658 CEP41Q9BYV8 373 aa9.89□□□□□ -0.83
UBE4B-204ENST00000462658 PANK3Q9H999 370 aa9.89□□□□□ -0.83
UBE4B-204ENST00000462658 SUGCTQ9HAC7 445 aa9.89□□□□□ -0.83
UBE4B-204ENST00000462658 CACNA2D2Q9NY47 1150 aa9.89□□□□□ -0.83
UBE4B-204ENST00000462658 PPP1R9AQ9ULJ8 1098 aa9.89□□□□□ -0.83
UBE4B-204ENST00000462658 ARHGEF28Q8N1W1 1705 aaKnown RBP9.89□□□□□ -0.83
UBE4B-204ENST00000462658 PTPRUQ92729 1446 aa9.89□□□□□ -0.83
UBE4B-204ENST00000462658 QRICH2Q9H0J4 1663 aa9.88□□□□□ -0.83
UBE4B-204ENST00000462658 CCER2I3L3R5 266 aa9.88□□□□□ -0.83
UBE4B-204ENST00000462658 TRIM37O94972 964 aa9.88□□□□□ -0.83
UBE4B-204ENST00000462658 TIAF1O95411 115 aa9.88□□□□□ -0.83
UBE4B-204ENST00000462658 ADH5P11766 374 aa9.88□□□□□ -0.83
UBE4B-204ENST00000462658 RLBP1P12271 317 aa9.88□□□□□ -0.83
UBE4B-204ENST00000462658 LMNB1P20700 586 aa9.88□□□□□ -0.83
UBE4B-204ENST00000462658 RPS26P62854 115 aaKnown RBP9.88□□□□□ -0.83
UBE4B-204ENST00000462658 SOX4Q06945 474 aaPredicted RBP9.88□□□□□ -0.83
UBE4B-204ENST00000462658 KIF4BQ2VIQ3 1234 aa9.88□□□□□ -0.83
UBE4B-204ENST00000462658 RNF34Q969K3 372 aa9.88□□□□□ -0.83
UBE4B-204ENST00000462658 GAL3ST3Q96A11 431 aa9.88□□□□□ -0.83
UBE4B-204ENST00000462658 TMEM74Q96NL1 305 aa9.88□□□□□ -0.83
UBE4B-204ENST00000462658 AP4E1Q9UPM8 1137 aa9.88□□□□□ -0.83
UBE4B-204ENST00000462658 PLEKHH1Q9ULM0 1364 aa9.88□□□□□ -0.83
UBE4B-204ENST00000462658 E9PSI1 815 aa9.87□□□□□ -0.83
UBE4B-204ENST00000462658 SART1O43290 800 aaKnown RBP9.87□□□□□ -0.83
UBE4B-204ENST00000462658 PF4P02776 101 aa9.87□□□□□ -0.83
UBE4B-204ENST00000462658 HDLBPQ00341 1268 aaKnown RBP9.87□□□□□ -0.83
UBE4B-204ENST00000462658 FAM160A1Q05DH4 1040 aa9.87□□□□□ -0.83
UBE4B-204ENST00000462658 DOC2BQ14184 412 aa9.87□□□□□ -0.83
UBE4B-204ENST00000462658 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.87□□□□□ -0.83
UBE4B-204ENST00000462658 FAM46AQ96IP4 442 aaKnown RBP9.87□□□□□ -0.83
UBE4B-204ENST00000462658 PRKRIP1Q9H875 184 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms