RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 KRBA1A5PL33 1030 aa6.09□□□□□ -1.43
CSMD3-205ENST00000462254 CCER2I3L3R5 266 aa6.09□□□□□ -1.43
CSMD3-205ENST00000462254 PDE2AO00408 941 aaPredicted RBP6.09□□□□□ -1.43
CSMD3-205ENST00000462254 SMNDC1O75940 238 aaKnown RBP eCLIP6.09□□□□□ -1.43
CSMD3-205ENST00000462254 HSD3B2P26439 372 aa6.09□□□□□ -1.43
CSMD3-205ENST00000462254 PPP2R1AP30153 589 aa6.09□□□□□ -1.43
CSMD3-205ENST00000462254 CDC25BP30305 580 aa6.09□□□□□ -1.43
CSMD3-205ENST00000462254 MAPK8P45983 427 aa6.09□□□□□ -1.43
CSMD3-205ENST00000462254 ATP2B2Q01814 1243 aa6.09□□□□□ -1.43
CSMD3-205ENST00000462254 PWP2Q15269 919 aaKnown RBP6.09□□□□□ -1.43
CSMD3-205ENST00000462254 WFDC8Q8IUA0 241 aa6.09□□□□□ -1.43
CSMD3-205ENST00000462254 EPS8L3Q8TE67 593 aaKnown RBP6.09□□□□□ -1.43
CSMD3-205ENST00000462254 NXPE3Q969Y0 559 aa6.09□□□□□ -1.43
CSMD3-205ENST00000462254 CCDC74AQ96AQ1 378 aa6.09□□□□□ -1.43
CSMD3-205ENST00000462254 NPHS2Q9NP85 383 aa6.09□□□□□ -1.43
CSMD3-205ENST00000462254 SH2B1Q9NRF2 756 aaPredicted RBP6.09□□□□□ -1.43
CSMD3-205ENST00000462254 NOP58Q9Y2X3 529 aaKnown RBP6.09□□□□□ -1.43
CSMD3-205ENST00000462254 FAM208AQ9UK61 1670 aaKnown RBP6.09□□□□□ -1.43
CSMD3-205ENST00000462254 PLCH1Q4KWH8 1693 aa6.08□□□□□ -1.44
CSMD3-205ENST00000462254 LMO7Q8WWI1 1683 aa6.08□□□□□ -1.44
CSMD3-205ENST00000462254 CAMTA1Q9Y6Y1 1673 aa6.08□□□□□ -1.44
CSMD3-205ENST00000462254 NPHP3Q7Z494 1330 aa6.08□□□□□ -1.44
CSMD3-205ENST00000462254 PNMA6FA0A0J9YX94 578 aa6.08□□□□□ -1.44
CSMD3-205ENST00000462254 METTL12A8MUP2 240 aa6.08□□□□□ -1.44
CSMD3-205ENST00000462254 PIK3R2O00459 728 aa6.08□□□□□ -1.44
CSMD3-205ENST00000462254 DEAF1O75398 565 aaPredicted RBP6.08□□□□□ -1.44
CSMD3-205ENST00000462254 GDF11O95390 407 aa6.08□□□□□ -1.44
CSMD3-205ENST00000462254 NEFLP07196 543 aa6.08□□□□□ -1.44
CSMD3-205ENST00000462254 FBLN1P23142 703 aa6.08□□□□□ -1.44
CSMD3-205ENST00000462254 TNNT2P45379 298 aaPredicted RBP6.08□□□□□ -1.44
CSMD3-205ENST00000462254 ANAPC15P60006 121 aa6.08□□□□□ -1.44
CSMD3-205ENST00000462254 TXNDC11Q6PKC3 985 aa6.08□□□□□ -1.44
CSMD3-205ENST00000462254 PI16Q6UXB8 463 aa6.08□□□□□ -1.44
CSMD3-205ENST00000462254 KRT28Q7Z3Y7 464 aa6.08□□□□□ -1.44
CSMD3-205ENST00000462254 MORC1Q86VD1 984 aa6.08□□□□□ -1.44
CSMD3-205ENST00000462254 JAZF1Q86VZ6 243 aa6.08□□□□□ -1.44
CSMD3-205ENST00000462254 DNAJC25Q9H1X3 360 aa6.08□□□□□ -1.44
CSMD3-205ENST00000462254 NOP53Q9NZM5 478 aaKnown RBP6.08□□□□□ -1.44
CSMD3-205ENST00000462254 WWC3Q9ULE0 1092 aa6.08□□□□□ -1.44
CSMD3-205ENST00000462254 INPP5FQ9Y2H2 1132 aa6.08□□□□□ -1.44
CSMD3-205ENST00000462254 WNK3Q9BYP7 1800 aa6.08□□□□□ -1.44
CSMD3-205ENST00000462254 CDK12Q9NYV4 1490 aaPredicted RBP6.08□□□□□ -1.44
CSMD3-205ENST00000462254 SBNO1A3KN83 1393 aa6.07□□□□□ -1.44
CSMD3-205ENST00000462254 AATKQ6ZMQ8 1374 aa6.07□□□□□ -1.44
CSMD3-205ENST00000462254 EPHA1P21709 976 aa6.07□□□□□ -1.44
CSMD3-205ENST00000462254 TRIM28Q13263 835 aaKnown RBP6.07□□□□□ -1.44
CSMD3-205ENST00000462254 GRIK4Q16099 956 aa6.07□□□□□ -1.44
CSMD3-205ENST00000462254 ENOX2Q16206 610 aaKnown RBP6.07□□□□□ -1.44
CSMD3-205ENST00000462254 NFE2L2Q16236 605 aa6.07□□□□□ -1.44
CSMD3-205ENST00000462254 RNF187Q5TA31 235 aaPredicted RBP6.07□□□□□ -1.44
CSMD3-205ENST00000462254 NUTM2GQ5VZR2 741 aa6.07□□□□□ -1.44
CSMD3-205ENST00000462254 ZNF654Q8IZM8 581 aa6.07□□□□□ -1.44
CSMD3-205ENST00000462254 TMEM151AQ8N4L1 468 aa6.07□□□□□ -1.44
CSMD3-205ENST00000462254 TMEM102Q8N9M5 508 aaPredicted RBP6.07□□□□□ -1.44
CSMD3-205ENST00000462254 COG3Q96JB2 828 aa6.07□□□□□ -1.44
CSMD3-205ENST00000462254 MYH16Q9H6N6 1097 aa6.07□□□□□ -1.44
CSMD3-205ENST00000462254 RNF19AQ9NV58 838 aa6.07□□□□□ -1.44
CSMD3-205ENST00000462254 KLHL42Q9P2K6 505 aa6.07□□□□□ -1.44
CSMD3-205ENST00000462254 DDX41Q9UJV9 622 aaKnown RBP6.07□□□□□ -1.44
CSMD3-205ENST00000462254 USP19O94966 1318 aa6.06□□□□□ -1.44
CSMD3-205ENST00000462254 SPATA31A3Q5VYP0 1347 aa6.06□□□□□ -1.44
CSMD3-205ENST00000462254 NRAPQ86VF7 1730 aa6.06□□□□□ -1.44
CSMD3-205ENST00000462254 LINC01387J3KSC0 135 aa6.06□□□□□ -1.44
CSMD3-205ENST00000462254 STK10O94804 968 aaKnown RBP6.06□□□□□ -1.44
CSMD3-205ENST00000462254 ITGB2P05107 769 aa6.06□□□□□ -1.44
CSMD3-205ENST00000462254 CDC27P30260 824 aa6.06□□□□□ -1.44
CSMD3-205ENST00000462254 SETDB1Q15047 1291 aa6.06□□□□□ -1.44
CSMD3-205ENST00000462254 VPS37DQ86XT2 251 aa6.06□□□□□ -1.44
CSMD3-205ENST00000462254 FMR1NBQ8N0W7 255 aaPredicted RBP6.06□□□□□ -1.44
CSMD3-205ENST00000462254 ASAP3Q8TDY4 903 aa6.06□□□□□ -1.44
CSMD3-205ENST00000462254 TCF12Q99081 682 aa6.06□□□□□ -1.44
CSMD3-205ENST00000462254 ADAM19Q9H013 955 aa6.06□□□□□ -1.44
CSMD3-205ENST00000462254 SPDYE3A6NKU9 549 aa6.05□□□□□ -1.44
CSMD3-205ENST00000462254 TPD52L2O43399 206 aaKnown RBP6.05□□□□□ -1.44
CSMD3-205ENST00000462254 FGRP09769 529 aa6.05□□□□□ -1.44
CSMD3-205ENST00000462254 SPATA31C1P0DKV0 1188 aa6.05□□□□□ -1.44
CSMD3-205ENST00000462254 PTPRAP18433 802 aa6.05□□□□□ -1.44
CSMD3-205ENST00000462254 GRIA4P48058 902 aa6.05□□□□□ -1.44
CSMD3-205ENST00000462254 MTHFSP49914 203 aa6.05□□□□□ -1.44
CSMD3-205ENST00000462254 RRS1Q15050 365 aaKnown RBP6.05□□□□□ -1.44
CSMD3-205ENST00000462254 SPRED3Q2MJR0 410 aa6.05□□□□□ -1.44
CSMD3-205ENST00000462254 PRRT3Q5FWE3 981 aa6.05□□□□□ -1.44
CSMD3-205ENST00000462254 KIAA0319Q5VV43 1072 aa6.05□□□□□ -1.44
CSMD3-205ENST00000462254 ALG1LQ6GMV1 187 aa6.05□□□□□ -1.44
CSMD3-205ENST00000462254 SHISA2Q6UWI4 295 aa6.05□□□□□ -1.44
CSMD3-205ENST00000462254 MCF2L2Q86YR7 1114 aa6.05□□□□□ -1.44
CSMD3-205ENST00000462254 CCNJLQ8IV13 435 aa6.05□□□□□ -1.44
CSMD3-205ENST00000462254 CRELD1Q96HD1 420 aa6.05□□□□□ -1.44
CSMD3-205ENST00000462254 BHLHE41Q9C0J9 482 aaPredicted RBP6.05□□□□□ -1.44
CSMD3-205ENST00000462254 MUC3BQ9H195 1237 aa6.05□□□□□ -1.44
CSMD3-205ENST00000462254 LIN7BQ9HAP6 207 aa6.05□□□□□ -1.44
CSMD3-205ENST00000462254 POLKQ9UBT6 870 aa6.05□□□□□ -1.44
CSMD3-205ENST00000462254 SOX13Q9UN79 622 aa6.05□□□□□ -1.44
CSMD3-205ENST00000462254 COL14A1Q05707 1796 aaKnown RBP6.05□□□□□ -1.44
CSMD3-205ENST00000462254 NWD2Q9ULI1 1742 aa6.05□□□□□ -1.44
CSMD3-205ENST00000462254 ARHGEF10O15013 1369 aa6.05□□□□□ -1.44
CSMD3-205ENST00000462254 INSRP06213 1382 aa6.05□□□□□ -1.44
CSMD3-205ENST00000462254 PNPLA6Q8IY17 1366 aa6.05□□□□□ -1.44
CSMD3-205ENST00000462254 ABCC6O95255 1503 aa6.04□□□□□ -1.44
CSMD3-205ENST00000462254 TM4SF5O14894 197 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms