RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 HAND2P61296 217 aa13.82□□□□□ -0.2
TRAF3IP1-204ENST00000462122 PTH1RQ03431 593 aa13.82□□□□□ -0.2
TRAF3IP1-204ENST00000462122 ICA1Q05084 483 aa13.82□□□□□ -0.2
TRAF3IP1-204ENST00000462122 SH3D19Q5HYK7 790 aa13.82□□□□□ -0.2
TRAF3IP1-204ENST00000462122 AKNAD1Q5T1N1 836 aa13.82□□□□□ -0.2
TRAF3IP1-204ENST00000462122 MFSD6Q6ZSS7 791 aa13.82□□□□□ -0.2
TRAF3IP1-204ENST00000462122 PROCA1Q8NCQ7 364 aaPredicted RBP13.82□□□□□ -0.2
TRAF3IP1-204ENST00000462122 FEZ1Q99689 392 aa13.82□□□□□ -0.2
TRAF3IP1-204ENST00000462122 LSG1Q9H089 658 aaKnown RBP13.82□□□□□ -0.2
TRAF3IP1-204ENST00000462122 SH2D4AQ9H788 454 aa13.82□□□□□ -0.2
TRAF3IP1-204ENST00000462122 KANSL2Q9H9L4 492 aa13.82□□□□□ -0.2
TRAF3IP1-204ENST00000462122 ARHGEF10LQ9HCE6 1279 aa13.82□□□□□ -0.2
TRAF3IP1-204ENST00000462122 ANO2Q9NQ90 1003 aa13.82□□□□□ -0.2
TRAF3IP1-204ENST00000462122 MYH8P13535 1937 aa13.82□□□□□ -0.2
TRAF3IP1-204ENST00000462122 PHIPQ8WWQ0 1821 aa13.81□□□□□ -0.2
TRAF3IP1-204ENST00000462122 IGF2BP3O00425 579 aaKnown RBP eCLIP13.81□□□□□ -0.2
TRAF3IP1-204ENST00000462122 TSPY3P0CV98 308 aa13.81□□□□□ -0.2
TRAF3IP1-204ENST00000462122 TSPY8P0CW00 308 aa13.81□□□□□ -0.2
TRAF3IP1-204ENST00000462122 HSPA1AP0DMV8 641 aaKnown RBP13.81□□□□□ -0.2
TRAF3IP1-204ENST00000462122 HSPA1BP0DMV9 641 aaKnown RBP13.81□□□□□ -0.2
TRAF3IP1-204ENST00000462122 USP14P54578 494 aa13.81□□□□□ -0.2
TRAF3IP1-204ENST00000462122 MTMR2Q13614 643 aa13.81□□□□□ -0.2
TRAF3IP1-204ENST00000462122 PPP4R3BQ5MIZ7 849 aa13.81□□□□□ -0.2
TRAF3IP1-204ENST00000462122 ANKRD23Q86SG2 305 aa13.81□□□□□ -0.2
TRAF3IP1-204ENST00000462122 PTPN18Q99952 460 aa13.81□□□□□ -0.2
TRAF3IP1-204ENST00000462122 KIAA1683Q9H0B3 1180 aa13.81□□□□□ -0.2
TRAF3IP1-204ENST00000462122 TOMM22Q9NS69 142 aa13.81□□□□□ -0.2
TRAF3IP1-204ENST00000462122 RNF186Q9NXI6 227 aa13.81□□□□□ -0.2
TRAF3IP1-204ENST00000462122 TMOD4Q9NZQ9 345 aa13.81□□□□□ -0.2
TRAF3IP1-204ENST00000462122 GTF3C3Q9Y5Q9 886 aa13.81□□□□□ -0.2
TRAF3IP1-204ENST00000462122 LAMA4Q16363 1823 aa13.8□□□□□ -0.2
TRAF3IP1-204ENST00000462122 TSPY2A6NKD2 308 aa13.8□□□□□ -0.2
TRAF3IP1-204ENST00000462122 BTBD19C9JJ37 291 aa13.8□□□□□ -0.2
TRAF3IP1-204ENST00000462122 HMGCS2P54868 508 aa13.8□□□□□ -0.2
TRAF3IP1-204ENST00000462122 MOGSQ13724 837 aa13.8□□□□□ -0.2
TRAF3IP1-204ENST00000462122 USP17L2Q6R6M4 530 aa13.8□□□□□ -0.2
TRAF3IP1-204ENST00000462122 GADL1Q6ZQY3 521 aa13.8□□□□□ -0.2
TRAF3IP1-204ENST00000462122 TBC1D10CQ8IV04 446 aa13.8□□□□□ -0.2
TRAF3IP1-204ENST00000462122 NEDD1Q8NHV4 660 aa13.8□□□□□ -0.2
TRAF3IP1-204ENST00000462122 ESR2Q92731 530 aa13.8□□□□□ -0.2
TRAF3IP1-204ENST00000462122 C12orf42Q96LP6 360 aa13.8□□□□□ -0.2
TRAF3IP1-204ENST00000462122 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.8□□□□□ -0.2
TRAF3IP1-204ENST00000462122 CFHR5Q9BXR6 569 aa13.8□□□□□ -0.2
TRAF3IP1-204ENST00000462122 NBPF3Q9H094 633 aa13.8□□□□□ -0.2
TRAF3IP1-204ENST00000462122 CNNM2Q9H8M5 875 aa13.8□□□□□ -0.2
TRAF3IP1-204ENST00000462122 AGTPBP1Q9UPW5 1226 aa13.8□□□□□ -0.2
TRAF3IP1-204ENST00000462122 SLC45A1Q9Y2W3 748 aa13.8□□□□□ -0.2
TRAF3IP1-204ENST00000462122 RBM8AQ9Y5S9 174 aaKnown RBP13.8□□□□□ -0.2
TRAF3IP1-204ENST00000462122 IGKV6D-41A0A0C4DH26 115 aa13.79□□□□□ -0.2
TRAF3IP1-204ENST00000462122 RANBP6O60518 1105 aaKnown RBP13.79□□□□□ -0.2
TRAF3IP1-204ENST00000462122 TRPA1O75762 1119 aa13.79□□□□□ -0.2
TRAF3IP1-204ENST00000462122 REC8O95072 547 aa13.79□□□□□ -0.2
TRAF3IP1-204ENST00000462122 TFAP4Q01664 338 aa13.79□□□□□ -0.2
TRAF3IP1-204ENST00000462122 PABPC4Q13310 644 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRAF3IP1-204ENST00000462122 FAM47AQ5JRC9 791 aa13.79□□□□□ -0.2
TRAF3IP1-204ENST00000462122 RRP12Q5JTH9 1297 aaKnown RBP13.79□□□□□ -0.2
TRAF3IP1-204ENST00000462122 FAM43AQ8N2R8 423 aa13.79□□□□□ -0.2
TRAF3IP1-204ENST00000462122 ACER1Q8TDN7 264 aa13.79□□□□□ -0.2
TRAF3IP1-204ENST00000462122 NYAP2Q9P242 653 aa13.79□□□□□ -0.2
TRAF3IP1-204ENST00000462122 SYNPO2Q9UMS6 1093 aa13.79□□□□□ -0.2
TRAF3IP1-204ENST00000462122 TMX2Q9Y320 296 aa13.79□□□□□ -0.2
TRAF3IP1-204ENST00000462122 TACC3Q9Y6A5 838 aa13.79□□□□□ -0.2
TRAF3IP1-204ENST00000462122 GREB1LQ9C091 1923 aaPredicted RBP13.79□□□□□ -0.2
TRAF3IP1-204ENST00000462122 EIF5BO60841 1220 aaKnown RBP13.78□□□□□ -0.2
TRAF3IP1-204ENST00000462122 TTLL1O95922 423 aa13.78□□□□□ -0.2
TRAF3IP1-204ENST00000462122 CYP21A2P08686 494 aa13.78□□□□□ -0.2
TRAF3IP1-204ENST00000462122 EEF2P13639 858 aaKnown RBP13.78□□□□□ -0.2
TRAF3IP1-204ENST00000462122 TAF1CQ15572 869 aaPredicted RBP13.78□□□□□ -0.2
TRAF3IP1-204ENST00000462122 GPAT2Q6NUI2 795 aa13.78□□□□□ -0.2
TRAF3IP1-204ENST00000462122 CEP95Q96GE4 821 aa13.78□□□□□ -0.2
TRAF3IP1-204ENST00000462122 KRT23Q9C075 422 aa13.78□□□□□ -0.2
TRAF3IP1-204ENST00000462122 INCENPQ9NQS7 918 aa13.78□□□□□ -0.2
TRAF3IP1-204ENST00000462122 MTMR4Q9NYA4 1195 aa13.78□□□□□ -0.2
TRAF3IP1-204ENST00000462122 PNMA3Q9UL41 463 aa13.78□□□□□ -0.2
TRAF3IP1-204ENST00000462122 NEDD4P46934 1319 aa13.78□□□□□ -0.2
TRAF3IP1-204ENST00000462122 LOC285556D6RIA3 1793 aa13.78□□□□□ -0.2
TRAF3IP1-204ENST00000462122 A0A1W2PRG0 241 aa13.77□□□□□ -0.21
TRAF3IP1-204ENST00000462122 PDHXO00330 501 aa13.77□□□□□ -0.21
TRAF3IP1-204ENST00000462122 EPB41L2O43491 1005 aaKnown RBP13.77□□□□□ -0.21
TRAF3IP1-204ENST00000462122 PTPRFP10586 1907 aa13.77□□□□□ -0.21
TRAF3IP1-204ENST00000462122 CTCFP49711 727 aaPredicted RBP13.77□□□□□ -0.21
TRAF3IP1-204ENST00000462122 ATP2B2Q01814 1243 aa13.77□□□□□ -0.21
TRAF3IP1-204ENST00000462122 TRDNQ13061 729 aa13.77□□□□□ -0.21
TRAF3IP1-204ENST00000462122 RNF20Q5VTR2 975 aa13.77□□□□□ -0.21
TRAF3IP1-204ENST00000462122 CLEC10AQ8IUN9 316 aa13.77□□□□□ -0.21
TRAF3IP1-204ENST00000462122 SIAH1Q8IUQ4 282 aa13.77□□□□□ -0.21
TRAF3IP1-204ENST00000462122 LPAR1Q92633 364 aa13.77□□□□□ -0.21
TRAF3IP1-204ENST00000462122 MKL1Q969V6 931 aa13.77□□□□□ -0.21
TRAF3IP1-204ENST00000462122 PARK7Q99497 189 aaKnown RBP13.77□□□□□ -0.21
TRAF3IP1-204ENST00000462122 VCPKMTQ9H867 229 aa13.77□□□□□ -0.21
TRAF3IP1-204ENST00000462122 ZFYVE28Q9HCC9 887 aa13.77□□□□□ -0.21
TRAF3IP1-204ENST00000462122 GOPCQ9HD26 462 aa13.77□□□□□ -0.21
TRAF3IP1-204ENST00000462122 EMILIN3Q9NT22 766 aa13.77□□□□□ -0.21
TRAF3IP1-204ENST00000462122 TCP11L1Q9NUJ3 509 aa13.77□□□□□ -0.21
TRAF3IP1-204ENST00000462122 FOXN1O15353 648 aa13.76□□□□□ -0.21
TRAF3IP1-204ENST00000462122 VCAM1P19320 739 aa13.76□□□□□ -0.21
TRAF3IP1-204ENST00000462122 HOXA7P31268 230 aaPredicted RBP13.76□□□□□ -0.21
TRAF3IP1-204ENST00000462122 NECTIN1Q15223 517 aa13.76□□□□□ -0.21
TRAF3IP1-204ENST00000462122 ZYXQ15942 572 aaKnown RBP13.76□□□□□ -0.21
TRAF3IP1-204ENST00000462122 CCDC178Q5BJE1 867 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms