RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-222ENST00000461849 USP14P54578 494 aa16.6■□□□□ 0.25
RBM39-222ENST00000461849 UBE3CQ15386 1083 aa16.6■□□□□ 0.25
RBM39-222ENST00000461849 PI4K2BQ8TCG2 481 aa16.6■□□□□ 0.25
RBM39-222ENST00000461849 ATP8A2Q9NTI2 1148 aa16.6■□□□□ 0.25
RBM39-222ENST00000461849 GABRQQ9UN88 632 aa16.6■□□□□ 0.25
RBM39-222ENST00000461849 SHMT1P34896 483 aa16.59■□□□□ 0.25
RBM39-222ENST00000461849 ZYXQ15942 572 aaKnown RBP16.59■□□□□ 0.25
RBM39-222ENST00000461849 PRPF38BQ5VTL8 546 aaKnown RBP16.59■□□□□ 0.25
RBM39-222ENST00000461849 CCAR1Q8IX12 1150 aaKnown RBP16.59■□□□□ 0.25
RBM39-222ENST00000461849 NKX2-3Q8TAU0 364 aa16.59■□□□□ 0.25
RBM39-222ENST00000461849 ADCY3O60266 1144 aa16.58■□□□□ 0.24
RBM39-222ENST00000461849 HERVK_113P62684 666 aa16.58■□□□□ 0.24
RBM39-222ENST00000461849 MTFR1Q15390 333 aa16.58■□□□□ 0.24
RBM39-222ENST00000461849 PXYLP1Q8TE99 480 aa16.58■□□□□ 0.24
RBM39-222ENST00000461849 GTF3C2Q8WUA4 911 aaPredicted RBP16.58■□□□□ 0.24
RBM39-222ENST00000461849 P2RX7Q99572 595 aaKnown RBP16.58■□□□□ 0.24
RBM39-222ENST00000461849 RNF208Q9H0X6 261 aa16.58■□□□□ 0.24
RBM39-222ENST00000461849 EMILIN3Q9NT22 766 aa16.58■□□□□ 0.24
RBM39-222ENST00000461849 SWAP70Q9UH65 585 aa16.58■□□□□ 0.24
RBM39-222ENST00000461849 KIAA0100Q14667 2235 aaKnown RBP16.58■□□□□ 0.24
RBM39-222ENST00000461849 PDE4DIPQ5VU43 2346 aa16.57■□□□□ 0.24
RBM39-222ENST00000461849 PRKAB2O43741 272 aa16.57■□□□□ 0.24
RBM39-222ENST00000461849 GABPAQ06546 454 aa16.57■□□□□ 0.24
RBM39-222ENST00000461849 IRF5Q13568 498 aa16.57■□□□□ 0.24
RBM39-222ENST00000461849 SLFNL1Q499Z3 407 aa16.57■□□□□ 0.24
RBM39-222ENST00000461849 GPRC5AQ8NFJ5 357 aa16.57■□□□□ 0.24
RBM39-222ENST00000461849 SLC4A4Q9Y6R1 1079 aa16.57■□□□□ 0.24
RBM39-222ENST00000461849 USP17L15C9J2P7 530 aa16.56■□□□□ 0.24
RBM39-222ENST00000461849 USP17L13C9JLJ4 530 aa16.56■□□□□ 0.24
RBM39-222ENST00000461849 USP17L11C9JVI0 530 aa16.56■□□□□ 0.24
RBM39-222ENST00000461849 USP17L18D6R9N7 530 aa16.56■□□□□ 0.24
RBM39-222ENST00000461849 USP17L22D6RA61 530 aa16.56■□□□□ 0.24
RBM39-222ENST00000461849 USP17L17D6RBQ6 530 aa16.56■□□□□ 0.24
RBM39-222ENST00000461849 USP17L19D6RCP7 530 aa16.56■□□□□ 0.24
RBM39-222ENST00000461849 USP17L20D6RJB6 530 aa16.56■□□□□ 0.24
RBM39-222ENST00000461849 CCL5P13501 91 aa16.56■□□□□ 0.24
RBM39-222ENST00000461849 USP17L24Q0WX57 530 aa16.56■□□□□ 0.24
RBM39-222ENST00000461849 LRRFIP1Q32MZ4 808 aaKnown RBP16.56■□□□□ 0.24
RBM39-222ENST00000461849 TSHZ3Q63HK5 1081 aa16.56■□□□□ 0.24
RBM39-222ENST00000461849 C12orf42Q96LP6 360 aa16.56■□□□□ 0.24
RBM39-222ENST00000461849 KIAA1683Q9H0B3 1180 aa16.56■□□□□ 0.24
RBM39-222ENST00000461849 CWC22Q9HCG8 908 aaKnown RBP16.56■□□□□ 0.24
RBM39-222ENST00000461849 MORF4L1Q9UBU8 362 aa16.56■□□□□ 0.24
RBM39-222ENST00000461849 DDX60LQ5H9U9 1706 aaKnown RBP16.56■□□□□ 0.24
RBM39-222ENST00000461849 MYH7P12883 1935 aa16.55■□□□□ 0.24
RBM39-222ENST00000461849 CYP2D6P10635 497 aa16.55■□□□□ 0.24
RBM39-222ENST00000461849 ELNP15502 786 aa16.55■□□□□ 0.24
RBM39-222ENST00000461849 SEPT2Q15019 361 aa16.55■□□□□ 0.24
RBM39-222ENST00000461849 KBTBD3Q8NAB2 608 aa16.55■□□□□ 0.24
RBM39-222ENST00000461849 PAGR1Q9BTK6 254 aa16.55■□□□□ 0.24
RBM39-222ENST00000461849 PUS7LQ9H0K6 701 aaKnown RBP16.55■□□□□ 0.24
RBM39-222ENST00000461849 CHGBP05060 677 aa16.54■□□□□ 0.24
RBM39-222ENST00000461849 INHAP05111 366 aa16.54■□□□□ 0.24
RBM39-222ENST00000461849 GJB1P08034 283 aa16.54■□□□□ 0.24
RBM39-222ENST00000461849 TTC22Q5TAA0 569 aa16.54■□□□□ 0.24
RBM39-222ENST00000461849 TMEM179Q6ZVK1 233 aa16.54■□□□□ 0.24
RBM39-222ENST00000461849 TICAM2Q86XR7 235 aa16.54■□□□□ 0.24
RBM39-222ENST00000461849 ACER1Q8TDN7 264 aa16.54■□□□□ 0.24
RBM39-222ENST00000461849 DYNLL2Q96FJ2 89 aa16.54■□□□□ 0.24
RBM39-222ENST00000461849 USP17L12C9JPN9 530 aa16.53■□□□□ 0.24
RBM39-222ENST00000461849 USP17L21D6R901 530 aa16.53■□□□□ 0.24
RBM39-222ENST00000461849 ZFYP08048 801 aaPredicted RBP16.53■□□□□ 0.24
RBM39-222ENST00000461849 VCAM1P19320 739 aa16.53■□□□□ 0.24
RBM39-222ENST00000461849 MAPK4P31152 587 aa16.53■□□□□ 0.24
RBM39-222ENST00000461849 GUCY1A2P33402 732 aa16.53■□□□□ 0.24
RBM39-222ENST00000461849 GJA8P48165 433 aa16.53■□□□□ 0.24
RBM39-222ENST00000461849 ERVK-9P63128 1117 aa16.53■□□□□ 0.24
RBM39-222ENST00000461849 ERVK-24P63145 666 aa16.53■□□□□ 0.24
RBM39-222ENST00000461849 EVX2Q03828 476 aa16.53■□□□□ 0.24
RBM39-222ENST00000461849 C12orf60Q5U649 245 aa16.53■□□□□ 0.24
RBM39-222ENST00000461849 CATSPERGQ6ZRH7 1159 aa16.53■□□□□ 0.24
RBM39-222ENST00000461849 SLC44A5Q8NCS7 719 aa16.53■□□□□ 0.24
RBM39-222ENST00000461849 NUDT12Q9BQG2 462 aa16.53■□□□□ 0.24
RBM39-222ENST00000461849 TXNRD2Q9NNW7 524 aa16.53■□□□□ 0.24
RBM39-222ENST00000461849 RBPJLQ9UBG7 517 aa16.53■□□□□ 0.24
RBM39-222ENST00000461849 RNF113AO15541 343 aaKnown RBP16.52■□□□□ 0.24
RBM39-222ENST00000461849 CCNA1P78396 465 aa16.52■□□□□ 0.24
RBM39-222ENST00000461849 BMP2KLQ5H9B9 411 aa16.52■□□□□ 0.24
RBM39-222ENST00000461849 SOCS4Q8WXH5 440 aa16.52■□□□□ 0.24
RBM39-222ENST00000461849 APPBP2Q92624 585 aa16.52■□□□□ 0.24
RBM39-222ENST00000461849 CCDC17Q96LX7 622 aa16.52■□□□□ 0.24
RBM39-222ENST00000461849 UNC93B1Q9H1C4 597 aa16.52■□□□□ 0.24
RBM39-222ENST00000461849 RPAP3Q9H6T3 665 aaPredicted RBP16.52■□□□□ 0.24
RBM39-222ENST00000461849 SH2D4AQ9H788 454 aa16.52■□□□□ 0.24
RBM39-222ENST00000461849 ARHGEF10LQ9HCE6 1279 aa16.52■□□□□ 0.24
RBM39-222ENST00000461849 ARPP21Q9UBL0 812 aaPredicted RBP16.52■□□□□ 0.24
RBM39-222ENST00000461849 RABGAP1Q9Y3P9 1069 aa16.52■□□□□ 0.24
RBM39-222ENST00000461849 MYH8P13535 1937 aa16.51■□□□□ 0.23
RBM39-222ENST00000461849 BAZ2AQ9UIF9 1905 aaKnown RBP16.51■□□□□ 0.23
RBM39-222ENST00000461849 CYP2D7A0A087X1C5 515 aa16.51■□□□□ 0.23
RBM39-222ENST00000461849 PEX10O60683 326 aa16.51■□□□□ 0.23
RBM39-222ENST00000461849 HMGCRP04035 888 aa16.51■□□□□ 0.23
RBM39-222ENST00000461849 CYP2B6P20813 491 aa16.51■□□□□ 0.23
RBM39-222ENST00000461849 CDK8P49336 464 aa16.51■□□□□ 0.23
RBM39-222ENST00000461849 ICA1Q05084 483 aa16.51■□□□□ 0.23
RBM39-222ENST00000461849 Q3C1V9 767 aa16.51■□□□□ 0.23
RBM39-222ENST00000461849 CTR9Q6PD62 1173 aa16.51■□□□□ 0.23
RBM39-222ENST00000461849 SKAP1Q86WV1 359 aa16.51■□□□□ 0.23
RBM39-222ENST00000461849 U2AF1L4Q8WU68 220 aaKnown RBP16.51■□□□□ 0.23
RBM39-222ENST00000461849 EVI5LQ96CN4 794 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms