RNA–Protein interactions for RNA: ENST00000461603.5

LMBR1-215, Transcript of limb development membrane protein 1, humanhuman

TSL 4

Gene LMBR1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-215ENST00000461603 TRIM33Q9UPN9 1127 aa7.71□□□□□ -1.18
LMBR1-215ENST00000461603 RGPD2P0DJD1 1756 aa7.71□□□□□ -1.18
LMBR1-215ENST00000461603 KIAA1551Q9HCM1 1747 aa7.7□□□□□ -1.18
LMBR1-215ENST00000461603 A0A0G2JLW4 131 aa7.7□□□□□ -1.18
LMBR1-215ENST00000461603 DLL1O00548 723 aa7.7□□□□□ -1.18
LMBR1-215ENST00000461603 PROCP04070 461 aa7.7□□□□□ -1.18
LMBR1-215ENST00000461603 ADGRE1Q14246 886 aa7.7□□□□□ -1.18
LMBR1-215ENST00000461603 C9orf131Q5VYM1 1079 aa7.7□□□□□ -1.18
LMBR1-215ENST00000461603 GPAT2Q6NUI2 795 aa7.7□□□□□ -1.18
LMBR1-215ENST00000461603 ZSCAN29Q8IWY8 852 aaPredicted RBP7.7□□□□□ -1.18
LMBR1-215ENST00000461603 TMEM130Q8N3G9 435 aa7.7□□□□□ -1.18
LMBR1-215ENST00000461603 IP6K1Q92551 441 aa7.7□□□□□ -1.18
LMBR1-215ENST00000461603 NXPE3Q969Y0 559 aa7.7□□□□□ -1.18
LMBR1-215ENST00000461603 POP1Q99575 1024 aaKnown RBP7.7□□□□□ -1.18
LMBR1-215ENST00000461603 OSMRQ99650 979 aa7.7□□□□□ -1.18
LMBR1-215ENST00000461603 OSGEPQ9NPF4 335 aa7.7□□□□□ -1.18
LMBR1-215ENST00000461603 SBNO2Q9Y2G9 1366 aa7.7□□□□□ -1.18
LMBR1-215ENST00000461603 PKD1L3Q7Z443 1732 aa7.69□□□□□ -1.18
LMBR1-215ENST00000461603 MMP10P09238 476 aa7.69□□□□□ -1.18
LMBR1-215ENST00000461603 CHRNA4P43681 627 aa7.69□□□□□ -1.18
LMBR1-215ENST00000461603 KIAA0319Q5VV43 1072 aa7.69□□□□□ -1.18
LMBR1-215ENST00000461603 MPRIPQ6WCQ1 1025 aa7.69□□□□□ -1.18
LMBR1-215ENST00000461603 BSNDQ8WZ55 320 aa7.69□□□□□ -1.18
LMBR1-215ENST00000461603 PLEKHG2Q9H7P9 1386 aa7.69□□□□□ -1.18
LMBR1-215ENST00000461603 NSD3Q9BZ95 1437 aa7.69□□□□□ -1.18
LMBR1-215ENST00000461603 KIF13BQ9NQT8 1826 aa7.68□□□□□ -1.18
LMBR1-215ENST00000461603 H3BRJ5 948 aa7.68□□□□□ -1.18
LMBR1-215ENST00000461603 DEAF1O75398 565 aaPredicted RBP7.68□□□□□ -1.18
LMBR1-215ENST00000461603 SELPP16109 830 aa7.68□□□□□ -1.18
LMBR1-215ENST00000461603 GATA4P43694 442 aa7.68□□□□□ -1.18
LMBR1-215ENST00000461603 SETDB1Q15047 1291 aa7.68□□□□□ -1.18
LMBR1-215ENST00000461603 PEAR1Q5VY43 1037 aaPredicted RBP7.68□□□□□ -1.18
LMBR1-215ENST00000461603 USHBP1Q8N6Y0 703 aa7.68□□□□□ -1.18
LMBR1-215ENST00000461603 SMC1BQ8NDV3 1235 aa7.68□□□□□ -1.18
LMBR1-215ENST00000461603 TMC1Q8TDI8 760 aa7.68□□□□□ -1.18
LMBR1-215ENST00000461603 ZKSCAN3Q9BRR0 538 aa7.68□□□□□ -1.18
LMBR1-215ENST00000461603 MRPL18Q9H0U6 180 aaKnown RBP7.68□□□□□ -1.18
LMBR1-215ENST00000461603 SOX17Q9H6I2 414 aaPredicted RBP7.68□□□□□ -1.18
LMBR1-215ENST00000461603 SOX13Q9UN79 622 aa7.68□□□□□ -1.18
LMBR1-215ENST00000461603 KDM2BQ8NHM5 1336 aa7.68□□□□□ -1.18
LMBR1-215ENST00000461603 CD163L1Q9NR16 1453 aa7.68□□□□□ -1.18
LMBR1-215ENST00000461603 TNRC6CQ9HCJ0 1690 aaKnown RBP7.67□□□□□ -1.18
LMBR1-215ENST00000461603 GPR182O15218 404 aa7.67□□□□□ -1.18
LMBR1-215ENST00000461603 TREHO43280 583 aa7.67□□□□□ -1.18
LMBR1-215ENST00000461603 DPEP1P16444 411 aa7.67□□□□□ -1.18
LMBR1-215ENST00000461603 HMGB2P26583 209 aaKnown RBP7.67□□□□□ -1.18
LMBR1-215ENST00000461603 TGFB2P61812 414 aa7.67□□□□□ -1.18
LMBR1-215ENST00000461603 PTPN12Q05209 780 aaKnown RBP7.67□□□□□ -1.18
LMBR1-215ENST00000461603 GRIK4Q16099 956 aa7.67□□□□□ -1.18
LMBR1-215ENST00000461603 TMC7Q7Z402 723 aa7.67□□□□□ -1.18
LMBR1-215ENST00000461603 LINC00116Q8NCU8 138 aa7.67□□□□□ -1.18
LMBR1-215ENST00000461603 ASB16Q96NS5 453 aa7.67□□□□□ -1.18
LMBR1-215ENST00000461603 ZFYVE1Q9HBF4 777 aa7.67□□□□□ -1.18
LMBR1-215ENST00000461603 RNF181Q9P0P0 153 aa7.67□□□□□ -1.18
LMBR1-215ENST00000461603 C10orf71Q711Q0 1435 aa7.67□□□□□ -1.18
LMBR1-215ENST00000461603 BRCA1P38398 1863 aaKnown RBP7.66□□□□□ -1.18
LMBR1-215ENST00000461603 FAM229AH3BQW9 127 aa7.66□□□□□ -1.18
LMBR1-215ENST00000461603 FBLN1P23142 703 aa7.66□□□□□ -1.18
LMBR1-215ENST00000461603 MAPK1P28482 360 aa7.66□□□□□ -1.18
LMBR1-215ENST00000461603 HOXC9P31274 260 aa7.66□□□□□ -1.18
LMBR1-215ENST00000461603 DSC3Q14574 896 aa7.66□□□□□ -1.18
LMBR1-215ENST00000461603 COL19A1Q14993 1142 aa7.66□□□□□ -1.18
LMBR1-215ENST00000461603 TXNRD3Q86VQ6 643 aa7.66□□□□□ -1.18
LMBR1-215ENST00000461603 CCNJLQ8IV13 435 aa7.66□□□□□ -1.18
LMBR1-215ENST00000461603 CSRNP1Q96S65 589 aa7.66□□□□□ -1.18
LMBR1-215ENST00000461603 MAP3K19Q56UN5 1328 aa7.66□□□□□ -1.18
LMBR1-215ENST00000461603 ITGB4P16144 1822 aa7.66□□□□□ -1.18
LMBR1-215ENST00000461603 EIF1AYO14602 144 aaKnown RBP7.65□□□□□ -1.18
LMBR1-215ENST00000461603 FSCN2O14926 492 aa7.65□□□□□ -1.18
LMBR1-215ENST00000461603 AMPHP49418 695 aa7.65□□□□□ -1.18
LMBR1-215ENST00000461603 ARL4DP49703 201 aa7.65□□□□□ -1.18
LMBR1-215ENST00000461603 FGD1P98174 961 aa7.65□□□□□ -1.18
LMBR1-215ENST00000461603 PLCB3Q01970 1234 aa7.65□□□□□ -1.18
LMBR1-215ENST00000461603 MBTPS1Q14703 1052 aa7.65□□□□□ -1.18
LMBR1-215ENST00000461603 NBPF6Q5VWK0 638 aa7.65□□□□□ -1.18
LMBR1-215ENST00000461603 EDC4Q6P2E9 1401 aaKnown RBP7.65□□□□□ -1.18
LMBR1-215ENST00000461603 HDGFL2Q7Z4V5 671 aaPredicted RBP7.65□□□□□ -1.18
LMBR1-215ENST00000461603 FBF1Q8TES7 1133 aa7.65□□□□□ -1.18
LMBR1-215ENST00000461603 RAPGEF4Q8WZA2 1011 aa7.65□□□□□ -1.18
LMBR1-215ENST00000461603 SMARCC1Q92922 1105 aaPredicted RBP7.65□□□□□ -1.18
LMBR1-215ENST00000461603 NBPF4Q96M43 638 aa7.65□□□□□ -1.18
LMBR1-215ENST00000461603 PCDH11XQ9BZA7 1347 aa7.65□□□□□ -1.18
LMBR1-215ENST00000461603 PCDH11YQ9BZA8 1340 aa7.65□□□□□ -1.18
LMBR1-215ENST00000461603 NIF3L1Q9GZT8 377 aa7.65□□□□□ -1.18
LMBR1-215ENST00000461603 LACRTQ9GZZ8 138 aa7.65□□□□□ -1.18
LMBR1-215ENST00000461603 SEC31BQ9NQW1 1179 aa7.65□□□□□ -1.18
LMBR1-215ENST00000461603 ARFGEF1Q9Y6D6 1849 aa7.65□□□□□ -1.18
LMBR1-215ENST00000461603 MAP2P11137 1827 aaKnown RBP7.64□□□□□ -1.19
LMBR1-215ENST00000461603 CGNL1Q0VF96 1302 aa7.64□□□□□ -1.19
LMBR1-215ENST00000461603 A0A1W2PP55 124 aa7.64□□□□□ -1.19
LMBR1-215ENST00000461603 EPHA1P21709 976 aa7.64□□□□□ -1.19
LMBR1-215ENST00000461603 CD68P34810 354 aaPredicted RBP7.64□□□□□ -1.19
LMBR1-215ENST00000461603 SUZ12Q15022 739 aaKnown RBP7.64□□□□□ -1.19
LMBR1-215ENST00000461603 PRPF40BQ6NWY9 871 aaKnown RBP7.64□□□□□ -1.19
LMBR1-215ENST00000461603 SND1Q7KZF4 910 aaKnown RBP eCLIP7.64□□□□□ -1.19
LMBR1-215ENST00000461603 PIGBQ92521 554 aa7.64□□□□□ -1.19
LMBR1-215ENST00000461603 CCDC74AQ96AQ1 378 aa7.64□□□□□ -1.19
LMBR1-215ENST00000461603 SLC12A5Q9H2X9 1139 aa7.64□□□□□ -1.19
LMBR1-215ENST00000461603 C4AP0C0L4 1744 aa7.64□□□□□ -1.19
LMBR1-215ENST00000461603 A0A1W2PP64 1363 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms