RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 USP17L22D6RA61 530 aa16.87■□□□□ 0.29
PABPC4-208ENST00000461578 USP17L17D6RBQ6 530 aa16.87■□□□□ 0.29
PABPC4-208ENST00000461578 USP17L19D6RCP7 530 aa16.87■□□□□ 0.29
PABPC4-208ENST00000461578 USP17L20D6RJB6 530 aa16.87■□□□□ 0.29
PABPC4-208ENST00000461578 PTPREP23469 700 aa16.87■□□□□ 0.29
PABPC4-208ENST00000461578 PPP4CP60510 307 aa16.87■□□□□ 0.29
PABPC4-208ENST00000461578 DYNLL1P63167 89 aaKnown RBP16.87■□□□□ 0.29
PABPC4-208ENST00000461578 USP17L24Q0WX57 530 aa16.87■□□□□ 0.29
PABPC4-208ENST00000461578 G3BP1Q13283 466 aaKnown RBP eCLIP16.87■□□□□ 0.294e-7■□□□□ 10.4
PABPC4-208ENST00000461578 SHHQ15465 462 aa16.87■□□□□ 0.29
PABPC4-208ENST00000461578 TTC39AQ5SRH9 613 aa16.87■□□□□ 0.29
PABPC4-208ENST00000461578 GJC2Q5T442 439 aaPredicted RBP16.87■□□□□ 0.29
PABPC4-208ENST00000461578 LPAR1Q92633 364 aa16.87■□□□□ 0.29
PABPC4-208ENST00000461578 PRDM5Q9NQX1 630 aaPredicted RBP16.87■□□□□ 0.29
PABPC4-208ENST00000461578 IVNS1ABPQ9Y6Y0 642 aa16.87■□□□□ 0.29
PABPC4-208ENST00000461578 EYSQ5T1H1 3165 aa16.87■□□□□ 0.29
PABPC4-208ENST00000461578 DNM1LO00429 736 aa16.86■□□□□ 0.29
PABPC4-208ENST00000461578 MSCO60682 206 aa16.86■□□□□ 0.29
PABPC4-208ENST00000461578 MYCNP04198 464 aaPredicted RBP16.86■□□□□ 0.29
PABPC4-208ENST00000461578 RAB3GAP1Q15042 981 aa16.86■□□□□ 0.29
PABPC4-208ENST00000461578 C9orf50Q5SZB4 431 aa16.86■□□□□ 0.29
PABPC4-208ENST00000461578 ANO1Q5XXA6 986 aa16.86■□□□□ 0.29
PABPC4-208ENST00000461578 TRPV1Q8NER1 839 aa16.86■□□□□ 0.29
PABPC4-208ENST00000461578 MAFAQ8NHW3 353 aaPredicted RBP16.86■□□□□ 0.29
PABPC4-208ENST00000461578 BTBD7Q9P203 1132 aa16.86■□□□□ 0.29
PABPC4-208ENST00000461578 PNMA6EA0A0J9YXQ4 647 aa16.85■□□□□ 0.29
PABPC4-208ENST00000461578 CYP2E1P05181 493 aaPredicted RBP16.85■□□□□ 0.29
PABPC4-208ENST00000461578 ATF7IPQ6VMQ6 1270 aa16.85■□□□□ 0.29
PABPC4-208ENST00000461578 CATSPERGQ6ZRH7 1159 aa16.85■□□□□ 0.29
PABPC4-208ENST00000461578 MYLIPQ8WY64 445 aa16.85■□□□□ 0.29
PABPC4-208ENST00000461578 C12orf42Q96LP6 360 aa16.85■□□□□ 0.29
PABPC4-208ENST00000461578 DBNDD2Q9BQY9 259 aa16.85■□□□□ 0.29
PABPC4-208ENST00000461578 SEMA6BQ9H3T3 888 aa16.85■□□□□ 0.29
PABPC4-208ENST00000461578 MYH1P12882 1939 aa16.84■□□□□ 0.29
PABPC4-208ENST00000461578 VCAM1P19320 739 aa16.84■□□□□ 0.29
PABPC4-208ENST00000461578 GRB14Q14449 540 aa16.84■□□□□ 0.29
PABPC4-208ENST00000461578 ACER1Q8TDN7 264 aa16.84■□□□□ 0.29
PABPC4-208ENST00000461578 BADQ92934 168 aa16.84■□□□□ 0.29
PABPC4-208ENST00000461578 PIH1D3Q9NQM4 214 aaKnown RBP16.84■□□□□ 0.29
PABPC4-208ENST00000461578 RLFQ13129 1914 aa16.84■□□□□ 0.29
PABPC4-208ENST00000461578 CYBAP13498 195 aa16.83■□□□□ 0.28
PABPC4-208ENST00000461578 VCANP13611 3396 aa16.83■□□□□ 0.28
PABPC4-208ENST00000461578 CYP7A1P22680 504 aa16.83■□□□□ 0.28
PABPC4-208ENST00000461578 ZAP70P43403 619 aa16.83■□□□□ 0.28
PABPC4-208ENST00000461578 USP5P45974 858 aa16.83■□□□□ 0.28
PABPC4-208ENST00000461578 USP14P54578 494 aa16.83■□□□□ 0.28
PABPC4-208ENST00000461578 CCDC158Q5M9N0 1113 aa16.83■□□□□ 0.28
PABPC4-208ENST00000461578 SLC39A5Q6ZMH5 540 aa16.83■□□□□ 0.28
PABPC4-208ENST00000461578 MIGA1Q8NAN2 632 aa16.83■□□□□ 0.28
PABPC4-208ENST00000461578 SPDYE16A6NNV3 312 aaPredicted RBP16.82■□□□□ 0.28
PABPC4-208ENST00000461578 KBTBD13C9JR72 458 aa16.82■□□□□ 0.28
PABPC4-208ENST00000461578 GNAI2P04899 355 aa16.82■□□□□ 0.28
PABPC4-208ENST00000461578 HOXC6P09630 235 aa16.82■□□□□ 0.28
PABPC4-208ENST00000461578 CT47B1P0C2W7 299 aaPredicted RBP16.82■□□□□ 0.28
PABPC4-208ENST00000461578 TRIM60Q495X7 471 aa16.82■□□□□ 0.28
PABPC4-208ENST00000461578 TNNI3KQ59H18 835 aa16.82■□□□□ 0.28
PABPC4-208ENST00000461578 DPP9Q86TI2 863 aa16.82■□□□□ 0.28
PABPC4-208ENST00000461578 TRMT2AQ8IZ69 625 aaKnown RBP16.82■□□□□ 0.28
PABPC4-208ENST00000461578 TTYH1Q9H313 450 aaPredicted RBP16.82■□□□□ 0.28
PABPC4-208ENST00000461578 RPAP3Q9H6T3 665 aaPredicted RBP16.82■□□□□ 0.28
PABPC4-208ENST00000461578 TNNQ9UQP3 1299 aa16.82■□□□□ 0.28
PABPC4-208ENST00000461578 FPGT-TNNI3KV9GXZ4 949 aa16.82■□□□□ 0.28
PABPC4-208ENST00000461578 RARSP54136 660 aaKnown RBP16.81■□□□□ 0.28
PABPC4-208ENST00000461578 OS9Q13438 667 aaPredicted RBP16.81■□□□□ 0.28
PABPC4-208ENST00000461578 ABCB5Q2M3G0 1257 aa16.81■□□□□ 0.28
PABPC4-208ENST00000461578 CERKLQ49MI3 558 aaPredicted RBP16.81■□□□□ 0.28
PABPC4-208ENST00000461578 TATDN1Q6P1N9 297 aa16.81■□□□□ 0.28
PABPC4-208ENST00000461578 SH3RF1Q7Z6J0 888 aa16.81■□□□□ 0.28
PABPC4-208ENST00000461578 ARRDC4Q8NCT1 418 aa16.81■□□□□ 0.28
PABPC4-208ENST00000461578 FERMT2Q96AC1 680 aa16.81■□□□□ 0.28
PABPC4-208ENST00000461578 KIAA1683Q9H0B3 1180 aa16.81■□□□□ 0.28
PABPC4-208ENST00000461578 SERPINB13Q9UIV8 391 aa16.81■□□□□ 0.28
PABPC4-208ENST00000461578 IDH1O75874 414 aaKnown RBP16.8■□□□□ 0.28
PABPC4-208ENST00000461578 FOSL2P15408 326 aa16.8■□□□□ 0.28
PABPC4-208ENST00000461578 ADORA2AP29274 412 aa16.8■□□□□ 0.28
PABPC4-208ENST00000461578 LBX2Q6XYB7 198 aa16.8■□□□□ 0.28
PABPC4-208ENST00000461578 CABP5Q9NP86 173 aa16.8■□□□□ 0.28
PABPC4-208ENST00000461578 PDLIM7Q9NR12 457 aa16.8■□□□□ 0.28
PABPC4-208ENST00000461578 PRUNE2Q8WUY3 3088 aa16.8■□□□□ 0.28
PABPC4-208ENST00000461578 TRIM43BA6NCK2 446 aa16.79■□□□□ 0.28
PABPC4-208ENST00000461578 ZNF316A6NFI3 1004 aaPredicted RBP16.79■□□□□ 0.28
PABPC4-208ENST00000461578 ADCYAP1R1P41586 468 aa16.79■□□□□ 0.28
PABPC4-208ENST00000461578 PRAMEF19Q5SWL8 479 aa16.79■□□□□ 0.28
PABPC4-208ENST00000461578 ARHGAP45Q92619 1136 aa16.79■□□□□ 0.28
PABPC4-208ENST00000461578 TRIM43Q96BQ3 446 aaPredicted RBP16.79■□□□□ 0.28
PABPC4-208ENST00000461578 MOV10L1Q9BXT6 1211 aaKnown RBP16.79■□□□□ 0.28
PABPC4-208ENST00000461578 PRDM6Q9NQX0 595 aa16.79■□□□□ 0.28
PABPC4-208ENST00000461578 IGHA2P01877 340 aa16.78■□□□□ 0.28
PABPC4-208ENST00000461578 SMAD3P84022 425 aaKnown RBP16.78■□□□□ 0.28
PABPC4-208ENST00000461578 OLFML2BQ68BL8 750 aa16.78■□□□□ 0.28
PABPC4-208ENST00000461578 MAGEB6Q8N7X4 407 aa16.78■□□□□ 0.28
PABPC4-208ENST00000461578 CLUAP1Q96AJ1 413 aa16.78■□□□□ 0.28
PABPC4-208ENST00000461578 EHD4Q9H223 541 aa16.78■□□□□ 0.28
PABPC4-208ENST00000461578 GPR108Q9NPR9 543 aa16.78■□□□□ 0.28
PABPC4-208ENST00000461578 TLR7Q9NYK1 1049 aaKnown RBP16.78■□□□□ 0.28
PABPC4-208ENST00000461578 ZNF236Q9UL36 1845 aa16.77■□□□□ 0.28
PABPC4-208ENST00000461578 SEPT4O43236 478 aa16.77■□□□□ 0.28
PABPC4-208ENST00000461578 COBLO75128 1261 aa16.77■□□□□ 0.28
PABPC4-208ENST00000461578 TRIM27P14373 513 aa16.77■□□□□ 0.28
PABPC4-208ENST00000461578 ERCC3P19447 782 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms