RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 RALGPS1Q5JS13 557 aa8.06□□□□□ -1.12
CFHR3-204ENST00000461558 MRPL41Q8IXM3 137 aaKnown RBP8.06□□□□□ -1.12
CFHR3-204ENST00000461558 FRMD6Q96NE9 622 aa8.06□□□□□ -1.12
CFHR3-204ENST00000461558 DPH2Q9BQC3 489 aaPredicted RBP8.06□□□□□ -1.12
CFHR3-204ENST00000461558 KCNK12Q9HB15 430 aa8.06□□□□□ -1.12
CFHR3-204ENST00000461558 TJP2Q9UDY2 1190 aa8.06□□□□□ -1.12
CFHR3-204ENST00000461558 TMEM59LQ9UK28 342 aa8.06□□□□□ -1.12
CFHR3-204ENST00000461558 LMNB1P20700 586 aa8.05□□□□□ -1.12
CFHR3-204ENST00000461558 ERVFC1P60507 584 aa8.05□□□□□ -1.12
CFHR3-204ENST00000461558 CCDC85BQ15834 202 aaPredicted RBP8.05□□□□□ -1.12
CFHR3-204ENST00000461558 MYLIPQ8WY64 445 aa8.05□□□□□ -1.12
CFHR3-204ENST00000461558 PCDHB5Q9Y5E4 795 aa8.05□□□□□ -1.12
CFHR3-204ENST00000461558 LDHBP07195 334 aaKnown RBP8.04□□□□□ -1.12
CFHR3-204ENST00000461558 GLDCP23378 1020 aa8.04□□□□□ -1.12
CFHR3-204ENST00000461558 ETV3P41162 512 aa8.04□□□□□ -1.12
CFHR3-204ENST00000461558 HK2P52789 917 aa8.04□□□□□ -1.12
CFHR3-204ENST00000461558 KRTAP5-3Q6L8H2 238 aa8.04□□□□□ -1.12
CFHR3-204ENST00000461558 TMEM87BQ96K49 555 aa8.04□□□□□ -1.12
CFHR3-204ENST00000461558 ETV2O00321 342 aaPredicted RBP8.03□□□□□ -1.12
CFHR3-204ENST00000461558 NUAK1O60285 661 aa8.03□□□□□ -1.12
CFHR3-204ENST00000461558 HPXP02790 462 aa8.03□□□□□ -1.12
CFHR3-204ENST00000461558 PGRP06401 933 aa8.03□□□□□ -1.12
CFHR3-204ENST00000461558 EIF4BP23588 611 aaKnown RBP8.03□□□□□ -1.12
CFHR3-204ENST00000461558 SLC6A19Q695T7 634 aa8.03□□□□□ -1.12
CFHR3-204ENST00000461558 CREG2Q8IUH2 290 aa8.03□□□□□ -1.12
CFHR3-204ENST00000461558 Q96M66 194 aa8.03□□□□□ -1.12
CFHR3-204ENST00000461558 WASH4PA8MWX3 477 aa8.02□□□□□ -1.13
CFHR3-204ENST00000461558 SUPT5HO00267 1087 aaKnown RBP8.02□□□□□ -1.13
CFHR3-204ENST00000461558 GNA15P30679 374 aa8.02□□□□□ -1.13
CFHR3-204ENST00000461558 AGMOQ6ZNB7 445 aa8.02□□□□□ -1.13
CFHR3-204ENST00000461558 DNAJB8Q8NHS0 232 aa8.02□□□□□ -1.13
CFHR3-204ENST00000461558 ADAMTS10Q9H324 1103 aa8.02□□□□□ -1.13
CFHR3-204ENST00000461558 SMG5Q9UPR3 1016 aaKnown RBP8.02□□□□□ -1.13
CFHR3-204ENST00000461558 IVNS1ABPQ9Y6Y0 642 aa8.02□□□□□ -1.13
CFHR3-204ENST00000461558 TPP2P29144 1249 aaPredicted RBP8.01□□□□□ -1.13
CFHR3-204ENST00000461558 LIG3P49916 1009 aa8.01□□□□□ -1.13
CFHR3-204ENST00000461558 LINC00310P59036 64 aa8.01□□□□□ -1.13
CFHR3-204ENST00000461558 GAB4Q2WGN9 574 aa8.01□□□□□ -1.13
CFHR3-204ENST00000461558 SLC26A8Q96RN1 970 aa8.01□□□□□ -1.13
CFHR3-204ENST00000461558 DUSP15Q9H1R2 295 aaPredicted RBP8.01□□□□□ -1.13
CFHR3-204ENST00000461558 HOXA5P20719 270 aa8□□□□□ -1.13
CFHR3-204ENST00000461558 PDE4BQ07343 736 aa8□□□□□ -1.13
CFHR3-204ENST00000461558 KCNN1Q92952 543 aa8□□□□□ -1.13
CFHR3-204ENST00000461558 MIR1-1HGQ9H1L0 117 aa8□□□□□ -1.13
CFHR3-204ENST00000461558 TRIT1Q9H3H1 467 aaKnown RBP8□□□□□ -1.13
CFHR3-204ENST00000461558 NISCHQ9Y2I1 1504 aa7.99□□□□□ -1.13
CFHR3-204ENST00000461558 TRHRP34981 398 aaPredicted RBP7.99□□□□□ -1.13
CFHR3-204ENST00000461558 MAP3K11Q16584 847 aa7.99□□□□□ -1.13
CFHR3-204ENST00000461558 MCATQ8IVS2 390 aaKnown RBP7.99□□□□□ -1.13
CFHR3-204ENST00000461558 RNF32Q9H0A6 362 aa7.99□□□□□ -1.13
CFHR3-204ENST00000461558 ADAM30Q9UKF2 790 aa7.99□□□□□ -1.13
CFHR3-204ENST00000461558 PRPF40AO75400 957 aaKnown RBP7.98□□□□□ -1.13
CFHR3-204ENST00000461558 TSNAXIP1Q2TAA8 658 aa7.98□□□□□ -1.13
CFHR3-204ENST00000461558 ACSF2Q96CM8 615 aaPredicted RBP7.98□□□□□ -1.13
CFHR3-204ENST00000461558 C20orf173Q96LM9 149 aa7.98□□□□□ -1.13
CFHR3-204ENST00000461558 SP110Q9HB58 689 aa7.98□□□□□ -1.13
CFHR3-204ENST00000461558 GPATCH2Q9NW75 528 aa7.98□□□□□ -1.13
CFHR3-204ENST00000461558 DUSP13Q9UII6 198 aa7.98□□□□□ -1.13
CFHR3-204ENST00000461558 CEP131Q9UPN4 1083 aa7.98□□□□□ -1.13
CFHR3-204ENST00000461558 SRFP11831 508 aa7.97□□□□□ -1.13
CFHR3-204ENST00000461558 TFE3P19532 575 aaPredicted RBP7.97□□□□□ -1.13
CFHR3-204ENST00000461558 PDZD8Q8NEN9 1154 aa7.97□□□□□ -1.13
CFHR3-204ENST00000461558 PPP1R13LQ8WUF5 828 aa7.97□□□□□ -1.13
CFHR3-204ENST00000461558 RELTQ969Z4 430 aa7.97□□□□□ -1.13
CFHR3-204ENST00000461558 GPR62Q9BZJ7 368 aa7.97□□□□□ -1.13
CFHR3-204ENST00000461558 JAG2Q9Y219 1238 aa7.97□□□□□ -1.13
CFHR3-204ENST00000461558 AK5Q9Y6K8 562 aa7.97□□□□□ -1.13
CFHR3-204ENST00000461558 ZGLP1P0C6A0 271 aa7.96□□□□□ -1.14
CFHR3-204ENST00000461558 RPL6Q02878 288 aaKnown RBP7.96□□□□□ -1.14
CFHR3-204ENST00000461558 EGR3Q06889 387 aa7.96□□□□□ -1.14
CFHR3-204ENST00000461558 TSPYL5Q86VY4 417 aaPredicted RBP7.96□□□□□ -1.14
CFHR3-204ENST00000461558 DTWD2Q8NBA8 298 aa7.96□□□□□ -1.14
CFHR3-204ENST00000461558 CYB5D2Q8WUJ1 264 aa7.96□□□□□ -1.14
CFHR3-204ENST00000461558 IRF2BPLQ9H1B7 796 aa7.96□□□□□ -1.14
CFHR3-204ENST00000461558 C19orf44Q9H6X5 657 aa7.96□□□□□ -1.14
CFHR3-204ENST00000461558 KCNA1Q09470 495 aa7.95□□□□□ -1.14
CFHR3-204ENST00000461558 LILRA2Q8N149 483 aa7.95□□□□□ -1.14
CFHR3-204ENST00000461558 PARD6AQ9NPB6 346 aa7.95□□□□□ -1.14
CFHR3-204ENST00000461558 KCNH3Q9ULD8 1083 aa7.95□□□□□ -1.14
CFHR3-204ENST00000461558 LTKP29376 864 aa7.94□□□□□ -1.14
CFHR3-204ENST00000461558 IRF2BP1Q8IU81 584 aa7.94□□□□□ -1.14
CFHR3-204ENST00000461558 OXR1Q8N573 874 aa7.94□□□□□ -1.14
CFHR3-204ENST00000461558 SLC6A17Q9H1V8 727 aa7.94□□□□□ -1.14
CFHR3-204ENST00000461558 RNF19AQ9NV58 838 aa7.94□□□□□ -1.14
CFHR3-204ENST00000461558 FITM1A5D6W6 292 aa7.93□□□□□ -1.14
CFHR3-204ENST00000461558 TIGD5Q53EQ6 642 aa7.93□□□□□ -1.14
CFHR3-204ENST00000461558 MEI1Q5TIA1 1274 aa7.93□□□□□ -1.14
CFHR3-204ENST00000461558 JARID2Q92833 1246 aaPredicted RBP7.93□□□□□ -1.14
CFHR3-204ENST00000461558 DUSP9Q99956 384 aaKnown RBP7.93□□□□□ -1.14
CFHR3-204ENST00000461558 TLR6Q9Y2C9 796 aa7.93□□□□□ -1.14
CFHR3-204ENST00000461558 PCDHA11Q9Y5I1 949 aa7.93□□□□□ -1.14
CFHR3-204ENST00000461558 CORINQ9Y5Q5 1042 aa7.93□□□□□ -1.14
CFHR3-204ENST00000461558 RLBP1P12271 317 aa7.92□□□□□ -1.14
CFHR3-204ENST00000461558 NR0B2Q15466 257 aa7.92□□□□□ -1.14
CFHR3-204ENST00000461558 FAM13CQ8NE31 585 aa7.92□□□□□ -1.14
CFHR3-204ENST00000461558 RNF141Q8WVD5 230 aa7.92□□□□□ -1.14
CFHR3-204ENST00000461558 DHX38Q92620 1227 aaKnown RBP7.92□□□□□ -1.14
CFHR3-204ENST00000461558 MCOLN1Q9GZU1 580 aa7.92□□□□□ -1.14
CFHR3-204ENST00000461558 ZCCHC4Q9H5U6 513 aa7.92□□□□□ -1.14
CFHR3-204ENST00000461558 UPK3BL1B0FP48 263 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms