RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 CCDC183Q5T5S1 534 aa7.88□□□□□ -1.15
MSH2-204ENST00000461394 USP17L1Q7RTZ2 530 aa7.88□□□□□ -1.15
MSH2-204ENST00000461394 TTC6Q86TZ1 520 aa7.88□□□□□ -1.15
MSH2-204ENST00000461394 CCDC125Q86Z20 511 aa7.88□□□□□ -1.15
MSH2-204ENST00000461394 KIAA0825Q8IV33 1275 aa7.88□□□□□ -1.15
MSH2-204ENST00000461394 RTKN2Q8IZC4 609 aa7.88□□□□□ -1.15
MSH2-204ENST00000461394 CMTR1Q8N1G2 835 aaKnown RBP7.88□□□□□ -1.15
MSH2-204ENST00000461394 CERS5Q8N5B7 392 aa7.88□□□□□ -1.15
MSH2-204ENST00000461394 LEO1Q8WVC0 666 aaPredicted RBP7.88□□□□□ -1.15
MSH2-204ENST00000461394 ANP32BQ92688 251 aaKnown RBP7.88□□□□□ -1.15
MSH2-204ENST00000461394 TMEM63CQ9P1W3 806 aa7.88□□□□□ -1.15
MSH2-204ENST00000461394 ISY1Q9ULR0 285 aaKnown RBP7.88□□□□□ -1.15
MSH2-204ENST00000461394 DDX60LQ5H9U9 1706 aaKnown RBP7.88□□□□□ -1.15
MSH2-204ENST00000461394 ROBO3Q96MS0 1386 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 LETM1O95202 739 aaPredicted RBP7.87□□□□□ -1.15
MSH2-204ENST00000461394 DEXIO95424 95 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 IFNAR1P17181 557 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 KIF5BP33176 963 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 CRKP46108 304 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 CDK8P49336 464 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 NT5C2P49902 561 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 MRE11P49959 708 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 PLCD1P51178 756 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 RCAN1P53805 252 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 PPP2R5BQ15173 497 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 GRIPAP1Q4V328 841 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 STRIP1Q5VSL9 837 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 KRT40Q6A162 431 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 ATL3Q6DD88 541 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 BRAPQ7Z569 592 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 ZSCAN29Q8IWY8 852 aaPredicted RBP7.87□□□□□ -1.15
MSH2-204ENST00000461394 REM2Q8IYK8 340 aaPredicted RBP7.87□□□□□ -1.15
MSH2-204ENST00000461394 LARGE2Q8N3Y3 721 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 SLC44A5Q8NCS7 719 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 FBXO18Q8NFZ0 1043 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 PIBF1Q8WXW3 757 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 FAM163AQ96GL9 167 aaPredicted RBP7.87□□□□□ -1.15
MSH2-204ENST00000461394 AIFM3Q96NN9 605 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 CRISPLD2Q9H0B8 497 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 GRPEL1Q9HAV7 217 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 STX8Q9UNK0 236 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 KIF13BQ9NQT8 1826 aa7.87□□□□□ -1.15
MSH2-204ENST00000461394 NID2Q14112 1375 aa7.86□□□□□ -1.15
MSH2-204ENST00000461394 SCN9AQ15858 1988 aa7.86□□□□□ -1.15
MSH2-204ENST00000461394 ELP1O95163 1332 aa7.86□□□□□ -1.15
MSH2-204ENST00000461394 MPHOSPH10O00566 681 aaKnown RBP7.86□□□□□ -1.15
MSH2-204ENST00000461394 FGRP09769 529 aa7.86□□□□□ -1.15
MSH2-204ENST00000461394 ME1P48163 572 aa7.86□□□□□ -1.15
MSH2-204ENST00000461394 RHBDL3P58872 404 aa7.86□□□□□ -1.15
MSH2-204ENST00000461394 ZNF445P59923 1031 aa7.86□□□□□ -1.15
MSH2-204ENST00000461394 KIAA2012Q0VF49 1180 aa7.86□□□□□ -1.15
MSH2-204ENST00000461394 SOGA3Q5TF21 947 aa7.86□□□□□ -1.15
MSH2-204ENST00000461394 LRSAM1Q6UWE0 723 aa7.86□□□□□ -1.15
MSH2-204ENST00000461394 HHIPL2Q6UWX4 724 aa7.86□□□□□ -1.15
MSH2-204ENST00000461394 CCDC73Q6ZRK6 1079 aa7.86□□□□□ -1.15
MSH2-204ENST00000461394 C16orf86Q6ZW13 317 aa7.86□□□□□ -1.15
MSH2-204ENST00000461394 NIM1KQ8IY84 436 aa7.86□□□□□ -1.15
MSH2-204ENST00000461394 CRACR2BQ8N4Y2 399 aaPredicted RBP7.86□□□□□ -1.15
MSH2-204ENST00000461394 TSPY26PQ9H489 355 aa7.86□□□□□ -1.15
MSH2-204ENST00000461394 BRMS1Q9HCU9 246 aa7.86□□□□□ -1.15
MSH2-204ENST00000461394 KCNQ5Q9NR82 932 aa7.86□□□□□ -1.15
MSH2-204ENST00000461394 ZNF277Q9NRM2 450 aaPredicted RBP7.86□□□□□ -1.15
MSH2-204ENST00000461394 GJB4Q9NTQ9 266 aa7.86□□□□□ -1.15
MSH2-204ENST00000461394 FAM217BQ9NTX9 383 aaPredicted RBP7.86□□□□□ -1.15
MSH2-204ENST00000461394 TMOD2Q9NZR1 351 aa7.86□□□□□ -1.15
MSH2-204ENST00000461394 PSME4Q14997 1843 aa7.86□□□□□ -1.15
MSH2-204ENST00000461394 ZNF646O15015 1829 aaPredicted RBP7.85□□□□□ -1.15
MSH2-204ENST00000461394 KIF28PB7ZC32 967 aa7.85□□□□□ -1.15
MSH2-204ENST00000461394 PLEKHA8P1O95397 391 aa7.85□□□□□ -1.15
MSH2-204ENST00000461394 RASA1P20936 1047 aa7.85□□□□□ -1.15
MSH2-204ENST00000461394 FKBP1AP62942 108 aaKnown RBP7.85□□□□□ -1.15
MSH2-204ENST00000461394 ATP2B2Q01814 1243 aa7.85□□□□□ -1.15
MSH2-204ENST00000461394 KIF23Q02241 960 aaPredicted RBP7.85□□□□□ -1.15
MSH2-204ENST00000461394 TCP10Q12799 353 aa7.85□□□□□ -1.15
MSH2-204ENST00000461394 R3HDM1Q15032 1099 aaKnown RBP7.85□□□□□ -1.15
MSH2-204ENST00000461394 NTRK3Q16288 839 aa7.85□□□□□ -1.15
MSH2-204ENST00000461394 DACT2Q5SW24 774 aa7.85□□□□□ -1.15
MSH2-204ENST00000461394 MYSM1Q5VVJ2 828 aa7.85□□□□□ -1.15
MSH2-204ENST00000461394 CDC42EP5Q6NZY7 148 aa7.85□□□□□ -1.15
MSH2-204ENST00000461394 DGKHQ86XP1 1220 aa7.85□□□□□ -1.15
MSH2-204ENST00000461394 CCAR1Q8IX12 1150 aaKnown RBP7.85□□□□□ -1.15
MSH2-204ENST00000461394 PNMA1Q8ND90 353 aa7.85□□□□□ -1.15
MSH2-204ENST00000461394 USP28Q96RU2 1077 aa7.85□□□□□ -1.15
MSH2-204ENST00000461394 RNF26Q9BY78 433 aaPredicted RBP7.85□□□□□ -1.15
MSH2-204ENST00000461394 FTOQ9C0B1 505 aaKnown RBP eCLIP7.85□□□□□ -1.15
MSH2-204ENST00000461394 OSBPL5Q9H0X9 879 aaPredicted RBP7.85□□□□□ -1.15
MSH2-204ENST00000461394 NUP62CLQ9H1M0 184 aa7.85□□□□□ -1.15
MSH2-204ENST00000461394 PIM2Q9P1W9 311 aa7.85□□□□□ -1.15
MSH2-204ENST00000461394 MKRN1Q9UHC7 482 aaKnown RBP7.85□□□□□ -1.15
MSH2-204ENST00000461394 HDAC9Q9UKV0 1011 aa7.85□□□□□ -1.15
MSH2-204ENST00000461394 KCNJ14Q9UNX9 436 aa7.85□□□□□ -1.15
MSH2-204ENST00000461394 MYH4Q9Y623 1939 aa7.85□□□□□ -1.15
MSH2-204ENST00000461394 hCG_1642624A0A1W2PR95 340 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 FSD2A1L4K1 749 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 PRPF3O43395 683 aaKnown RBP7.84□□□□□ -1.15
MSH2-204ENST00000461394 RAD21O60216 631 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 RAD17O75943 681 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 MMP1P03956 469 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 ATP2B1P20020 1258 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 GUCY1A2P33402 732 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms