RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 EEPD1Q7L9B9 569 aa4.59□□□□□ -1.67
VCL-203ENST00000461383 MCATQ8IVS2 390 aaKnown RBP4.59□□□□□ -1.67
VCL-203ENST00000461383 NLGN1Q8N2Q7 840 aa4.59□□□□□ -1.67
VCL-203ENST00000461383 TAB3Q8N5C8 712 aaPredicted RBP4.59□□□□□ -1.67
VCL-203ENST00000461383 RNF214Q8ND24 703 aa4.59□□□□□ -1.67
VCL-203ENST00000461383 TMEM87BQ96K49 555 aa4.59□□□□□ -1.67
VCL-203ENST00000461383 CNNM2Q9H8M5 875 aa4.59□□□□□ -1.67
VCL-203ENST00000461383 PFDN2Q9UHV9 154 aa4.59□□□□□ -1.67
VCL-203ENST00000461383 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.59□□□□□ -1.67
VCL-203ENST00000461383 MSRB2Q9Y3D2 182 aa4.59□□□□□ -1.67
VCL-203ENST00000461383 PCDHGC5Q9Y5F6 944 aa4.59□□□□□ -1.67
VCL-203ENST00000461383 MEGF11A6BM72 1044 aa4.58□□□□□ -1.68
VCL-203ENST00000461383 UPK3BL1B0FP48 263 aa4.58□□□□□ -1.68
VCL-203ENST00000461383 UPK3BL2E5RIL1 263 aa4.58□□□□□ -1.68
VCL-203ENST00000461383 TNFRSF10CO14798 259 aa4.58□□□□□ -1.68
VCL-203ENST00000461383 DNAJA2O60884 412 aa4.58□□□□□ -1.68
VCL-203ENST00000461383 DRD2P14416 443 aa4.58□□□□□ -1.68
VCL-203ENST00000461383 POLR2BP30876 1174 aaKnown RBP4.58□□□□□ -1.68
VCL-203ENST00000461383 USP11P51784 963 aa4.58□□□□□ -1.68
VCL-203ENST00000461383 SLC7A5Q01650 507 aa4.58□□□□□ -1.68
VCL-203ENST00000461383 SOX4Q06945 474 aaPredicted RBP4.58□□□□□ -1.68
VCL-203ENST00000461383 ZYXQ15942 572 aaKnown RBP4.58□□□□□ -1.68
VCL-203ENST00000461383 BBS9Q3SYG4 887 aa4.58□□□□□ -1.68
VCL-203ENST00000461383 TAF7LQ5H9L4 462 aa4.58□□□□□ -1.68
VCL-203ENST00000461383 LCE3BQ5TA77 95 aa4.58□□□□□ -1.68
VCL-203ENST00000461383 ANKRD34AQ69YU3 496 aa4.58□□□□□ -1.68
VCL-203ENST00000461383 KIAA1211LQ6NV74 962 aa4.58□□□□□ -1.68
VCL-203ENST00000461383 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.58□□□□□ -1.68
VCL-203ENST00000461383 AGGF1Q8N302 714 aaeCLIP4.58□□□□□ -1.68
VCL-203ENST00000461383 SMG8Q8ND04 991 aaKnown RBP4.58□□□□□ -1.68
VCL-203ENST00000461383 MICAL1Q8TDZ2 1067 aa4.58□□□□□ -1.68
VCL-203ENST00000461383 SH3TC2Q8TF17 1288 aa4.58□□□□□ -1.68
VCL-203ENST00000461383 DHRS1Q96LJ7 313 aa4.58□□□□□ -1.68
VCL-203ENST00000461383 RNPC3Q96LT9 517 aaKnown RBP4.58□□□□□ -1.68
VCL-203ENST00000461383 SLC9A7Q96T83 725 aa4.58□□□□□ -1.68
VCL-203ENST00000461383 KIF2CQ99661 725 aa4.58□□□□□ -1.68
VCL-203ENST00000461383 DPH2Q9BQC3 489 aaPredicted RBP4.58□□□□□ -1.68
VCL-203ENST00000461383 SLKQ9H2G2 1235 aaPredicted RBP4.58□□□□□ -1.68
VCL-203ENST00000461383 SUGCTQ9HAC7 445 aa4.58□□□□□ -1.68
VCL-203ENST00000461383 DISC1Q9NRI5 854 aa4.58□□□□□ -1.68
VCL-203ENST00000461383 TJP2Q9UDY2 1190 aa4.58□□□□□ -1.68
VCL-203ENST00000461383 PCDHB10Q9UN67 800 aa4.58□□□□□ -1.68
VCL-203ENST00000461383 KDM2BQ8NHM5 1336 aa4.57□□□□□ -1.68
VCL-203ENST00000461383 AGRPO00253 132 aa4.57□□□□□ -1.68
VCL-203ENST00000461383 GSC2O15499 205 aa4.57□□□□□ -1.68
VCL-203ENST00000461383 CDC45O75419 566 aa4.57□□□□□ -1.68
VCL-203ENST00000461383 ACRP10323 421 aa4.57□□□□□ -1.68
VCL-203ENST00000461383 NAT2P11245 290 aa4.57□□□□□ -1.68
VCL-203ENST00000461383 GLB1P16278 677 aa4.57□□□□□ -1.68
VCL-203ENST00000461383 FSTP19883 344 aa4.57□□□□□ -1.68
VCL-203ENST00000461383 RAB6AP20340 208 aa4.57□□□□□ -1.68
VCL-203ENST00000461383 CD97P48960 835 aa4.57□□□□□ -1.68
VCL-203ENST00000461383 RING1Q06587 406 aa4.57□□□□□ -1.68
VCL-203ENST00000461383 SSRP1Q08945 709 aaKnown RBP4.57□□□□□ -1.68
VCL-203ENST00000461383 TCEAL1Q15170 157 aa4.57□□□□□ -1.68
VCL-203ENST00000461383 EGFLAMQ63HQ2 1017 aa4.57□□□□□ -1.68
VCL-203ENST00000461383 HOMER1Q86YM7 354 aa4.57□□□□□ -1.68
VCL-203ENST00000461383 KRTAP19-1Q8IUB9 90 aa4.57□□□□□ -1.68
VCL-203ENST00000461383 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.57□□□□□ -1.68
VCL-203ENST00000461383 MRPL41Q8IXM3 137 aaKnown RBP4.57□□□□□ -1.68
VCL-203ENST00000461383 SLFN12Q8IYM2 578 aa4.57□□□□□ -1.68
VCL-203ENST00000461383 SMYD4Q8IYR2 804 aaPredicted RBP4.57□□□□□ -1.68
VCL-203ENST00000461383 ST13P5Q8NFI4 369 aaPredicted RBP4.57□□□□□ -1.68
VCL-203ENST00000461383 XAGE3Q8WTP9 111 aa4.57□□□□□ -1.68
VCL-203ENST00000461383 APPBP2Q92624 585 aa4.57□□□□□ -1.68
VCL-203ENST00000461383 PPP1R14AQ96A00 147 aa4.57□□□□□ -1.68
VCL-203ENST00000461383 CCDC74BQ96LY2 380 aa4.57□□□□□ -1.68
VCL-203ENST00000461383 YIPF2Q9BWQ6 316 aa4.57□□□□□ -1.68
VCL-203ENST00000461383 FAM86C1Q9NVL1 165 aa4.57□□□□□ -1.68
VCL-203ENST00000461383 FANCLQ9NW38 375 aa4.57□□□□□ -1.68
VCL-203ENST00000461383 SBNO2Q9Y2G9 1366 aa4.56□□□□□ -1.68
VCL-203ENST00000461383 LTBP3Q9NS15 1303 aa4.56□□□□□ -1.68
VCL-203ENST00000461383 KIAA1324LA8MWY0 1029 aaPredicted RBP4.56□□□□□ -1.68
VCL-203ENST00000461383 ENPP3O14638 875 aa4.56□□□□□ -1.68
VCL-203ENST00000461383 RGS13O14921 159 aa4.56□□□□□ -1.68
VCL-203ENST00000461383 CLEC3AO75596 197 aa4.56□□□□□ -1.68
VCL-203ENST00000461383 CCNFP41002 786 aa4.56□□□□□ -1.68
VCL-203ENST00000461383 UVSSAQ2YD98 709 aa4.56□□□□□ -1.68
VCL-203ENST00000461383 SV2CQ496J9 727 aa4.56□□□□□ -1.68
VCL-203ENST00000461383 RNF187Q5TA31 235 aaPredicted RBP4.56□□□□□ -1.68
VCL-203ENST00000461383 PRAMEF13Q5VWM6 474 aa4.56□□□□□ -1.68
VCL-203ENST00000461383 ZNF662Q6ZS27 426 aa4.56□□□□□ -1.68
VCL-203ENST00000461383 CCDC144CPQ8IYA2 1237 aa4.56□□□□□ -1.68
VCL-203ENST00000461383 LILRB2Q8N423 598 aa4.56□□□□□ -1.68
VCL-203ENST00000461383 ISL2Q96A47 359 aa4.56□□□□□ -1.68
VCL-203ENST00000461383 SLC6A18Q96N87 628 aa4.56□□□□□ -1.68
VCL-203ENST00000461383 CEP41Q9BYV8 373 aa4.56□□□□□ -1.68
VCL-203ENST00000461383 FOXQ1Q9C009 403 aa4.56□□□□□ -1.68
VCL-203ENST00000461383 FBRSQ9HAH7 460 aa4.56□□□□□ -1.68
VCL-203ENST00000461383 LRP2BPQ9P2M1 347 aa4.56□□□□□ -1.68
VCL-203ENST00000461383 PCOLCE2Q9UKZ9 415 aa4.56□□□□□ -1.68
VCL-203ENST00000461383 ACTL7BQ9Y614 415 aa4.56□□□□□ -1.68
VCL-203ENST00000461383 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.55□□□□□ -1.68
VCL-203ENST00000461383 ESYT3A0FGR9 886 aa4.55□□□□□ -1.68
VCL-203ENST00000461383 IQCA1LA6NCM1 817 aa4.55□□□□□ -1.68
VCL-203ENST00000461383 SUSD5O60279 629 aa4.55□□□□□ -1.68
VCL-203ENST00000461383 LRIG2O94898 1065 aa4.55□□□□□ -1.68
VCL-203ENST00000461383 ALX3O95076 343 aa4.55□□□□□ -1.68
VCL-203ENST00000461383 TIAF1O95411 115 aa4.55□□□□□ -1.68
VCL-203ENST00000461383 CST3P01034 146 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms