RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 PDE8AO60658 829 aa8.76□□□□□ -1.01
NUP50-212ENST00000461194 IARSP41252 1262 aaKnown RBP8.76□□□□□ -1.01
NUP50-212ENST00000461194 ZNF211Q13398 564 aaPredicted RBP8.76□□□□□ -1.01
NUP50-212ENST00000461194 LBRQ14739 615 aaKnown RBP8.76□□□□□ -1.01
NUP50-212ENST00000461194 CWF19L2Q2TBE0 894 aaKnown RBP8.76□□□□□ -1.01
NUP50-212ENST00000461194 SLC51AQ86UW1 340 aa8.76□□□□□ -1.01
NUP50-212ENST00000461194 LINS1Q8NG48 757 aa8.76□□□□□ -1.01
NUP50-212ENST00000461194 JARID2Q92833 1246 aaPredicted RBP8.76□□□□□ -1.01
NUP50-212ENST00000461194 STIM2Q9P246 746 aa8.76□□□□□ -1.01
NUP50-212ENST00000461194 FER1L6Q2WGJ9 1857 aa8.75□□□□□ -1.01
NUP50-212ENST00000461194 GPR25O00155 361 aa8.75□□□□□ -1.01
NUP50-212ENST00000461194 ATXN7O15265 892 aaPredicted RBP8.75□□□□□ -1.01
NUP50-212ENST00000461194 TOMM70O94826 608 aa8.75□□□□□ -1.01
NUP50-212ENST00000461194 BRD2P25440 801 aaKnown RBP8.75□□□□□ -1.01
NUP50-212ENST00000461194 GCKRQ14397 625 aa8.75□□□□□ -1.01
NUP50-212ENST00000461194 HIF1AQ16665 826 aa8.75□□□□□ -1.01
NUP50-212ENST00000461194 CCDC152Q4G0S7 254 aa8.75□□□□□ -1.01
NUP50-212ENST00000461194 FIGNL1Q6PIW4 674 aa8.75□□□□□ -1.01
NUP50-212ENST00000461194 NPAS3Q8IXF0 933 aa8.75□□□□□ -1.01
NUP50-212ENST00000461194 SUPT20HQ8NEM7 779 aa8.75□□□□□ -1.01
NUP50-212ENST00000461194 HELQQ8TDG4 1101 aa8.75□□□□□ -1.01
NUP50-212ENST00000461194 CELF1Q92879 486 aaKnown RBP8.75□□□□□ -1.01
NUP50-212ENST00000461194 CEP63Q96MT8 703 aa8.75□□□□□ -1.01
NUP50-212ENST00000461194 RTFDC1Q9BY42 306 aaPredicted RBP8.75□□□□□ -1.01
NUP50-212ENST00000461194 VPS33BQ9H267 617 aa8.75□□□□□ -1.01
NUP50-212ENST00000461194 RRAGCQ9HB90 399 aa8.75□□□□□ -1.01
NUP50-212ENST00000461194 PCDHGC4Q9Y5F7 938 aa8.75□□□□□ -1.01
NUP50-212ENST00000461194 IVNS1ABPQ9Y6Y0 642 aa8.75□□□□□ -1.01
NUP50-212ENST00000461194 SBF1O95248 1867 aa8.74□□□□□ -1.01
NUP50-212ENST00000461194 F6X3S4 739 aa8.74□□□□□ -1.01
NUP50-212ENST00000461194 FZD9O00144 591 aa8.74□□□□□ -1.01
NUP50-212ENST00000461194 DDNO94850 711 aaPredicted RBP8.74□□□□□ -1.01
NUP50-212ENST00000461194 MICAL2O94851 1124 aa8.74□□□□□ -1.01
NUP50-212ENST00000461194 VEGFAP15692 232 aaPredicted RBP8.74□□□□□ -1.01
NUP50-212ENST00000461194 CASP7P55210 303 aa8.74□□□□□ -1.01
NUP50-212ENST00000461194 RPS8P62241 208 aaKnown RBP8.74□□□□□ -1.01
NUP50-212ENST00000461194 FAM26DQ5JW98 314 aa8.74□□□□□ -1.01
NUP50-212ENST00000461194 BEND3Q5T5X7 828 aa8.74□□□□□ -1.01
NUP50-212ENST00000461194 DPP8Q6V1X1 898 aaPredicted RBP8.74□□□□□ -1.01
NUP50-212ENST00000461194 GPR161Q8N6U8 529 aaKnown RBP8.74□□□□□ -1.01
NUP50-212ENST00000461194 NANOS1Q8WY41 292 aaKnown RBP8.74□□□□□ -1.01
NUP50-212ENST00000461194 JDP2Q8WYK2 163 aa8.74□□□□□ -1.01
NUP50-212ENST00000461194 PLA2G12BQ9BX93 195 aa8.74□□□□□ -1.01
NUP50-212ENST00000461194 SEC31BQ9NQW1 1179 aa8.74□□□□□ -1.01
NUP50-212ENST00000461194 GNEQ9Y223 722 aaKnown RBP8.74□□□□□ -1.01
NUP50-212ENST00000461194 TGFBR3LH3BV60 316 aa8.73□□□□□ -1.01
NUP50-212ENST00000461194 KHNYNO15037 678 aaKnown RBP8.73□□□□□ -1.01
NUP50-212ENST00000461194 ZBTB39O15060 712 aa8.73□□□□□ -1.01
NUP50-212ENST00000461194 PPIP5K2O43314 1243 aa8.73□□□□□ -1.01
NUP50-212ENST00000461194 CT47B1P0C2W7 299 aaPredicted RBP8.73□□□□□ -1.01
NUP50-212ENST00000461194 CTSWP56202 376 aa8.73□□□□□ -1.01
NUP50-212ENST00000461194 UBAP2LQ14157 1087 aaKnown RBP8.73□□□□□ -1.01
NUP50-212ENST00000461194 ALDH1L2Q3SY69 923 aa8.73□□□□□ -1.01
NUP50-212ENST00000461194 UBE3BQ7Z3V4 1068 aa8.73□□□□□ -1.01
NUP50-212ENST00000461194 BTLAQ7Z6A9 289 aa8.73□□□□□ -1.01
NUP50-212ENST00000461194 ETFBKMTQ8IXQ9 262 aa8.73□□□□□ -1.01
NUP50-212ENST00000461194 C16orf71Q8IYS4 520 aaPredicted RBP8.73□□□□□ -1.01
NUP50-212ENST00000461194 TTLL11Q8NHH1 800 aa8.73□□□□□ -1.01
NUP50-212ENST00000461194 SSH1Q8WYL5 1049 aa8.73□□□□□ -1.01
NUP50-212ENST00000461194 ZNF775Q96BV0 537 aaPredicted RBP8.73□□□□□ -1.01
NUP50-212ENST00000461194 TRERF1Q96PN7 1200 aa8.73□□□□□ -1.01
NUP50-212ENST00000461194 DCDC2BA2VCK2 349 aa8.72□□□□□ -1.01
NUP50-212ENST00000461194 PATL2C9JE40 543 aaKnown RBP8.72□□□□□ -1.01
NUP50-212ENST00000461194 BNIP3LO60238 219 aa8.72□□□□□ -1.01
NUP50-212ENST00000461194 ALDH1L1O75891 902 aa8.72□□□□□ -1.01
NUP50-212ENST00000461194 EIF6P56537 245 aaKnown RBP8.72□□□□□ -1.01
NUP50-212ENST00000461194 KIAA2012Q0VF49 1180 aa8.72□□□□□ -1.01
NUP50-212ENST00000461194 AOC3Q16853 763 aa8.72□□□□□ -1.01
NUP50-212ENST00000461194 TREML1Q86YW5 311 aa8.72□□□□□ -1.01
NUP50-212ENST00000461194 ANKRD18AQ8IVF6 992 aa8.72□□□□□ -1.01
NUP50-212ENST00000461194 NIM1KQ8IY84 436 aa8.72□□□□□ -1.01
NUP50-212ENST00000461194 ABHD17AQ96GS6 310 aa8.72□□□□□ -1.01
NUP50-212ENST00000461194 CDC5LQ99459 802 aaKnown RBP8.72□□□□□ -1.01
NUP50-212ENST00000461194 NSFL1CQ9UNZ2 370 aaKnown RBP8.72□□□□□ -1.01
NUP50-212ENST00000461194 PTPRCP08575 1304 aa8.72□□□□□ -1.01
NUP50-212ENST00000461194 ZNF541Q9H0D2 1346 aa8.72□□□□□ -1.01
NUP50-212ENST00000461194 RTL9Q8NET4 1388 aa8.72□□□□□ -1.01
NUP50-212ENST00000461194 DDX60Q8IY21 1712 aaKnown RBP8.71□□□□□ -1.01
NUP50-212ENST00000461194 CACNA1SQ13698 1873 aa8.71□□□□□ -1.01
NUP50-212ENST00000461194 IQCA1LA6NCM1 817 aa8.71□□□□□ -1.02
NUP50-212ENST00000461194 ICMTO60725 284 aa8.71□□□□□ -1.02
NUP50-212ENST00000461194 CSF1RP07333 972 aa8.71□□□□□ -1.02
NUP50-212ENST00000461194 GPSM2P81274 684 aa8.71□□□□□ -1.02
NUP50-212ENST00000461194 TNP2Q05952 138 aa8.71□□□□□ -1.02
NUP50-212ENST00000461194 AAMPQ13685 434 aa8.71□□□□□ -1.02
NUP50-212ENST00000461194 SAMD5Q5TGI4 173 aa8.71□□□□□ -1.02
NUP50-212ENST00000461194 SLC4A10Q6U841 1118 aa8.71□□□□□ -1.02
NUP50-212ENST00000461194 GPC2Q8N158 579 aa8.71□□□□□ -1.02
NUP50-212ENST00000461194 SRCIN1Q9C0H9 1055 aa8.71□□□□□ -1.02
NUP50-212ENST00000461194 GREM2Q9H772 168 aa8.71□□□□□ -1.02
NUP50-212ENST00000461194 PODXL2Q9NZ53 605 aa8.71□□□□□ -1.02
NUP50-212ENST00000461194 EGFL7Q9UHF1 273 aa8.71□□□□□ -1.02
NUP50-212ENST00000461194 DMGDHQ9UI17 866 aaKnown RBP8.71□□□□□ -1.02
NUP50-212ENST00000461194 COL4A5P29400 1685 aa8.7□□□□□ -1.02
NUP50-212ENST00000461194 H3BRB1 525 aa8.7□□□□□ -1.02
NUP50-212ENST00000461194 GRM8O00222 908 aa8.7□□□□□ -1.02
NUP50-212ENST00000461194 OPLAHO14841 1288 aa8.7□□□□□ -1.02
NUP50-212ENST00000461194 FAM13AO94988 1023 aa8.7□□□□□ -1.02
NUP50-212ENST00000461194 MAPTP10636 758 aaKnown RBP8.7□□□□□ -1.02
NUP50-212ENST00000461194 HSPA6P17066 643 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms