RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 ZYXQ15942 572 aaKnown RBP17.85■□□□□ 0.45
SMPD4-216ENST00000461187 ABCB5Q2M3G0 1257 aa17.85■□□□□ 0.45
SMPD4-216ENST00000461187 SLC9C2Q5TAH2 1124 aa17.85■□□□□ 0.45
SMPD4-216ENST00000461187 MAP3K21Q5TCX8 1036 aa17.85■□□□□ 0.45
SMPD4-216ENST00000461187 GPR142Q7Z601 462 aa17.85■□□□□ 0.45
SMPD4-216ENST00000461187 NECAB2Q7Z6G3 386 aa17.85■□□□□ 0.45
SMPD4-216ENST00000461187 SIRT2Q8IXJ6 389 aa17.85■□□□□ 0.45
SMPD4-216ENST00000461187 RPAP2Q8IXW5 612 aaPredicted RBP17.85■□□□□ 0.45
SMPD4-216ENST00000461187 CLASRPQ8N2M8 674 aaKnown RBP17.85■□□□□ 0.45
SMPD4-216ENST00000461187 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.85■□□□□ 0.45
SMPD4-216ENST00000461187 USP6NLQ92738 828 aa17.85■□□□□ 0.45
SMPD4-216ENST00000461187 KIF1BPQ96EK5 621 aa17.85■□□□□ 0.45
SMPD4-216ENST00000461187 PAGR1Q9BTK6 254 aa17.85■□□□□ 0.45
SMPD4-216ENST00000461187 ZBTB40Q9NUA8 1239 aa17.85■□□□□ 0.45
SMPD4-216ENST00000461187 LAMA3Q16787 3333 aa17.85■□□□□ 0.45
SMPD4-216ENST00000461187 DNAH12Q6ZR08 3092 aa17.85■□□□□ 0.45
SMPD4-216ENST00000461187 SMCHD1A6NHR9 2005 aa17.84■□□□□ 0.45
SMPD4-216ENST00000461187 USP17L15C9J2P7 530 aa17.84■□□□□ 0.45
SMPD4-216ENST00000461187 USP17L13C9JLJ4 530 aa17.84■□□□□ 0.45
SMPD4-216ENST00000461187 USP17L11C9JVI0 530 aa17.84■□□□□ 0.45
SMPD4-216ENST00000461187 USP17L18D6R9N7 530 aa17.84■□□□□ 0.45
SMPD4-216ENST00000461187 USP17L22D6RA61 530 aa17.84■□□□□ 0.45
SMPD4-216ENST00000461187 USP17L17D6RBQ6 530 aa17.84■□□□□ 0.45
SMPD4-216ENST00000461187 USP17L19D6RCP7 530 aa17.84■□□□□ 0.45
SMPD4-216ENST00000461187 USP17L20D6RJB6 530 aa17.84■□□□□ 0.45
SMPD4-216ENST00000461187 APBB1O00213 710 aa17.84■□□□□ 0.45
SMPD4-216ENST00000461187 GUCY1A2P33402 732 aa17.84■□□□□ 0.45
SMPD4-216ENST00000461187 MNX1P50219 401 aaPredicted RBP17.84■□□□□ 0.45
SMPD4-216ENST00000461187 USP14P54578 494 aa17.84■□□□□ 0.45
SMPD4-216ENST00000461187 GABPAQ06546 454 aa17.84■□□□□ 0.45
SMPD4-216ENST00000461187 USP17L24Q0WX57 530 aa17.84■□□□□ 0.45
SMPD4-216ENST00000461187 ACER1Q8TDN7 264 aa17.84■□□□□ 0.45
SMPD4-216ENST00000461187 FEZ1Q99689 392 aa17.84■□□□□ 0.45
SMPD4-216ENST00000461187 KIAA1683Q9H0B3 1180 aa17.84■□□□□ 0.45
SMPD4-216ENST00000461187 ZNF532Q9HCE3 1301 aa17.83■□□□□ 0.44
SMPD4-216ENST00000461187 TCRBV5S4A2TA0A5A2 114 aa17.83■□□□□ 0.44
SMPD4-216ENST00000461187 GOLIM4O00461 696 aa17.83■□□□□ 0.44
SMPD4-216ENST00000461187 CNMDO75829 334 aa17.83■□□□□ 0.44
SMPD4-216ENST00000461187 POLR3DP05423 398 aaPredicted RBP17.83■□□□□ 0.44
SMPD4-216ENST00000461187 PRKAR2AP13861 404 aaKnown RBP17.83■□□□□ 0.44
SMPD4-216ENST00000461187 EVX2Q03828 476 aa17.83■□□□□ 0.44
SMPD4-216ENST00000461187 PDE3AQ14432 1141 aa17.83■□□□□ 0.44
SMPD4-216ENST00000461187 MORN1Q5T089 497 aa17.83■□□□□ 0.44
SMPD4-216ENST00000461187 CATSPERGQ6ZRH7 1159 aa17.83■□□□□ 0.44
SMPD4-216ENST00000461187 PLEKHH3Q7Z736 793 aa17.83■□□□□ 0.44
SMPD4-216ENST00000461187 CRNKL1Q9BZJ0 848 aaKnown RBP17.83■□□□□ 0.44
SMPD4-216ENST00000461187 CABP5Q9NP86 173 aa17.83■□□□□ 0.44
SMPD4-216ENST00000461187 OGDHLQ9ULD0 1010 aa17.83■□□□□ 0.44
SMPD4-216ENST00000461187 DDX19BQ9UMR2 479 aa17.83■□□□□ 0.44
SMPD4-216ENST00000461187 COG6Q9Y2V7 657 aa17.83■□□□□ 0.44
SMPD4-216ENST00000461187 RABGAP1Q9Y3P9 1069 aa17.83■□□□□ 0.44
SMPD4-216ENST00000461187 PLXNA1Q9UIW2 1896 aa17.83■□□□□ 0.44
SMPD4-216ENST00000461187 ZNF236Q9UL36 1845 aa17.82■□□□□ 0.44
SMPD4-216ENST00000461187 HMMRO75330 724 aa17.82■□□□□ 0.44
SMPD4-216ENST00000461187 IFIT2P09913 472 aaKnown RBP17.82■□□□□ 0.44
SMPD4-216ENST00000461187 VCAM1P19320 739 aa17.82■□□□□ 0.44
SMPD4-216ENST00000461187 CCAR1Q8IX12 1150 aaKnown RBP17.82■□□□□ 0.44
SMPD4-216ENST00000461187 TRMT44Q8IYL2 757 aaKnown RBP17.82■□□□□ 0.44
SMPD4-216ENST00000461187 DNAJC2Q99543 621 aaKnown RBP17.82■□□□□ 0.44
SMPD4-216ENST00000461187 ZKSCAN1P17029 563 aaPredicted RBP17.81■□□□□ 0.44
SMPD4-216ENST00000461187 RGS2P41220 211 aa17.81■□□□□ 0.44
SMPD4-216ENST00000461187 CACNB2Q08289 660 aaPredicted RBP17.81■□□□□ 0.44
SMPD4-216ENST00000461187 SEPT2Q15019 361 aa17.81■□□□□ 0.44
SMPD4-216ENST00000461187 CCL14Q16627 93 aa17.81■□□□□ 0.44
SMPD4-216ENST00000461187 LBX2Q6XYB7 198 aa17.81■□□□□ 0.44
SMPD4-216ENST00000461187 LCORLQ8N3X6 602 aa17.81■□□□□ 0.44
SMPD4-216ENST00000461187 SDR42E1Q8WUS8 393 aa17.81■□□□□ 0.44
SMPD4-216ENST00000461187 EDC3Q96F86 508 aaKnown RBP17.81■□□□□ 0.44
SMPD4-216ENST00000461187 NBPF3Q9H094 633 aa17.81■□□□□ 0.44
SMPD4-216ENST00000461187 MCM9Q9NXL9 1143 aa17.81■□□□□ 0.44
SMPD4-216ENST00000461187 MYH4Q9Y623 1939 aa17.8■□□□□ 0.44
SMPD4-216ENST00000461187 RAB11FIP3O75154 756 aa17.8■□□□□ 0.44
SMPD4-216ENST00000461187 APBA2Q99767 749 aa17.8■□□□□ 0.44
SMPD4-216ENST00000461187 DCP1AQ9NPI6 582 aaPredicted RBP17.8■□□□□ 0.44
SMPD4-216ENST00000461187 GREB1LQ9C091 1923 aaPredicted RBP17.79■□□□□ 0.44
SMPD4-216ENST00000461187 SPDYE16A6NNV3 312 aaPredicted RBP17.79■□□□□ 0.44
SMPD4-216ENST00000461187 CCND3P30281 292 aaPredicted RBP17.79■□□□□ 0.44
SMPD4-216ENST00000461187 CCNA1P78396 465 aa17.79■□□□□ 0.44
SMPD4-216ENST00000461187 MAP2K5Q13163 448 aa17.79■□□□□ 0.44
SMPD4-216ENST00000461187 SLFNL1Q499Z3 407 aa17.79■□□□□ 0.44
SMPD4-216ENST00000461187 BCL11AQ9H165 835 aa17.79■□□□□ 0.44
SMPD4-216ENST00000461187 C11orf49Q9H6J7 331 aa17.79■□□□□ 0.44
SMPD4-216ENST00000461187 RPAP3Q9H6T3 665 aaPredicted RBP17.79■□□□□ 0.44
SMPD4-216ENST00000461187 BTBD7Q9P203 1132 aa17.79■□□□□ 0.44
SMPD4-216ENST00000461187 STAP2Q9UGK3 403 aa17.79■□□□□ 0.44
SMPD4-216ENST00000461187 A0A1W2PPC1 479 aa17.78■□□□□ 0.44
SMPD4-216ENST00000461187 A0A1W2PRG0 241 aa17.78■□□□□ 0.44
SMPD4-216ENST00000461187 CYP2D6P10635 497 aa17.78■□□□□ 0.44
SMPD4-216ENST00000461187 ADD2P35612 726 aa17.78■□□□□ 0.44
SMPD4-216ENST00000461187 LHX8Q68G74 356 aa17.78■□□□□ 0.44
SMPD4-216ENST00000461187 C7orf61Q8IZ16 206 aa17.78■□□□□ 0.44
SMPD4-216ENST00000461187 BOLA2Q9H3K6 86 aa17.78■□□□□ 0.44
SMPD4-216ENST00000461187 ARMT1Q9H993 441 aa17.78■□□□□ 0.44
SMPD4-216ENST00000461187 CWC22Q9HCG8 908 aaKnown RBP17.78■□□□□ 0.44
SMPD4-216ENST00000461187 PAG1Q9NWQ8 432 aa17.78■□□□□ 0.44
SMPD4-216ENST00000461187 PFASO15067 1338 aa17.77■□□□□ 0.44
SMPD4-216ENST00000461187 SLC15A5A6NIM6 579 aa17.77■□□□□ 0.44
SMPD4-216ENST00000461187 MPHOSPH10O00566 681 aaKnown RBP17.77■□□□□ 0.44
SMPD4-216ENST00000461187 GLRX3O76003 335 aaKnown RBP17.77■□□□□ 0.44
SMPD4-216ENST00000461187 ATP5JP18859 108 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms