RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 ANKRD1Q15327 319 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 ANO6Q4KMQ2 910 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 SYT10Q6XYQ8 523 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 ILDR2Q71H61 639 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 SP8Q8IXZ3 490 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 LCORLQ8N3X6 602 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 CCDC112Q8NEF3 446 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 SDR42E1Q8WUS8 393 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 AIDAQ96BJ3 306 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 ZNF396Q96N95 335 aaPredicted RBP9.7□□□□□ -0.86
HDAC9-219ENST00000461159 CBX8Q9HC52 389 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 CD209Q9NNX6 404 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 INCENPQ9NQS7 918 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.7□□□□□ -0.86
HDAC9-219ENST00000461159 SUN2Q9UH99 717 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 SLX4Q8IY92 1834 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 RGPD3A6NKT7 1758 aaPredicted RBP9.7□□□□□ -0.86
HDAC9-219ENST00000461159 RGPD4Q7Z3J3 1758 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 TPD52L2O43399 206 aaKnown RBP9.69□□□□□ -0.86
HDAC9-219ENST00000461159 ZRANB2O95218 330 aaKnown RBP eCLIP9.69□□□□□ -0.86
HDAC9-219ENST00000461159 FGAP02671 866 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 NAP1L1P55209 391 aaKnown RBP9.69□□□□□ -0.86
HDAC9-219ENST00000461159 CAMK4Q16566 473 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 ME3Q16798 604 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 RBM26Q5T8P6 1007 aaKnown RBP9.69□□□□□ -0.86
HDAC9-219ENST00000461159 TDRD7Q8NHU6 1098 aaKnown RBP9.69□□□□□ -0.86
HDAC9-219ENST00000461159 SPATA32Q96LK8 384 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 C16orf45Q96MC5 204 aaPredicted RBP9.69□□□□□ -0.86
HDAC9-219ENST00000461159 MAGEA9P43362 315 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 RHBDL3P58872 404 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 GTF2IP78347 998 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 MECOMQ03112 1051 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 ZSCAN25Q6NSZ9 544 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 APBB1IPQ7Z5R6 666 aaPredicted RBP9.69□□□□□ -0.86
HDAC9-219ENST00000461159 PLA2G4DQ86XP0 818 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 KCNV2Q8TDN2 545 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 ZC3H12CQ9C0D7 883 aaKnown RBP9.69□□□□□ -0.86
HDAC9-219ENST00000461159 CLSTN2Q9H4D0 955 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 DACT1Q9NYF0 836 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 PCDHGA4Q9Y5G9 962 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 SYNRGQ9UMZ2 1314 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 TRIM66O15016 1216 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 ATP2B4P23634 1241 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 RWDD2BP57060 319 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 EVX2Q03828 476 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 TPD52L1Q16890 204 aaPredicted RBP9.69□□□□□ -0.86
HDAC9-219ENST00000461159 CCDC181Q5TID7 509 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 KRBA2Q6ZNG9 492 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 ZNF804AQ7Z570 1209 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 CKAP2LQ8IYA6 745 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 FAXDC2Q96IV6 333 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 ARPC5LQ9BPX5 153 aa9.69□□□□□ -0.86
HDAC9-219ENST00000461159 TMX4Q9H1E5 349 aaPredicted RBP9.69□□□□□ -0.86
HDAC9-219ENST00000461159 AATFQ9NY61 560 aaKnown RBP eCLIP9.69□□□□□ -0.86
HDAC9-219ENST00000461159 G3V3G9 751 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 PES1O00541 588 aaKnown RBP9.68□□□□□ -0.86
HDAC9-219ENST00000461159 NEMFO60524 1076 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 ZFYP08048 801 aaPredicted RBP9.68□□□□□ -0.86
HDAC9-219ENST00000461159 KCNA3P22001 575 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 CDC25BP30305 580 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 FOXD4Q12950 439 aaPredicted RBP9.68□□□□□ -0.86
HDAC9-219ENST00000461159 BMS1Q14692 1282 aaKnown RBP9.68□□□□□ -0.86
HDAC9-219ENST00000461159 DCAF8Q5TAQ9 597 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 RNF20Q5VTR2 975 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 RBM43Q6ZSC3 357 aaKnown RBP9.68□□□□□ -0.86
HDAC9-219ENST00000461159 CDC37L1Q7L3B6 337 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 SRLQ86TD4 932 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 FERMT3Q86UX7 667 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 FMNL3Q8IVF7 1028 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 NECAB1Q8N987 351 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 CLIP2Q9UDT6 1046 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 CHD4Q14839 1912 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 MYH13Q9UKX3 1938 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 NRXN2Q9P2S2 1712 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 TESPA1A2RU30 521 aaPredicted RBP9.68□□□□□ -0.86
HDAC9-219ENST00000461159 NAT1P18440 290 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 ZNF165P49910 485 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 ST3GAL1Q11201 340 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 LRMPQ12912 555 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 UBE3CQ15386 1083 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 AOC3Q16853 763 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 NAA16Q6N069 864 aaPredicted RBP9.68□□□□□ -0.86
HDAC9-219ENST00000461159 CCDC26Q8TAB7 109 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 NSUN4Q96CB9 384 aaKnown RBP9.68□□□□□ -0.86
HDAC9-219ENST00000461159 STRBPQ96SI9 672 aaKnown RBP9.68□□□□□ -0.86
HDAC9-219ENST00000461159 SH3GL3Q99963 347 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 MMTAG2Q9BU76 263 aaKnown RBP9.68□□□□□ -0.86
HDAC9-219ENST00000461159 VEZTQ9HBM0 779 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 TPCN1Q9ULQ1 816 aa9.68□□□□□ -0.86
HDAC9-219ENST00000461159 DOCK2Q92608 1830 aa9.67□□□□□ -0.86
HDAC9-219ENST00000461159 PPFIA3O75145 1194 aa9.67□□□□□ -0.86
HDAC9-219ENST00000461159 PDCD2Q16342 344 aaPredicted RBP9.67□□□□□ -0.86
HDAC9-219ENST00000461159 LRRFIP1Q32MZ4 808 aaKnown RBP9.67□□□□□ -0.86
HDAC9-219ENST00000461159 MFSD14BQ5SR56 506 aa9.67□□□□□ -0.86
HDAC9-219ENST00000461159 TTC19Q6DKK2 380 aaPredicted RBP9.67□□□□□ -0.86
HDAC9-219ENST00000461159 BLOC1S2Q6QNY1 142 aa9.67□□□□□ -0.86
HDAC9-219ENST00000461159 MMS22LQ6ZRQ5 1243 aa9.67□□□□□ -0.86
HDAC9-219ENST00000461159 BICD2Q8TD16 824 aa9.67□□□□□ -0.86
HDAC9-219ENST00000461159 SLC16A10Q8TF71 515 aa9.67□□□□□ -0.86
HDAC9-219ENST00000461159 LZTS2Q9BRK4 669 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms