RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 NAA16Q6N069 864 aaPredicted RBP21.15■□□□□ 0.98
TOP3A-202ENST00000461127 MAPKAPK5Q8IW41 473 aa21.15■□□□□ 0.98
TOP3A-202ENST00000461127 DNAJC18Q9H819 358 aa21.15■□□□□ 0.98
TOP3A-202ENST00000461127 SIPA1L1O43166 1804 aa21.15■□□□□ 0.98
TOP3A-202ENST00000461127 FLT1P17948 1338 aa21.14■□□□□ 0.97
TOP3A-202ENST00000461127 ZNF521Q96K83 1311 aa21.14■□□□□ 0.97
TOP3A-202ENST00000461127 E9PSI1 815 aa21.14■□□□□ 0.97
TOP3A-202ENST00000461127 ARID4AP29374 1257 aaPredicted RBP21.14■□□□□ 0.97
TOP3A-202ENST00000461127 CYP2C19P33261 490 aa21.14■□□□□ 0.97
TOP3A-202ENST00000461127 GJC2Q5T442 439 aaPredicted RBP21.14■□□□□ 0.97
TOP3A-202ENST00000461127 POTEEQ6S8J3 1075 aa21.14■□□□□ 0.97
TOP3A-202ENST00000461127 SLC39A5Q6ZMH5 540 aa21.14■□□□□ 0.97
TOP3A-202ENST00000461127 BADQ92934 168 aa21.14■□□□□ 0.97
TOP3A-202ENST00000461127 TTYH1Q9H313 450 aaPredicted RBP21.14■□□□□ 0.97
TOP3A-202ENST00000461127 TMEM265A0A087WTH1 108 aa21.13■□□□□ 0.97
TOP3A-202ENST00000461127 SRGAP3O43295 1099 aa21.13■□□□□ 0.97
TOP3A-202ENST00000461127 UQCRFS1P1P0C7P4 283 aa21.13■□□□□ 0.97
TOP3A-202ENST00000461127 USP14P54578 494 aa21.13■□□□□ 0.97
TOP3A-202ENST00000461127 GRB14Q14449 540 aa21.13■□□□□ 0.97
TOP3A-202ENST00000461127 SHROOM1Q2M3G4 852 aaPredicted RBP21.13■□□□□ 0.97
TOP3A-202ENST00000461127 C12orf42Q96LP6 360 aa21.13■□□□□ 0.97
TOP3A-202ENST00000461127 PALD1Q9ULE6 856 aa21.13■□□□□ 0.97
TOP3A-202ENST00000461127 RLFQ13129 1914 aa21.12■□□□□ 0.97
TOP3A-202ENST00000461127 CNMDO75829 334 aa21.12■□□□□ 0.97
TOP3A-202ENST00000461127 PPP4CP60510 307 aa21.12■□□□□ 0.97
TOP3A-202ENST00000461127 ZYXQ15942 572 aaKnown RBP21.12■□□□□ 0.97
TOP3A-202ENST00000461127 CDH23Q9H251 3354 aa21.12■□□□□ 0.97
TOP3A-202ENST00000461127 GH2P01242 217 aa21.11■□□□□ 0.97
TOP3A-202ENST00000461127 MYCNP04198 464 aaPredicted RBP21.11■□□□□ 0.97
TOP3A-202ENST00000461127 CYBAP13498 195 aa21.11■□□□□ 0.97
TOP3A-202ENST00000461127 MCAMP43121 646 aa21.11■□□□□ 0.97
TOP3A-202ENST00000461127 TJAP1Q5JTD0 557 aa21.11■□□□□ 0.97
TOP3A-202ENST00000461127 CATSPERGQ6ZRH7 1159 aa21.11■□□□□ 0.97
TOP3A-202ENST00000461127 DPP9Q86TI2 863 aa21.11■□□□□ 0.97
TOP3A-202ENST00000461127 NPLOC4Q8TAT6 608 aa21.11■□□□□ 0.97
TOP3A-202ENST00000461127 API5Q9BZZ5 524 aaKnown RBP21.11■□□□□ 0.97
TOP3A-202ENST00000461127 COL9A1P20849 921 aa21.1■□□□□ 0.97
TOP3A-202ENST00000461127 TRIM60Q495X7 471 aa21.1■□□□□ 0.97
TOP3A-202ENST00000461127 LBX2Q6XYB7 198 aa21.1■□□□□ 0.97
TOP3A-202ENST00000461127 TRPV1Q8NER1 839 aa21.1■□□□□ 0.97
TOP3A-202ENST00000461127 MEIS3Q99687 375 aa21.1■□□□□ 0.97
TOP3A-202ENST00000461127 PDLIM7Q9NR12 457 aa21.1■□□□□ 0.97
TOP3A-202ENST00000461127 SAP30BPQ9UHR5 308 aaKnown RBP21.1■□□□□ 0.97
TOP3A-202ENST00000461127 SNX17Q15036 470 aa21.09■□□□□ 0.97
TOP3A-202ENST00000461127 OLFML2BQ68BL8 750 aa21.09■□□□□ 0.97
TOP3A-202ENST00000461127 RNPC3Q96LT9 517 aaKnown RBP21.09■□□□□ 0.97
TOP3A-202ENST00000461127 TNFRSF10AO00220 468 aa21.08■□□□□ 0.97
TOP3A-202ENST00000461127 SEPT4O43236 478 aa21.08■□□□□ 0.97
TOP3A-202ENST00000461127 STRNO43815 780 aa21.08■□□□□ 0.97
TOP3A-202ENST00000461127 GNAI3P08754 354 aa21.08■□□□□ 0.97
TOP3A-202ENST00000461127 VCAM1P19320 739 aa21.08■□□□□ 0.97
TOP3A-202ENST00000461127 RAB3GAP1Q15042 981 aa21.08■□□□□ 0.97
TOP3A-202ENST00000461127 CDK5RAP2Q96SN8 1893 aa21.08■□□□□ 0.97
TOP3A-202ENST00000461127 KIAA1683Q9H0B3 1180 aa21.08■□□□□ 0.97
TOP3A-202ENST00000461127 SLC5A4Q9NY91 659 aa21.08■□□□□ 0.97
TOP3A-202ENST00000461127 BTBD7Q9P203 1132 aa21.08■□□□□ 0.97
TOP3A-202ENST00000461127 FOCADQ5VW36 1801 aa21.08■□□□□ 0.96
TOP3A-202ENST00000461127 ADCYAP1R1P41586 468 aa21.07■□□□□ 0.96
TOP3A-202ENST00000461127 MTX1Q13505 466 aa21.07■□□□□ 0.96
TOP3A-202ENST00000461127 C1orf53Q5VUE5 145 aa21.07■□□□□ 0.96
TOP3A-202ENST00000461127 ANO1Q5XXA6 986 aa21.07■□□□□ 0.96
TOP3A-202ENST00000461127 NOB1Q9ULX3 412 aaKnown RBP21.07■□□□□ 0.96
TOP3A-202ENST00000461127 TACC3Q9Y6A5 838 aa21.07■□□□□ 0.96
TOP3A-202ENST00000461127 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.07■□□□□ 0.96
TOP3A-202ENST00000461127 IGSF3O75054 1194 aa21.06■□□□□ 0.96
TOP3A-202ENST00000461127 ADORA2AP29274 412 aa21.06■□□□□ 0.96
TOP3A-202ENST00000461127 G3BP1Q13283 466 aaKnown RBP eCLIP21.06■□□□□ 0.96
TOP3A-202ENST00000461127 TTC39AQ5SRH9 613 aa21.06■□□□□ 0.96
TOP3A-202ENST00000461127 SNRKQ9NRH2 765 aa21.06■□□□□ 0.96
TOP3A-202ENST00000461127 TRIM43BA6NCK2 446 aa21.05■□□□□ 0.96
TOP3A-202ENST00000461127 SPDYE16A6NNV3 312 aaPredicted RBP21.05■□□□□ 0.96
TOP3A-202ENST00000461127 IGHA2P01877 340 aa21.05■□□□□ 0.96
TOP3A-202ENST00000461127 CCDC158Q5M9N0 1113 aa21.05■□□□□ 0.96
TOP3A-202ENST00000461127 TATDN1Q6P1N9 297 aa21.05■□□□□ 0.96
TOP3A-202ENST00000461127 SH3RF1Q7Z6J0 888 aa21.05■□□□□ 0.96
TOP3A-202ENST00000461127 FERMT2Q96AC1 680 aa21.05■□□□□ 0.96
TOP3A-202ENST00000461127 TRIM43Q96BQ3 446 aaPredicted RBP21.05■□□□□ 0.96
TOP3A-202ENST00000461127 RPAP3Q9H6T3 665 aaPredicted RBP21.05■□□□□ 0.96
TOP3A-202ENST00000461127 CABP5Q9NP86 173 aa21.05■□□□□ 0.96
TOP3A-202ENST00000461127 SERPINB13Q9UIV8 391 aa21.05■□□□□ 0.96
TOP3A-202ENST00000461127 MUC3AQ02505 3323 aa21.04■□□□□ 0.96
TOP3A-202ENST00000461127 TLE2Q04725 743 aa21.04■□□□□ 0.96
TOP3A-202ENST00000461127 SLFN5Q08AF3 891 aa21.04■□□□□ 0.96
TOP3A-202ENST00000461127 ABCB5Q2M3G0 1257 aa21.04■□□□□ 0.96
TOP3A-202ENST00000461127 CERKLQ49MI3 558 aaPredicted RBP21.04■□□□□ 0.96
TOP3A-202ENST00000461127 ADGRA1Q86SQ6 560 aa21.04■□□□□ 0.96
TOP3A-202ENST00000461127 CERS3Q8IU89 383 aa21.04■□□□□ 0.96
TOP3A-202ENST00000461127 YTHDC1Q96MU7 727 aaKnown RBP21.04■□□□□ 0.96
TOP3A-202ENST00000461127 CLTBP09497 229 aa21.03■□□□□ 0.96
TOP3A-202ENST00000461127 USP5P45974 858 aa21.03■□□□□ 0.96
TOP3A-202ENST00000461127 LRRC41Q15345 812 aa21.03■□□□□ 0.96
TOP3A-202ENST00000461127 EHD4Q9H223 541 aa21.03■□□□□ 0.96
TOP3A-202ENST00000461127 HOXC10Q9NYD6 342 aa21.03■□□□□ 0.96
TOP3A-202ENST00000461127 ZNF236Q9UL36 1845 aa21.03■□□□□ 0.96
TOP3A-202ENST00000461127 MYH1P12882 1939 aa21.02■□□□□ 0.96
TOP3A-202ENST00000461127 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.02■□□□□ 0.96
TOP3A-202ENST00000461127 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.02■□□□□ 0.96
TOP3A-202ENST00000461127 RAG1P15918 1043 aa21.02■□□□□ 0.96
TOP3A-202ENST00000461127 GRIN2CQ14957 1233 aa21.02■□□□□ 0.96
TOP3A-202ENST00000461127 SHCBP1Q8NEM2 672 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms