RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.34■□□□□ 0.21
CHRD-209ENST00000461120 RBM27Q9P2N5 1060 aaKnown RBP16.34■□□□□ 0.21
CHRD-209ENST00000461120 MYH8P13535 1937 aa16.34■□□□□ 0.21
CHRD-209ENST00000461120 ATAD5Q96QE3 1844 aa16.33■□□□□ 0.21
CHRD-209ENST00000461120 SLC27A2O14975 620 aa16.33■□□□□ 0.2
CHRD-209ENST00000461120 EPB41L2O43491 1005 aaKnown RBP16.33■□□□□ 0.2
CHRD-209ENST00000461120 GH2P01242 217 aa16.33■□□□□ 0.2
CHRD-209ENST00000461120 ASNSP08243 561 aa16.33■□□□□ 0.2
CHRD-209ENST00000461120 PCP11498 1178 aaKnown RBP16.33■□□□□ 0.2
CHRD-209ENST00000461120 AKR1B1P15121 316 aa16.33■□□□□ 0.2
CHRD-209ENST00000461120 CREB3L3Q68CJ9 461 aa16.33■□□□□ 0.2
CHRD-209ENST00000461120 MFSD6Q6ZSS7 791 aa16.33■□□□□ 0.2
CHRD-209ENST00000461120 USP26Q9BXU7 913 aa16.33■□□□□ 0.2
CHRD-209ENST00000461120 RNF41Q9H4P4 317 aaPredicted RBP16.33■□□□□ 0.2
CHRD-209ENST00000461120 PICK1Q9NRD5 415 aa16.33■□□□□ 0.2
CHRD-209ENST00000461120 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.33■□□□□ 0.2
CHRD-209ENST00000461120 ZBTB21Q9ULJ3 1066 aa16.33■□□□□ 0.2
CHRD-209ENST00000461120 TRIM17Q9Y577 477 aa16.33■□□□□ 0.2
CHRD-209ENST00000461120 TAF6LQ9Y6J9 622 aa16.33■□□□□ 0.2
CHRD-209ENST00000461120 BRCA2P51587 3418 aa16.32■□□□□ 0.2
CHRD-209ENST00000461120 SPDYE5A6NIY4 337 aa16.32■□□□□ 0.2
CHRD-209ENST00000461120 MPHOSPH10O00566 681 aaKnown RBP16.32■□□□□ 0.2
CHRD-209ENST00000461120 EIF5BO60841 1220 aaKnown RBP16.32■□□□□ 0.2
CHRD-209ENST00000461120 PTPRAP18433 802 aa16.32■□□□□ 0.2
CHRD-209ENST00000461120 NEDD4P46934 1319 aa16.32■□□□□ 0.2
CHRD-209ENST00000461120 ERO1BQ86YB8 467 aa16.32■□□□□ 0.2
CHRD-209ENST00000461120 RASAL3Q86YV0 1011 aa16.32■□□□□ 0.2
CHRD-209ENST00000461120 ZNF444Q8N0Y2 327 aaPredicted RBP16.32■□□□□ 0.2
CHRD-209ENST00000461120 CNKSR2Q8WXI2 1034 aa16.32■□□□□ 0.2
CHRD-209ENST00000461120 CABP5Q9NP86 173 aa16.32■□□□□ 0.2
CHRD-209ENST00000461120 TOMM22Q9NS69 142 aa16.32■□□□□ 0.2
CHRD-209ENST00000461120 HTTP42858 3142 aa16.31■□□□□ 0.2
CHRD-209ENST00000461120 SEC24BO95487 1268 aa16.31■□□□□ 0.2
CHRD-209ENST00000461120 GUCY1A2P33402 732 aa16.31■□□□□ 0.2
CHRD-209ENST00000461120 RNF20Q5VTR2 975 aa16.31■□□□□ 0.2
CHRD-209ENST00000461120 TMEM179Q6ZVK1 233 aa16.31■□□□□ 0.2
CHRD-209ENST00000461120 CCDC84Q86UT8 332 aaPredicted RBP16.31■□□□□ 0.2
CHRD-209ENST00000461120 WNK4Q96J92 1243 aa16.31■□□□□ 0.2
CHRD-209ENST00000461120 USP17L5A8MUK1 530 aa16.3■□□□□ 0.2
CHRD-209ENST00000461120 RANBP6O60518 1105 aaKnown RBP16.3■□□□□ 0.2
CHRD-209ENST00000461120 HSPA4P34932 840 aa16.3■□□□□ 0.2
CHRD-209ENST00000461120 GJA5P36382 358 aa16.3■□□□□ 0.2
CHRD-209ENST00000461120 TFAP4Q01664 338 aa16.3■□□□□ 0.2
CHRD-209ENST00000461120 PPATQ06203 517 aa16.3■□□□□ 0.2
CHRD-209ENST00000461120 SEPT2Q15019 361 aa16.3■□□□□ 0.2
CHRD-209ENST00000461120 FAM47AQ5JRC9 791 aa16.3■□□□□ 0.2
CHRD-209ENST00000461120 RRP12Q5JTH9 1297 aaKnown RBP16.3■□□□□ 0.2
CHRD-209ENST00000461120 SPRYD7Q5W111 196 aa16.3■□□□□ 0.2
CHRD-209ENST00000461120 STOX1Q6ZVD7 989 aa16.3■□□□□ 0.2
CHRD-209ENST00000461120 NEDD1Q8NHV4 660 aa16.3■□□□□ 0.2
CHRD-209ENST00000461120 NKX2-3Q8TAU0 364 aa16.3■□□□□ 0.2
CHRD-209ENST00000461120 KCNB2Q92953 911 aa16.3■□□□□ 0.2
CHRD-209ENST00000461120 OPTNQ96CV9 577 aa16.3■□□□□ 0.2
CHRD-209ENST00000461120 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.3■□□□□ 0.2
CHRD-209ENST00000461120 ZHX2Q9Y6X8 837 aa16.3■□□□□ 0.2
CHRD-209ENST00000461120 GREB1LQ9C091 1923 aaPredicted RBP16.29■□□□□ 0.2
CHRD-209ENST00000461120 PLIN4Q96Q06 1357 aa16.29■□□□□ 0.2
CHRD-209ENST00000461120 TSPY2A6NKD2 308 aa16.29■□□□□ 0.2
CHRD-209ENST00000461120 E7EWF7 191 aa16.29■□□□□ 0.2
CHRD-209ENST00000461120 TSPY3P0CV98 308 aa16.29■□□□□ 0.2
CHRD-209ENST00000461120 TSPY8P0CW00 308 aa16.29■□□□□ 0.2
CHRD-209ENST00000461120 PPIL2Q13356 520 aa16.29■□□□□ 0.2
CHRD-209ENST00000461120 RAB3GAP1Q15042 981 aa16.29■□□□□ 0.2
CHRD-209ENST00000461120 RASEFQ8IZ41 740 aa16.29■□□□□ 0.2
CHRD-209ENST00000461120 ESR2Q92731 530 aa16.29■□□□□ 0.2
CHRD-209ENST00000461120 KRT23Q9C075 422 aa16.29■□□□□ 0.2
CHRD-209ENST00000461120 CNNM2Q9H8M5 875 aa16.29■□□□□ 0.2
CHRD-209ENST00000461120 PHIPQ8WWQ0 1821 aa16.29■□□□□ 0.2
CHRD-209ENST00000461120 IGKV6D-41A0A0C4DH26 115 aa16.28■□□□□ 0.2
CHRD-209ENST00000461120 B4E1Z4 1266 aa16.28■□□□□ 0.2
CHRD-209ENST00000461120 ZBTB48P10074 688 aaPredicted RBP16.28■□□□□ 0.2
CHRD-209ENST00000461120 ZKSCAN1P17029 563 aaPredicted RBP16.28■□□□□ 0.2
CHRD-209ENST00000461120 TM4SF4P48230 202 aa16.28■□□□□ 0.2
CHRD-209ENST00000461120 NT5C2P49902 561 aa16.28■□□□□ 0.2
CHRD-209ENST00000461120 SREBF2Q12772 1141 aa16.28■□□□□ 0.2
CHRD-209ENST00000461120 TSGA10IPQ3SY00 556 aa16.28■□□□□ 0.2
CHRD-209ENST00000461120 CLEC10AQ8IUN9 316 aa16.28■□□□□ 0.2
CHRD-209ENST00000461120 WDR18Q9BV38 432 aa16.28■□□□□ 0.2
CHRD-209ENST00000461120 TBC1D2Q9BYX2 928 aa16.28■□□□□ 0.2
CHRD-209ENST00000461120 KANSL2Q9H9L4 492 aa16.28■□□□□ 0.2
CHRD-209ENST00000461120 AS3MTQ9HBK9 375 aa16.28■□□□□ 0.2
CHRD-209ENST00000461120 AFG3L2Q9Y4W6 797 aa16.28■□□□□ 0.2
CHRD-209ENST00000461120 IRF6O14896 467 aa16.27■□□□□ 0.2
CHRD-209ENST00000461120 KDM4AO75164 1064 aa16.27■□□□□ 0.2
CHRD-209ENST00000461120 TRDNQ13061 729 aa16.27■□□□□ 0.2
CHRD-209ENST00000461120 MKRN3Q13064 507 aaKnown RBP16.27■□□□□ 0.2
CHRD-209ENST00000461120 ZNF280CQ8ND82 737 aa16.27■□□□□ 0.2
CHRD-209ENST00000461120 NCOA7Q8NI08 942 aa16.27■□□□□ 0.2
CHRD-209ENST00000461120 DPF3Q92784 378 aa16.27■□□□□ 0.2
CHRD-209ENST00000461120 ARMC5Q96C12 935 aa16.27■□□□□ 0.2
CHRD-209ENST00000461120 CFHR5Q9BXR6 569 aa16.27■□□□□ 0.2
CHRD-209ENST00000461120 PRDM6Q9NQX0 595 aa16.27■□□□□ 0.2
CHRD-209ENST00000461120 KCNH4Q9UQ05 1017 aa16.27■□□□□ 0.2
CHRD-209ENST00000461120 SNX14Q9Y5W7 946 aa16.27■□□□□ 0.2
CHRD-209ENST00000461120 A0A1W2PPC1 479 aa16.26■□□□□ 0.19
CHRD-209ENST00000461120 CXCL11O14625 94 aa16.26■□□□□ 0.19
CHRD-209ENST00000461120 ALDH1A1P00352 501 aa16.26■□□□□ 0.19
CHRD-209ENST00000461120 MCCP23508 829 aa16.26■□□□□ 0.19
CHRD-209ENST00000461120 ICA1Q05084 483 aa16.26■□□□□ 0.19
CHRD-209ENST00000461120 SPP2Q13103 211 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms