RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 FZD1Q9UP38 647 aa8.88□□□□□ -0.99
RTN4-212ENST00000461004 GAKO14976 1311 aa8.87□□□□□ -0.99
RTN4-212ENST00000461004 RAD21O60216 631 aa8.87□□□□□ -0.99
RTN4-212ENST00000461004 CELF2O95319 508 aaKnown RBP8.87□□□□□ -0.99
RTN4-212ENST00000461004 SLURP2P0DP57 97 aa8.87□□□□□ -0.99
RTN4-212ENST00000461004 GGCXP38435 758 aa8.87□□□□□ -0.99
RTN4-212ENST00000461004 BTDP43251 543 aa8.87□□□□□ -0.99
RTN4-212ENST00000461004 DYNLL1P63167 89 aaKnown RBP8.87□□□□□ -0.99
RTN4-212ENST00000461004 NFIAQ12857 509 aa8.87□□□□□ -0.99
RTN4-212ENST00000461004 SPTY2D1Q68D10 685 aaPredicted RBP8.87□□□□□ -0.99
RTN4-212ENST00000461004 LIAT1Q6ZQX7 453 aa8.87□□□□□ -0.99
RTN4-212ENST00000461004 CHD1LQ86WJ1 897 aa8.87□□□□□ -0.99
RTN4-212ENST00000461004 ZGPATQ8N5A5 531 aaKnown RBP8.87□□□□□ -0.99
RTN4-212ENST00000461004 MAGEB6Q8N7X4 407 aa8.87□□□□□ -0.99
RTN4-212ENST00000461004 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.87□□□□□ -0.99
RTN4-212ENST00000461004 BAP1Q92560 729 aa8.87□□□□□ -0.99
RTN4-212ENST00000461004 DEFB129Q9H1M3 183 aa8.87□□□□□ -0.99
RTN4-212ENST00000461004 USP40Q9NVE5 1235 aa8.87□□□□□ -0.99
RTN4-212ENST00000461004 PAG1Q9NWQ8 432 aa8.87□□□□□ -0.99
RTN4-212ENST00000461004 CNTNAP1P78357 1384 aa8.86□□□□□ -0.99
RTN4-212ENST00000461004 MROH7-TTC4A0A0A0MT08 1334 aa8.86□□□□□ -0.99
RTN4-212ENST00000461004 MAST3O60307 1309 aa8.86□□□□□ -0.99
RTN4-212ENST00000461004 PITPNM2Q9BZ72 1349 aa8.86□□□□□ -0.99
RTN4-212ENST00000461004 GPR75-ASB3A0A0A6YYF3 556 aa8.86□□□□□ -0.99
RTN4-212ENST00000461004 MX1P20591 662 aa8.86□□□□□ -0.99
RTN4-212ENST00000461004 CYP7A1P22680 504 aa8.86□□□□□ -0.99
RTN4-212ENST00000461004 MMP14P50281 582 aa8.86□□□□□ -0.99
RTN4-212ENST00000461004 PDE1AP54750 535 aa8.86□□□□□ -0.99
RTN4-212ENST00000461004 RHBDL3P58872 404 aa8.86□□□□□ -0.99
RTN4-212ENST00000461004 TCP10Q12799 353 aa8.86□□□□□ -0.99
RTN4-212ENST00000461004 PRKG1Q13976 671 aa8.86□□□□□ -0.99
RTN4-212ENST00000461004 RASA3Q14644 834 aa8.86□□□□□ -0.99
RTN4-212ENST00000461004 NBPF12Q5TAG4 269 aaPredicted RBP8.86□□□□□ -0.99
RTN4-212ENST00000461004 NAA16Q6N069 864 aaPredicted RBP8.86□□□□□ -0.99
RTN4-212ENST00000461004 PLEKHM2Q8IWE5 1019 aa8.86□□□□□ -0.99
RTN4-212ENST00000461004 MIGA1Q8NAN2 632 aa8.86□□□□□ -0.99
RTN4-212ENST00000461004 TMEM39BQ9GZU3 492 aa8.86□□□□□ -0.99
RTN4-212ENST00000461004 DDX4Q9NQI0 724 aaKnown RBP8.86□□□□□ -0.99
RTN4-212ENST00000461004 MYH2Q9UKX2 1941 aa8.86□□□□□ -0.99
RTN4-212ENST00000461004 TCRBV5S4A2TA0A5A2 114 aa8.85□□□□□ -0.99
RTN4-212ENST00000461004 POM121CA8CG34 1229 aa8.85□□□□□ -0.99
RTN4-212ENST00000461004 MYO1BO43795 1136 aa8.85□□□□□ -0.99
RTN4-212ENST00000461004 WDHD1O75717 1129 aaPredicted RBP8.85□□□□□ -0.99
RTN4-212ENST00000461004 PDE6AP16499 860 aa8.85□□□□□ -0.99
RTN4-212ENST00000461004 LINC01559Q495D7 138 aa8.85□□□□□ -0.99
RTN4-212ENST00000461004 SLC9C2Q5TAH2 1124 aa8.85□□□□□ -0.99
RTN4-212ENST00000461004 SH3BP5LQ7L8J4 393 aa8.85□□□□□ -0.99
RTN4-212ENST00000461004 APOBEC3FQ8IUX4 373 aaKnown RBP8.85□□□□□ -0.99
RTN4-212ENST00000461004 SH3RF3Q8TEJ3 882 aaPredicted RBP8.85□□□□□ -0.99
RTN4-212ENST00000461004 TEPSINQ96N21 525 aa8.85□□□□□ -0.99
RTN4-212ENST00000461004 AATFQ9NY61 560 aaKnown RBP eCLIP8.85□□□□□ -0.99
RTN4-212ENST00000461004 STAP2Q9UGK3 403 aa8.85□□□□□ -0.99
RTN4-212ENST00000461004 TTC41PQ6P2S7 1318 aa8.84□□□□□ -0.99
RTN4-212ENST00000461004 ZNF532Q9HCE3 1301 aa8.84□□□□□ -0.99
RTN4-212ENST00000461004 SSC5DA1L4H1 1573 aa8.84□□□□□ -0.99
RTN4-212ENST00000461004 TMEM88BA6NKF7 163 aa8.84□□□□□ -0.99
RTN4-212ENST00000461004 UBE2Q2LH0YL09 131 aa8.84□□□□□ -0.99
RTN4-212ENST00000461004 FBXO45P0C2W1 286 aa8.84□□□□□ -0.99
RTN4-212ENST00000461004 ADD2P35612 726 aa8.84□□□□□ -0.99
RTN4-212ENST00000461004 GSTO1P78417 241 aa8.84□□□□□ -0.99
RTN4-212ENST00000461004 SKOR1P84550 965 aa8.84□□□□□ -0.99
RTN4-212ENST00000461004 VAC14Q08AM6 782 aa8.84□□□□□ -0.99
RTN4-212ENST00000461004 MAP3K12Q12852 859 aa8.84□□□□□ -0.99
RTN4-212ENST00000461004 TRIM32Q13049 653 aa8.84□□□□□ -0.99
RTN4-212ENST00000461004 PICALMQ13492 652 aa8.84□□□□□ -0.99
RTN4-212ENST00000461004 MKRN1Q9UHC7 482 aaKnown RBP8.84□□□□□ -0.99
RTN4-212ENST00000461004 GLRX3O76003 335 aaKnown RBP8.83□□□□□ -1
RTN4-212ENST00000461004 NEFLP07196 543 aa8.83□□□□□ -1
RTN4-212ENST00000461004 LDHCP07864 332 aa8.83□□□□□ -1
RTN4-212ENST00000461004 RGS3P49796 1198 aa8.83□□□□□ -1
RTN4-212ENST00000461004 SH3BP2P78314 561 aa8.83□□□□□ -1
RTN4-212ENST00000461004 TTF1Q15361 905 aaPredicted RBP8.83□□□□□ -1
RTN4-212ENST00000461004 C4orf48Q5BLP8 95 aa8.83□□□□□ -1
RTN4-212ENST00000461004 TEX11Q8IYF3 940 aa8.83□□□□□ -1
RTN4-212ENST00000461004 DNAJC5GQ8N7S2 189 aa8.83□□□□□ -1
RTN4-212ENST00000461004 FOXJ1Q92949 421 aa8.83□□□□□ -1
RTN4-212ENST00000461004 GPATCH3Q96I76 525 aa8.83□□□□□ -1
RTN4-212ENST00000461004 GBA2Q9HCG7 927 aaPredicted RBP8.83□□□□□ -1
RTN4-212ENST00000461004 PRM3Q9NNZ6 103 aa8.83□□□□□ -1
RTN4-212ENST00000461004 ABT1Q9ULW3 272 aaKnown RBP8.83□□□□□ -1
RTN4-212ENST00000461004 RFX7Q2KHR2 1363 aa8.83□□□□□ -1
RTN4-212ENST00000461004 DDTLA6NHG4 134 aaPredicted RBP8.82□□□□□ -1
RTN4-212ENST00000461004 ERC2O15083 957 aa8.82□□□□□ -1
RTN4-212ENST00000461004 PRKAB2O43741 272 aa8.82□□□□□ -1
RTN4-212ENST00000461004 USP2O75604 605 aaPredicted RBP8.82□□□□□ -1
RTN4-212ENST00000461004 SLC4A8Q2Y0W8 1093 aa8.82□□□□□ -1
RTN4-212ENST00000461004 MIGA2Q7L4E1 593 aa8.82□□□□□ -1
RTN4-212ENST00000461004 SAPCD2Q86UD0 394 aa8.82□□□□□ -1
RTN4-212ENST00000461004 MAPKAPK5Q8IW41 473 aa8.82□□□□□ -1
RTN4-212ENST00000461004 LCORLQ8N3X6 602 aa8.82□□□□□ -1
RTN4-212ENST00000461004 KBTBD3Q8NAB2 608 aa8.82□□□□□ -1
RTN4-212ENST00000461004 ZNF511Q8NB15 262 aa8.82□□□□□ -1
RTN4-212ENST00000461004 ADAMTS19Q8TE59 1207 aa8.82□□□□□ -1
RTN4-212ENST00000461004 TGFBRAP1Q8WUH2 860 aa8.82□□□□□ -1
RTN4-212ENST00000461004 FAM151AQ8WW52 585 aa8.82□□□□□ -1
RTN4-212ENST00000461004 OSBP2Q969R2 916 aa8.82□□□□□ -1
RTN4-212ENST00000461004 SEC62Q99442 399 aaKnown RBP8.82□□□□□ -1
RTN4-212ENST00000461004 RIOK1Q9BRS2 568 aaKnown RBP8.82□□□□□ -1
RTN4-212ENST00000461004 IDI2Q9BXS1 227 aa8.82□□□□□ -1
RTN4-212ENST00000461004 PUS7LQ9H0K6 701 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms