RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 NEDD4P46934 1319 aa16.61■□□□□ 0.25
HDLBP-229ENST00000460826 IGKV6D-41A0A0C4DH26 115 aa16.6■□□□□ 0.25
HDLBP-229ENST00000460826 A0A1W2PRG0 241 aa16.6■□□□□ 0.25
HDLBP-229ENST00000460826 CETPP11597 493 aa16.6■□□□□ 0.25
HDLBP-229ENST00000460826 HMGCS2P54868 508 aa16.6■□□□□ 0.25
HDLBP-229ENST00000460826 TFAP4Q01664 338 aa16.6■□□□□ 0.25
HDLBP-229ENST00000460826 SREBF2Q12772 1141 aa16.6■□□□□ 0.25
HDLBP-229ENST00000460826 MTMR2Q13614 643 aa16.6■□□□□ 0.25
HDLBP-229ENST00000460826 TBC1D2Q9BYX2 928 aa16.6■□□□□ 0.25
HDLBP-229ENST00000460826 TOMM22Q9NS69 142 aa16.6■□□□□ 0.25
HDLBP-229ENST00000460826 PLIN4Q96Q06 1357 aa16.6■□□□□ 0.25
HDLBP-229ENST00000460826 BTBD19C9JJ37 291 aa16.59■□□□□ 0.25
HDLBP-229ENST00000460826 RANBP6O60518 1105 aaKnown RBP16.59■□□□□ 0.25
HDLBP-229ENST00000460826 BACE1P56817 501 aa16.59■□□□□ 0.25
HDLBP-229ENST00000460826 MAP2K1Q02750 393 aaPredicted RBP16.59■□□□□ 0.25
HDLBP-229ENST00000460826 ICA1Q05084 483 aa16.59■□□□□ 0.25
HDLBP-229ENST00000460826 RRP12Q5JTH9 1297 aaKnown RBP16.59■□□□□ 0.25
HDLBP-229ENST00000460826 GADL1Q6ZQY3 521 aa16.59■□□□□ 0.25
HDLBP-229ENST00000460826 MFSD6Q6ZSS7 791 aa16.59■□□□□ 0.25
HDLBP-229ENST00000460826 IFNL1Q8IU54 200 aa16.59■□□□□ 0.25
HDLBP-229ENST00000460826 REM2Q8IYK8 340 aaPredicted RBP16.59■□□□□ 0.25
HDLBP-229ENST00000460826 FAM43AQ8N2R8 423 aa16.59■□□□□ 0.25
HDLBP-229ENST00000460826 NEDD1Q8NHV4 660 aa16.59■□□□□ 0.25
HDLBP-229ENST00000460826 USP17L10C9JJH3 530 aa16.58■□□□□ 0.24
HDLBP-229ENST00000460826 TSPY3P0CV98 308 aa16.58■□□□□ 0.24
HDLBP-229ENST00000460826 TSPY8P0CW00 308 aa16.58■□□□□ 0.24
HDLBP-229ENST00000460826 INHBEP58166 350 aa16.58■□□□□ 0.24
HDLBP-229ENST00000460826 ZYXQ15942 572 aaKnown RBP16.58■□□□□ 0.24
HDLBP-229ENST00000460826 SH3D19Q5HYK7 790 aa16.58■□□□□ 0.24
HDLBP-229ENST00000460826 GPAT2Q6NUI2 795 aa16.58■□□□□ 0.24
HDLBP-229ENST00000460826 STOX1Q6ZVD7 989 aa16.58■□□□□ 0.24
HDLBP-229ENST00000460826 RNF186Q9NXI6 227 aa16.58■□□□□ 0.24
HDLBP-229ENST00000460826 TSPY2A6NKD2 308 aa16.57■□□□□ 0.24
HDLBP-229ENST00000460826 SLC27A2O14975 620 aa16.57■□□□□ 0.24
HDLBP-229ENST00000460826 NMT2O60551 498 aa16.57■□□□□ 0.24
HDLBP-229ENST00000460826 EEF2P13639 858 aaKnown RBP16.57■□□□□ 0.24
HDLBP-229ENST00000460826 NECTIN1Q15223 517 aa16.57■□□□□ 0.24
HDLBP-229ENST00000460826 TREML2Q5T2D2 321 aa16.57■□□□□ 0.24
HDLBP-229ENST00000460826 CEP95Q96GE4 821 aa16.57■□□□□ 0.24
HDLBP-229ENST00000460826 FEZ1Q99689 392 aa16.57■□□□□ 0.24
HDLBP-229ENST00000460826 RNF41Q9H4P4 317 aaPredicted RBP16.57■□□□□ 0.24
HDLBP-229ENST00000460826 KANSL2Q9H9L4 492 aa16.57■□□□□ 0.24
HDLBP-229ENST00000460826 IL17RBQ9NRM6 502 aa16.57■□□□□ 0.24
HDLBP-229ENST00000460826 EMILIN3Q9NT22 766 aa16.57■□□□□ 0.24
HDLBP-229ENST00000460826 B4E1Z4 1266 aa16.56■□□□□ 0.24
HDLBP-229ENST00000460826 TRPA1O75762 1119 aa16.56■□□□□ 0.24
HDLBP-229ENST00000460826 HSPA1AP0DMV8 641 aaKnown RBP16.56■□□□□ 0.24
HDLBP-229ENST00000460826 HSPA1BP0DMV9 641 aaKnown RBP16.56■□□□□ 0.24
HDLBP-229ENST00000460826 PCP11498 1178 aaKnown RBP16.56■□□□□ 0.24
HDLBP-229ENST00000460826 ATP2B2Q01814 1243 aa16.56■□□□□ 0.24
HDLBP-229ENST00000460826 KIAA1755Q5JYT7 1200 aa16.56■□□□□ 0.24
HDLBP-229ENST00000460826 CREB3L3Q68CJ9 461 aa16.56■□□□□ 0.24
HDLBP-229ENST00000460826 ANKRD23Q86SG2 305 aa16.56■□□□□ 0.24
HDLBP-229ENST00000460826 KIAA1683Q9H0B3 1180 aa16.56■□□□□ 0.24
HDLBP-229ENST00000460826 R3HDMLQ9H3Y0 253 aa16.56■□□□□ 0.24
HDLBP-229ENST00000460826 MTMR4Q9NYA4 1195 aa16.56■□□□□ 0.24
HDLBP-229ENST00000460826 TSKSQ9UJT2 592 aa16.56■□□□□ 0.24
HDLBP-229ENST00000460826 PARP14Q460N5 1801 aa16.55■□□□□ 0.24
HDLBP-229ENST00000460826 C19orf81C9J6K1 198 aa16.55■□□□□ 0.24
HDLBP-229ENST00000460826 E7EWF7 191 aa16.55■□□□□ 0.24
HDLBP-229ENST00000460826 KDM4AO75164 1064 aa16.55■□□□□ 0.24
HDLBP-229ENST00000460826 USP17L2Q6R6M4 530 aa16.55■□□□□ 0.24
HDLBP-229ENST00000460826 FASTKD5Q7L8L6 764 aaKnown RBP16.55■□□□□ 0.24
HDLBP-229ENST00000460826 PROCA1Q8NCQ7 364 aaPredicted RBP16.55■□□□□ 0.24
HDLBP-229ENST00000460826 ARHGEF10LQ9HCE6 1279 aa16.55■□□□□ 0.24
HDLBP-229ENST00000460826 NYAP2Q9P242 653 aa16.55■□□□□ 0.24
HDLBP-229ENST00000460826 TMX2Q9Y320 296 aa16.55■□□□□ 0.24
HDLBP-229ENST00000460826 PDHXO00330 501 aa16.54■□□□□ 0.24
HDLBP-229ENST00000460826 FOXN1O15353 648 aa16.54■□□□□ 0.24
HDLBP-229ENST00000460826 COL9A3Q14050 684 aaPredicted RBP16.54■□□□□ 0.24
HDLBP-229ENST00000460826 ESR2Q92731 530 aa16.54■□□□□ 0.24
HDLBP-229ENST00000460826 C12orf42Q96LP6 360 aa16.54■□□□□ 0.24
HDLBP-229ENST00000460826 ZKSCAN3Q9BRR0 538 aa16.54■□□□□ 0.24
HDLBP-229ENST00000460826 TMOD4Q9NZQ9 345 aa16.54■□□□□ 0.24
HDLBP-229ENST00000460826 CLIP2Q9UDT6 1046 aa16.54■□□□□ 0.24
HDLBP-229ENST00000460826 AGTPBP1Q9UPW5 1226 aa16.54■□□□□ 0.24
HDLBP-229ENST00000460826 CASP8AP2Q9UKL3 1982 aa16.54■□□□□ 0.24
HDLBP-229ENST00000460826 RLFQ13129 1914 aa16.54■□□□□ 0.24
HDLBP-229ENST00000460826 REC8O95072 547 aa16.53■□□□□ 0.24
HDLBP-229ENST00000460826 TBC1D8O95759 1140 aa16.53■□□□□ 0.24
HDLBP-229ENST00000460826 USP14P54578 494 aa16.53■□□□□ 0.24
HDLBP-229ENST00000460826 TAF1CQ15572 869 aaPredicted RBP16.53■□□□□ 0.24
HDLBP-229ENST00000460826 OTUD7BQ6GQQ9 843 aa16.53■□□□□ 0.24
HDLBP-229ENST00000460826 CYB5R4Q7L1T6 521 aa16.53■□□□□ 0.24
HDLBP-229ENST00000460826 RASEFQ8IZ41 740 aa16.53■□□□□ 0.24
HDLBP-229ENST00000460826 BEGAINQ9BUH8 593 aa16.53■□□□□ 0.24
HDLBP-229ENST00000460826 KRT23Q9C075 422 aa16.53■□□□□ 0.24
HDLBP-229ENST00000460826 VCPKMTQ9H867 229 aa16.53■□□□□ 0.24
HDLBP-229ENST00000460826 CNNM2Q9H8M5 875 aa16.53■□□□□ 0.24
HDLBP-229ENST00000460826 TCP11L1Q9NUJ3 509 aa16.53■□□□□ 0.24
HDLBP-229ENST00000460826 ZSWIM5Q9P217 1185 aa16.53■□□□□ 0.24
HDLBP-229ENST00000460826 TTLL1O95922 423 aa16.52■□□□□ 0.24
HDLBP-229ENST00000460826 ALDH1A1P00352 501 aa16.52■□□□□ 0.24
HDLBP-229ENST00000460826 VCAM1P19320 739 aa16.52■□□□□ 0.24
HDLBP-229ENST00000460826 NOVP48745 357 aa16.52■□□□□ 0.24
HDLBP-229ENST00000460826 CRHR2Q13324 411 aa16.52■□□□□ 0.24
HDLBP-229ENST00000460826 C8orf34Q49A92 452 aa16.52■□□□□ 0.24
HDLBP-229ENST00000460826 RCSD1Q6JBY9 416 aa16.52■□□□□ 0.24
HDLBP-229ENST00000460826 SPICE1Q8N0Z3 855 aa16.52■□□□□ 0.24
HDLBP-229ENST00000460826 LRRC47Q8N1G4 583 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms