RNA–Protein interactions for RNA: ENST00000460801.5

PTPRN-210, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 2

Gene PTPRN, Length 2,239 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-210ENST00000460801 MFSD14BQ5SR56 506 aa16.03■□□□□ 0.16
PTPRN-210ENST00000460801 SARM1Q6SZW1 724 aa16.03■□□□□ 0.16
PTPRN-210ENST00000460801 ZNF830Q96NB3 372 aaPredicted RBP16.03■□□□□ 0.16
PTPRN-210ENST00000460801 TCP11L1Q9NUJ3 509 aa16.03■□□□□ 0.16
PTPRN-210ENST00000460801 ATP6V0A2Q9Y487 856 aa16.03■□□□□ 0.16
PTPRN-210ENST00000460801 GOLGA6L19H0YKK7 550 aa16.02■□□□□ 0.16
PTPRN-210ENST00000460801 CCDC178Q5BJE1 867 aa16.02■□□□□ 0.16
PTPRN-210ENST00000460801 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.02■□□□□ 0.16
PTPRN-210ENST00000460801 DHX40Q8IX18 779 aaKnown RBP16.02■□□□□ 0.16
PTPRN-210ENST00000460801 TRIM5Q9C035 493 aa16.02■□□□□ 0.16
PTPRN-210ENST00000460801 NAT10Q9H0A0 1025 aaKnown RBP16.02■□□□□ 0.16
PTPRN-210ENST00000460801 TTC12Q9H892 705 aaPredicted RBP16.02■□□□□ 0.16
PTPRN-210ENST00000460801 CABP5Q9NP86 173 aa16.02■□□□□ 0.16
PTPRN-210ENST00000460801 FBXO2Q9UK22 296 aaPredicted RBP16.02■□□□□ 0.16
PTPRN-210ENST00000460801 PCDHB6Q9Y5E3 794 aa16.02■□□□□ 0.16
PTPRN-210ENST00000460801 MORC2Q9Y6X9 1032 aaPredicted RBP16.02■□□□□ 0.16
PTPRN-210ENST00000460801 GAKO14976 1311 aa16.02■□□□□ 0.15
PTPRN-210ENST00000460801 GOLGA6L6A8MZA4 724 aa16.02■□□□□ 0.15
PTPRN-210ENST00000460801 SRGNP10124 158 aa16.02■□□□□ 0.15
PTPRN-210ENST00000460801 PLCG2P16885 1265 aa16.02■□□□□ 0.15
PTPRN-210ENST00000460801 KRT2P35908 639 aa16.02■□□□□ 0.15
PTPRN-210ENST00000460801 PLCD1P51178 756 aa16.02■□□□□ 0.15
PTPRN-210ENST00000460801 MAPKAPK5Q8IW41 473 aa16.02■□□□□ 0.15
PTPRN-210ENST00000460801 MKNK2Q9HBH9 465 aa16.02■□□□□ 0.15
PTPRN-210ENST00000460801 BAZ2BQ9UIF8 2168 aaKnown RBP16.01■□□□□ 0.15
PTPRN-210ENST00000460801 KIF5BP33176 963 aa16.01■□□□□ 0.15
PTPRN-210ENST00000460801 RHBDL3P58872 404 aa16.01■□□□□ 0.15
PTPRN-210ENST00000460801 NPY5RQ15761 445 aa16.01■□□□□ 0.15
PTPRN-210ENST00000460801 SLF2Q8IX21 1173 aa16.01■□□□□ 0.15
PTPRN-210ENST00000460801 SPC24Q8NBT2 197 aa16.01■□□□□ 0.15
PTPRN-210ENST00000460801 BPIFA3Q9BQP9 254 aa16.01■□□□□ 0.15
PTPRN-210ENST00000460801 KAT14Q9H8E8 782 aa16.01■□□□□ 0.15
PTPRN-210ENST00000460801 TUBE1Q9UJT0 475 aa16.01■□□□□ 0.15
PTPRN-210ENST00000460801 CEP131Q9UPN4 1083 aa16.01■□□□□ 0.15
PTPRN-210ENST00000460801 DDX60LQ5H9U9 1706 aaKnown RBP16.01■□□□□ 0.15
PTPRN-210ENST00000460801 KIAA2012Q0VF49 1180 aa16■□□□□ 0.15
PTPRN-210ENST00000460801 ZNF579Q8NAF0 562 aaKnown RBP16■□□□□ 0.15
PTPRN-210ENST00000460801 TNFRSF25Q93038 417 aa16■□□□□ 0.15
PTPRN-210ENST00000460801 KCNH3Q9ULD8 1083 aa16■□□□□ 0.15
PTPRN-210ENST00000460801 BECN2A8MW95 431 aa16■□□□□ 0.15
PTPRN-210ENST00000460801 APBA3O96018 575 aa16■□□□□ 0.15
PTPRN-210ENST00000460801 NPR1P16066 1061 aa16■□□□□ 0.15
PTPRN-210ENST00000460801 RASA1P20936 1047 aa16■□□□□ 0.15
PTPRN-210ENST00000460801 NLRP12P59046 1061 aa16■□□□□ 0.15
PTPRN-210ENST00000460801 ZRSR1Q15695 479 aaKnown RBP16■□□□□ 0.15
PTPRN-210ENST00000460801 DPCR1Q3MIW9 517 aa16■□□□□ 0.15
PTPRN-210ENST00000460801 ZNF772Q68DY9 489 aaPredicted RBP16■□□□□ 0.15
PTPRN-210ENST00000460801 ELOA2Q8IYF1 753 aaPredicted RBP16■□□□□ 0.15
PTPRN-210ENST00000460801 TEX11Q8IYF3 940 aa16■□□□□ 0.15
PTPRN-210ENST00000460801 ZNF444Q8N0Y2 327 aaPredicted RBP16■□□□□ 0.15
PTPRN-210ENST00000460801 PNMA1Q8ND90 353 aa16■□□□□ 0.15
PTPRN-210ENST00000460801 COA1Q9GZY4 146 aa16■□□□□ 0.15
PTPRN-210ENST00000460801 SAP30BPQ9UHR5 308 aaKnown RBP16■□□□□ 0.15
PTPRN-210ENST00000460801 SRPRBQ9Y5M8 271 aaKnown RBP16■□□□□ 0.15
PTPRN-210ENST00000460801 SCG2P13521 617 aa15.99■□□□□ 0.15
PTPRN-210ENST00000460801 CDC25BP30305 580 aa15.99■□□□□ 0.15
PTPRN-210ENST00000460801 PFKFB3Q16875 520 aaPredicted RBP15.99■□□□□ 0.15
PTPRN-210ENST00000460801 EARS2Q5JPH6 523 aaKnown RBP15.99■□□□□ 0.15
PTPRN-210ENST00000460801 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.99■□□□□ 0.15
PTPRN-210ENST00000460801 SLC44A5Q8NCS7 719 aa15.99■□□□□ 0.15
PTPRN-210ENST00000460801 FLAD1Q8NFF5 587 aa15.99■□□□□ 0.15
PTPRN-210ENST00000460801 ZNF287Q9HBT7 754 aa15.99■□□□□ 0.15
PTPRN-210ENST00000460801 USP17L3A6NCW0 530 aa15.99■□□□□ 0.15
PTPRN-210ENST00000460801 USP17L4A6NCW7 530 aa15.99■□□□□ 0.15
PTPRN-210ENST00000460801 FAM205CA6NFA0 338 aa15.99■□□□□ 0.15
PTPRN-210ENST00000460801 TSPY3P0CV98 308 aa15.99■□□□□ 0.15
PTPRN-210ENST00000460801 TSPY8P0CW00 308 aa15.99■□□□□ 0.15
PTPRN-210ENST00000460801 GRIN1Q05586 938 aa15.99■□□□□ 0.15
PTPRN-210ENST00000460801 LONRF3Q496Y0 759 aa15.99■□□□□ 0.15
PTPRN-210ENST00000460801 KRBA2Q6ZNG9 492 aa15.99■□□□□ 0.15
PTPRN-210ENST00000460801 C16orf86Q6ZW13 317 aa15.99■□□□□ 0.15
PTPRN-210ENST00000460801 USP17L1Q7RTZ2 530 aa15.99■□□□□ 0.15
PTPRN-210ENST00000460801 AOPEPQ8N6M6 819 aa15.99■□□□□ 0.15
PTPRN-210ENST00000460801 PIBF1Q8WXW3 757 aa15.99■□□□□ 0.15
PTPRN-210ENST00000460801 KCNF1Q9H3M0 494 aa15.99■□□□□ 0.15
PTPRN-210ENST00000460801 BRMS1Q9HCU9 246 aa15.99■□□□□ 0.15
PTPRN-210ENST00000460801 FLT1P17948 1338 aa15.99■□□□□ 0.15
PTPRN-210ENST00000460801 TRIM75PA6NK02 468 aa15.98■□□□□ 0.15
PTPRN-210ENST00000460801 GTF2IP78347 998 aa15.98■□□□□ 0.15
PTPRN-210ENST00000460801 GRM4Q14833 912 aa15.98■□□□□ 0.15
PTPRN-210ENST00000460801 SUGT1Q9Y2Z0 365 aa15.98■□□□□ 0.15
PTPRN-210ENST00000460801 ALDH1B1P30837 517 aa15.98■□□□□ 0.15
PTPRN-210ENST00000460801 CDK8P49336 464 aa15.98■□□□□ 0.15
PTPRN-210ENST00000460801 METTL16Q86W50 562 aaKnown RBP15.98■□□□□ 0.15
PTPRN-210ENST00000460801 FBXW7Q969H0 707 aa15.98■□□□□ 0.15
PTPRN-210ENST00000460801 MRFAP1L1Q96HT8 127 aa15.98■□□□□ 0.15
PTPRN-210ENST00000460801 FAM13BQ9NYF5 915 aa15.98■□□□□ 0.15
PTPRN-210ENST00000460801 MYH1P12882 1939 aa15.97■□□□□ 0.15
PTPRN-210ENST00000460801 BIN1O00499 593 aa15.97■□□□□ 0.15
PTPRN-210ENST00000460801 RIMBP2O15034 1052 aa15.97■□□□□ 0.15
PTPRN-210ENST00000460801 ATP2B1P20020 1258 aa15.97■□□□□ 0.15
PTPRN-210ENST00000460801 PDE6BP35913 854 aa15.97■□□□□ 0.15
PTPRN-210ENST00000460801 SPECC1Q5M775 1068 aa15.97■□□□□ 0.15
PTPRN-210ENST00000460801 DAGLAQ9Y4D2 1042 aa15.97■□□□□ 0.15
PTPRN-210ENST00000460801 FOCADQ5VW36 1801 aa15.97■□□□□ 0.15
PTPRN-210ENST00000460801 SNED1Q8TER0 1413 aa15.97■□□□□ 0.15
PTPRN-210ENST00000460801 MMP10P09238 476 aa15.96■□□□□ 0.15
PTPRN-210ENST00000460801 VEGFAP15692 232 aaPredicted RBP15.96■□□□□ 0.15
PTPRN-210ENST00000460801 GNAQP50148 359 aa15.96■□□□□ 0.15
PTPRN-210ENST00000460801 MDM2Q00987 491 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms