RNA–Protein interactions for RNA: ENST00000460781.1

CCDC93-204, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-204ENST00000460781 CLEC3AO75596 197 aa5.03□□□□□ -1.6
CCDC93-204ENST00000460781 H2AFB1P0C5Y9 115 aa5.03□□□□□ -1.6
CCDC93-204ENST00000460781 H2AFB2P0C5Z0 115 aa5.03□□□□□ -1.6
CCDC93-204ENST00000460781 BBS9Q3SYG4 887 aa5.03□□□□□ -1.6
CCDC93-204ENST00000460781 RNF43Q68DV7 783 aa5.03□□□□□ -1.6
CCDC93-204ENST00000460781 LETMD1Q6P1Q0 360 aa5.03□□□□□ -1.6
CCDC93-204ENST00000460781 ARMC5Q96C12 935 aa5.03□□□□□ -1.6
CCDC93-204ENST00000460781 ACSF2Q96CM8 615 aaPredicted RBP5.03□□□□□ -1.6
CCDC93-204ENST00000460781 COX4I2Q96KJ9 171 aa5.03□□□□□ -1.6
CCDC93-204ENST00000460781 SPOCK3Q9BQ16 436 aa5.03□□□□□ -1.6
CCDC93-204ENST00000460781 MKRN2Q9H000 416 aaKnown RBP5.03□□□□□ -1.6
CCDC93-204ENST00000460781 FBRSQ9HAH7 460 aa5.03□□□□□ -1.6
CCDC93-204ENST00000460781 KCNH3Q9ULD8 1083 aa5.03□□□□□ -1.6
CCDC93-204ENST00000460781 LEMD3Q9Y2U8 911 aa5.03□□□□□ -1.6
CCDC93-204ENST00000460781 PRR36Q9H6K5 1346 aa5.02□□□□□ -1.61
CCDC93-204ENST00000460781 SLC22A31A6NKX4 558 aa5.02□□□□□ -1.61
CCDC93-204ENST00000460781 WDR64B1ANS9 1081 aa5.02□□□□□ -1.61
CCDC93-204ENST00000460781 IGLV1-40P01703 118 aa5.02□□□□□ -1.61
CCDC93-204ENST00000460781 FSTP19883 344 aa5.02□□□□□ -1.61
CCDC93-204ENST00000460781 GUCY2CP25092 1073 aa5.02□□□□□ -1.61
CCDC93-204ENST00000460781 CAP2P40123 477 aa5.02□□□□□ -1.61
CCDC93-204ENST00000460781 CCNFP41002 786 aa5.02□□□□□ -1.61
CCDC93-204ENST00000460781 RING1Q06587 406 aa5.02□□□□□ -1.61
CCDC93-204ENST00000460781 NFIAQ12857 509 aa5.02□□□□□ -1.61
CCDC93-204ENST00000460781 CPSF6Q16630 551 aaKnown RBP eCLIP5.02□□□□□ -1.61
CCDC93-204ENST00000460781 LARP1BQ659C4 914 aaKnown RBP5.02□□□□□ -1.61
CCDC93-204ENST00000460781 ZAR1Q86SH2 424 aa5.02□□□□□ -1.61
CCDC93-204ENST00000460781 SLC51AQ86UW1 340 aa5.02□□□□□ -1.61
CCDC93-204ENST00000460781 MCF2L2Q86YR7 1114 aa5.02□□□□□ -1.61
CCDC93-204ENST00000460781 SLFN12Q8IYM2 578 aa5.02□□□□□ -1.61
CCDC93-204ENST00000460781 KIF2CQ99661 725 aa5.02□□□□□ -1.61
CCDC93-204ENST00000460781 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.02□□□□□ -1.61
CCDC93-204ENST00000460781 LRRC4CQ9HCJ2 640 aa5.02□□□□□ -1.61
CCDC93-204ENST00000460781 PRKAG3Q9UGI9 489 aa5.02□□□□□ -1.61
CCDC93-204ENST00000460781 CADPSQ9ULU8 1353 aa5.02□□□□□ -1.61
CCDC93-204ENST00000460781 ARHGEF11O15085 1522 aa5.02□□□□□ -1.61
CCDC93-204ENST00000460781 CEP164Q9UPV0 1460 aa5.01□□□□□ -1.61
CCDC93-204ENST00000460781 MEIS3P2A8K0S8 358 aa5.01□□□□□ -1.61
CCDC93-204ENST00000460781 CHURC1-FNTBB4DL54 471 aa5.01□□□□□ -1.61
CCDC93-204ENST00000460781 SMAD7O15105 426 aaKnown RBP5.01□□□□□ -1.61
CCDC93-204ENST00000460781 FGRP09769 529 aa5.01□□□□□ -1.61
CCDC93-204ENST00000460781 NME1P15531 152 aaKnown RBP5.01□□□□□ -1.61
CCDC93-204ENST00000460781 SLBPQ14493 270 aaKnown RBP eCLIP5.01□□□□□ -1.61
CCDC93-204ENST00000460781 FXNQ16595 210 aa5.01□□□□□ -1.61
CCDC93-204ENST00000460781 NKG7Q16617 165 aa5.01□□□□□ -1.61
CCDC93-204ENST00000460781 CLEC16AQ2KHT3 1053 aa5.01□□□□□ -1.61
CCDC93-204ENST00000460781 SFRP5Q5T4F7 317 aa5.01□□□□□ -1.61
CCDC93-204ENST00000460781 ANKS3Q6ZW76 656 aa5.01□□□□□ -1.61
CCDC93-204ENST00000460781 LSRQ86X29 649 aaPredicted RBP5.01□□□□□ -1.61
CCDC93-204ENST00000460781 CCDC144CPQ8IYA2 1237 aa5.01□□□□□ -1.61
CCDC93-204ENST00000460781 PMFBP1Q8TBY8 1022 aa5.01□□□□□ -1.61
CCDC93-204ENST00000460781 SYTL4Q96C24 671 aaPredicted RBP5.01□□□□□ -1.61
CCDC93-204ENST00000460781 ATG4CQ96DT6 458 aa5.01□□□□□ -1.61
CCDC93-204ENST00000460781 GMLQ99445 158 aa5.01□□□□□ -1.61
CCDC93-204ENST00000460781 SSBP4Q9BWG4 385 aaPredicted RBP5.01□□□□□ -1.61
CCDC93-204ENST00000460781 PHAXQ9H814 394 aaKnown RBP5.01□□□□□ -1.61
CCDC93-204ENST00000460781 CNNM2Q9H8M5 875 aa5.01□□□□□ -1.61
CCDC93-204ENST00000460781 UPK3BL1B0FP48 263 aa5□□□□□ -1.61
CCDC93-204ENST00000460781 UPK3BL2E5RIL1 263 aa5□□□□□ -1.61
CCDC93-204ENST00000460781 RGS13O14921 159 aa5□□□□□ -1.61
CCDC93-204ENST00000460781 CYP26A1O43174 497 aa5□□□□□ -1.61
CCDC93-204ENST00000460781 DDAH1O94760 285 aa5□□□□□ -1.61
CCDC93-204ENST00000460781 CBX7O95931 251 aa5□□□□□ -1.61
CCDC93-204ENST00000460781 GIPRP48546 466 aa5□□□□□ -1.61
CCDC93-204ENST00000460781 GNPTABQ3T906 1256 aa5□□□□□ -1.61
CCDC93-204ENST00000460781 CDCP2Q5VXM1 449 aa5□□□□□ -1.61
CCDC93-204ENST00000460781 OGFOD3Q6PK18 319 aa5□□□□□ -1.61
CCDC93-204ENST00000460781 CDH24Q86UP0 819 aa5□□□□□ -1.61
CCDC93-204ENST00000460781 C19orf47Q8N9M1 422 aaKnown RBP5□□□□□ -1.61
CCDC93-204ENST00000460781 RBBP8NLQ8NC74 664 aaPredicted RBP5□□□□□ -1.61
CCDC93-204ENST00000460781 SHKBP1Q8TBC3 707 aa5□□□□□ -1.61
CCDC93-204ENST00000460781 DHX38Q92620 1227 aaKnown RBP5□□□□□ -1.61
CCDC93-204ENST00000460781 SMARCC1Q92922 1105 aaPredicted RBP5□□□□□ -1.61
CCDC93-204ENST00000460781 DUSP23Q9BVJ7 150 aa5□□□□□ -1.61
CCDC93-204ENST00000460781 SEMA6BQ9H3T3 888 aa5□□□□□ -1.61
CCDC93-204ENST00000460781 ZNF408Q9H9D4 720 aa5□□□□□ -1.61
CCDC93-204ENST00000460781 CWC22Q9HCG8 908 aaKnown RBP5□□□□□ -1.61
CCDC93-204ENST00000460781 FBXL21Q9UKT6 434 aa5□□□□□ -1.61
CCDC93-204ENST00000460781 CEP131Q9UPN4 1083 aa5□□□□□ -1.61
CCDC93-204ENST00000460781 MAPK8IP1Q9UQF2 711 aa5□□□□□ -1.61
CCDC93-204ENST00000460781 URB2Q14146 1524 aaKnown RBP5□□□□□ -1.61
CCDC93-204ENST00000460781 SSU72P8A0A1W2PR75 194 aa4.99□□□□□ -1.61
CCDC93-204ENST00000460781 AGRPO00253 132 aa4.99□□□□□ -1.61
CCDC93-204ENST00000460781 DYNC1LI2O43237 492 aaPredicted RBP4.99□□□□□ -1.61
CCDC93-204ENST00000460781 ITIH2P19823 946 aa4.99□□□□□ -1.61
CCDC93-204ENST00000460781 KIR3DL1P43629 444 aa4.99□□□□□ -1.61
CCDC93-204ENST00000460781 TCEAL1Q15170 157 aa4.99□□□□□ -1.61
CCDC93-204ENST00000460781 NBPF12Q5TAG4 269 aaPredicted RBP4.99□□□□□ -1.61
CCDC93-204ENST00000460781 NBPF6Q5VWK0 638 aa4.99□□□□□ -1.61
CCDC93-204ENST00000460781 INTS3Q68E01 1043 aaKnown RBP4.99□□□□□ -1.61
CCDC93-204ENST00000460781 TTC6Q86TZ1 520 aa4.99□□□□□ -1.61
CCDC93-204ENST00000460781 TAB3Q8N5C8 712 aaPredicted RBP4.99□□□□□ -1.61
CCDC93-204ENST00000460781 BAHD1Q8TBE0 780 aaPredicted RBP4.99□□□□□ -1.61
CCDC93-204ENST00000460781 PPP1R14AQ96A00 147 aa4.99□□□□□ -1.61
CCDC93-204ENST00000460781 NBPF4Q96M43 638 aa4.99□□□□□ -1.61
CCDC93-204ENST00000460781 DNAJC2Q99543 621 aaKnown RBP4.99□□□□□ -1.61
CCDC93-204ENST00000460781 ASPNQ9BXN1 380 aa4.99□□□□□ -1.61
CCDC93-204ENST00000460781 GBP3Q9H0R5 595 aa4.99□□□□□ -1.61
CCDC93-204ENST00000460781 ANTXR1Q9H6X2 564 aa4.99□□□□□ -1.61
CCDC93-204ENST00000460781 FANCD2Q9BXW9 1451 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms