RNA–Protein interactions for RNA: ENST00000460628.1

PSMD2-209, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 2

Gene PSMD2, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-209	ENST00000460628	RBPJL	Q9UBG7	517 aa		11.28	□□□□□ -0.6
PSMD2-209	ENST00000460628	PTPRF	P10586	1907 aa		11.28	□□□□□ -0.6
PSMD2-209	ENST00000460628	DDX60L	Q5H9U9	1706 aa	Known RBP	11.27	□□□□□ -0.61
PSMD2-209	ENST00000460628	USP17L15	C9J2P7	530 aa		11.27	□□□□□ -0.61
PSMD2-209	ENST00000460628	USP17L13	C9JLJ4	530 aa		11.27	□□□□□ -0.61
PSMD2-209	ENST00000460628	USP17L11	C9JVI0	530 aa		11.27	□□□□□ -0.61
PSMD2-209	ENST00000460628	USP17L18	D6R9N7	530 aa		11.27	□□□□□ -0.61
PSMD2-209	ENST00000460628	USP17L22	D6RA61	530 aa		11.27	□□□□□ -0.61
PSMD2-209	ENST00000460628	USP17L17	D6RBQ6	530 aa		11.27	□□□□□ -0.61
PSMD2-209	ENST00000460628	USP17L19	D6RCP7	530 aa		11.27	□□□□□ -0.61
PSMD2-209	ENST00000460628	USP17L20	D6RJB6	530 aa		11.27	□□□□□ -0.61
PSMD2-209	ENST00000460628		H0YGN5	161 aa		11.27	□□□□□ -0.61
PSMD2-209	ENST00000460628	MPHOSPH10	O00566	681 aa	Known RBP	11.27	□□□□□ -0.61
PSMD2-209	ENST00000460628	SGPL1	O95470	568 aa		11.27	□□□□□ -0.61
PSMD2-209	ENST00000460628	CYP2B6	P20813	491 aa		11.27	□□□□□ -0.61
PSMD2-209	ENST00000460628	MAPK4	P31152	587 aa		11.27	□□□□□ -0.61
PSMD2-209	ENST00000460628	USP17L24	Q0WX57	530 aa		11.27	□□□□□ -0.61
PSMD2-209	ENST00000460628	SEPT2	Q15019	361 aa		11.27	□□□□□ -0.61
PSMD2-209	ENST00000460628	UBE3C	Q15386	1083 aa		11.27	□□□□□ -0.61
PSMD2-209	ENST00000460628	HABP4	Q5JVS0	413 aa	Known RBP	11.27	□□□□□ -0.61
PSMD2-209	ENST00000460628	POTEE	Q6S8J3	1075 aa		11.27	□□□□□ -0.61
PSMD2-209	ENST00000460628	CCAR1	Q8IX12	1150 aa	Known RBP	11.27	□□□□□ -0.61
PSMD2-209	ENST00000460628	DYNLL2	Q96FJ2	89 aa		11.27	□□□□□ -0.61
PSMD2-209	ENST00000460628	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
PSMD2-209	ENST00000460628	ATP8A2	Q9NTI2	1148 aa		11.27	□□□□□ -0.61
PSMD2-209	ENST00000460628	ECHDC1	Q9NTX5	307 aa		11.27	□□□□□ -0.61
PSMD2-209	ENST00000460628	TRIM32	Q13049	653 aa		11.26	□□□□□ -0.61
PSMD2-209	ENST00000460628	TMEM179	Q6ZVK1	233 aa		11.26	□□□□□ -0.61
PSMD2-209	ENST00000460628	GPR142	Q7Z601	462 aa		11.26	□□□□□ -0.61
PSMD2-209	ENST00000460628	TRIB2	Q92519	343 aa		11.26	□□□□□ -0.61
PSMD2-209	ENST00000460628	DPF3	Q92784	378 aa		11.26	□□□□□ -0.61
PSMD2-209	ENST00000460628	NUDT12	Q9BQG2	462 aa		11.26	□□□□□ -0.61
PSMD2-209	ENST00000460628	HTATIP2	Q9BUP3	242 aa		11.26	□□□□□ -0.61
PSMD2-209	ENST00000460628	CRISPLD2	Q9H0B8	497 aa		11.26	□□□□□ -0.61
PSMD2-209	ENST00000460628	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.26	□□□□□ -0.61
PSMD2-209	ENST00000460628	SWAP70	Q9UH65	585 aa		11.26	□□□□□ -0.61
PSMD2-209	ENST00000460628	RABGAP1	Q9Y3P9	1069 aa		11.26	□□□□□ -0.61
PSMD2-209	ENST00000460628	CYP2D7	A0A087X1C5	515 aa		11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628		A0A1W2PRG0	241 aa		11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628	SMIM22	K7EJ46	135 aa		11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628	CNMD	O75829	334 aa		11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628	TFRC	P02786	760 aa	Known RBP	11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628	PRKAR2A	P13861	404 aa	Known RBP	11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628	AKR1B1	P15121	316 aa		11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628	ZKSCAN1	P17029	563 aa	Predicted RBP	11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628	CCNA1	P78396	465 aa		11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628		Q3C1V9	767 aa		11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628	MORN1	Q5T089	497 aa		11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628	MAP3K21	Q5TCX8	1036 aa		11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628	C12orf60	Q5U649	245 aa		11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628	TSHZ3	Q63HK5	1081 aa		11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628	ZSCAN25	Q6NSZ9	544 aa		11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628	CATSPERG	Q6ZRH7	1159 aa		11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628	PLEKHH3	Q7Z736	793 aa		11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628	CLEC10A	Q8IUN9	316 aa		11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628	AMOTL1	Q8IY63	956 aa		11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628	DDRGK1	Q96HY6	314 aa		11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628	GPATCH3	Q96I76	525 aa		11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628	PUS7L	Q9H0K6	701 aa	Known RBP	11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628	DCTPP1	Q9H773	170 aa		11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628	CWC22	Q9HCG8	908 aa	Known RBP	11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628	SLC4A4	Q9Y6R1	1079 aa		11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628	FOCAD	Q5VW36	1801 aa		11.25	□□□□□ -0.61
PSMD2-209	ENST00000460628	ATAD5	Q96QE3	1844 aa		11.24	□□□□□ -0.61
PSMD2-209	ENST00000460628	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.24	□□□□□ -0.61
PSMD2-209	ENST00000460628	USP17L12	C9JPN9	530 aa		11.24	□□□□□ -0.61
PSMD2-209	ENST00000460628	USP17L21	D6R901	530 aa		11.24	□□□□□ -0.61
PSMD2-209	ENST00000460628	XRCC5	P13010	732 aa	Known RBP	11.24	□□□□□ -0.61
PSMD2-209	ENST00000460628	CAPN2	P17655	700 aa		11.24	□□□□□ -0.61
PSMD2-209	ENST00000460628	RGS2	P41220	211 aa		11.24	□□□□□ -0.61
PSMD2-209	ENST00000460628	ICA1	Q05084	483 aa		11.24	□□□□□ -0.61
PSMD2-209	ENST00000460628	LBX2	Q6XYB7	198 aa		11.24	□□□□□ -0.61
PSMD2-209	ENST00000460628	USP6NL	Q92738	828 aa		11.24	□□□□□ -0.61
PSMD2-209	ENST00000460628	APBA2	Q99767	749 aa		11.24	□□□□□ -0.61
PSMD2-209	ENST00000460628	TANGO6	Q9C0B7	1094 aa		11.24	□□□□□ -0.61
PSMD2-209	ENST00000460628	HMX1	Q9NP08	348 aa	Predicted RBP	11.24	□□□□□ -0.61
PSMD2-209	ENST00000460628	BTBD7	Q9P203	1132 aa		11.24	□□□□□ -0.61
PSMD2-209	ENST00000460628	COLQ	Q9Y215	455 aa	Predicted RBP	11.24	□□□□□ -0.61
PSMD2-209	ENST00000460628	RPTOR	Q8N122	1335 aa		11.24	□□□□□ -0.61
PSMD2-209	ENST00000460628	CDK8	P49336	464 aa		11.23	□□□□□ -0.61
PSMD2-209	ENST00000460628	CCL14	Q16627	93 aa		11.23	□□□□□ -0.61
PSMD2-209	ENST00000460628	WDR78	Q5VTH9	848 aa		11.23	□□□□□ -0.61
PSMD2-209	ENST00000460628	C16orf86	Q6ZW13	317 aa		11.23	□□□□□ -0.61
PSMD2-209	ENST00000460628	TRMT44	Q8IYL2	757 aa	Known RBP	11.23	□□□□□ -0.61
PSMD2-209	ENST00000460628	KBTBD3	Q8NAB2	608 aa		11.23	□□□□□ -0.61
PSMD2-209	ENST00000460628	DIS3L	Q8TF46	1054 aa	Known RBP	11.23	□□□□□ -0.61
PSMD2-209	ENST00000460628	PAWR	Q96IZ0	340 aa	Known RBP	11.23	□□□□□ -0.61
PSMD2-209	ENST00000460628	CCDC17	Q96LX7	622 aa		11.23	□□□□□ -0.61
PSMD2-209	ENST00000460628	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.23	□□□□□ -0.61
PSMD2-209	ENST00000460628	RANBP2	P49792	3224 aa	Known RBP	11.22	□□□□□ -0.61
PSMD2-209	ENST00000460628	GLRX3	O76003	335 aa	Known RBP	11.22	□□□□□ -0.61
PSMD2-209	ENST00000460628	RRP1	P56182	461 aa	Known RBP	11.22	□□□□□ -0.61
PSMD2-209	ENST00000460628	MAP2K5	Q13163	448 aa		11.22	□□□□□ -0.61
PSMD2-209	ENST00000460628	KIAA1755	Q5JYT7	1200 aa		11.22	□□□□□ -0.61
PSMD2-209	ENST00000460628	CTR9	Q6PD62	1173 aa		11.22	□□□□□ -0.61
PSMD2-209	ENST00000460628	CHRDL2	Q6WN34	429 aa		11.22	□□□□□ -0.61
PSMD2-209	ENST00000460628	SPICE1	Q8N0Z3	855 aa		11.22	□□□□□ -0.61
PSMD2-209	ENST00000460628	ANKLE1	Q8NAG6	615 aa		11.22	□□□□□ -0.61
PSMD2-209	ENST00000460628	NAV1	Q8NEY1	1877 aa		11.22	□□□□□ -0.61
PSMD2-209	ENST00000460628	APPBP2	Q92624	585 aa		11.22	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms