RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 DHX16O60231 1041 aaKnown RBP19.66■□□□□ 0.74
NELFCD-201ENST00000460601 RTN1Q16799 776 aa19.66■□□□□ 0.74
NELFCD-201ENST00000460601 FAM184AQ8NB25 1140 aa19.66■□□□□ 0.74
NELFCD-201ENST00000460601 FAM151AQ8WW52 585 aa19.66■□□□□ 0.74
NELFCD-201ENST00000460601 MTMR6Q9Y217 621 aa19.66■□□□□ 0.74
NELFCD-201ENST00000460601 RRP1BQ14684 758 aaKnown RBP19.65■□□□□ 0.74
NELFCD-201ENST00000460601 DGKHQ86XP1 1220 aa19.65■□□□□ 0.74
NELFCD-201ENST00000460601 PNMA1Q8ND90 353 aa19.65■□□□□ 0.74
NELFCD-201ENST00000460601 AIFM3Q96NN9 605 aa19.65■□□□□ 0.74
NELFCD-201ENST00000460601 TMEM47Q9BQJ4 181 aa19.65■□□□□ 0.74
NELFCD-201ENST00000460601 TCP11L1Q9NUJ3 509 aa19.65■□□□□ 0.74
NELFCD-201ENST00000460601 GDF11O95390 407 aa19.64■□□□□ 0.74
NELFCD-201ENST00000460601 MIGA2Q7L4E1 593 aa19.64■□□□□ 0.74
NELFCD-201ENST00000460601 FERMT3Q86UX7 667 aa19.64■□□□□ 0.74
NELFCD-201ENST00000460601 KAT14Q9H8E8 782 aa19.64■□□□□ 0.74
NELFCD-201ENST00000460601 HACL1Q9UJ83 578 aa19.64■□□□□ 0.74
NELFCD-201ENST00000460601 NID2Q14112 1375 aa19.64■□□□□ 0.73
NELFCD-201ENST00000460601 PLEKHA8P1O95397 391 aa19.64■□□□□ 0.73
NELFCD-201ENST00000460601 JAG1P78504 1218 aa19.64■□□□□ 0.73
NELFCD-201ENST00000460601 GUCY1B3Q02153 619 aa19.64■□□□□ 0.73
NELFCD-201ENST00000460601 TRIM34Q9BYJ4 488 aa19.64■□□□□ 0.73
NELFCD-201ENST00000460601 ORC3Q9UBD5 711 aaPredicted RBP19.64■□□□□ 0.73
NELFCD-201ENST00000460601 ZSCAN22P10073 491 aaPredicted RBP19.63■□□□□ 0.73
NELFCD-201ENST00000460601 HMGN5P82970 282 aaKnown RBP19.63■□□□□ 0.73
NELFCD-201ENST00000460601 RASA3Q14644 834 aa19.63■□□□□ 0.73
NELFCD-201ENST00000460601 OTUD7BQ6GQQ9 843 aa19.63■□□□□ 0.73
NELFCD-201ENST00000460601 WDR33Q9C0J8 1336 aaKnown RBP19.63■□□□□ 0.73
NELFCD-201ENST00000460601 PLIN4Q96Q06 1357 aa19.63■□□□□ 0.73
NELFCD-201ENST00000460601 H7C1D1 291 aa19.63■□□□□ 0.73
NELFCD-201ENST00000460601 HIRAP54198 1017 aaPredicted RBP19.63■□□□□ 0.73
NELFCD-201ENST00000460601 CERKLQ49MI3 558 aaPredicted RBP19.63■□□□□ 0.73
NELFCD-201ENST00000460601 TATDN1Q6P1N9 297 aa19.63■□□□□ 0.73
NELFCD-201ENST00000460601 METTL16Q86W50 562 aaKnown RBP19.63■□□□□ 0.73
NELFCD-201ENST00000460601 MTMR4Q9NYA4 1195 aa19.63■□□□□ 0.73
NELFCD-201ENST00000460601 PGAP2Q9UHJ9 254 aa19.63■□□□□ 0.73
NELFCD-201ENST00000460601 COL2A1P02458 1487 aaPredicted RBP19.63■□□□□ 0.73
NELFCD-201ENST00000460601 hCG_1642624A0A1W2PR95 340 aa19.62■□□□□ 0.73
NELFCD-201ENST00000460601 GUCY1A2P33402 732 aa19.62■□□□□ 0.73
NELFCD-201ENST00000460601 FKBP1CQ5VVH2 108 aa19.62■□□□□ 0.73
NELFCD-201ENST00000460601 FOXP4Q8IVH2 680 aaPredicted RBP19.62■□□□□ 0.73
NELFCD-201ENST00000460601 LRRC47Q8N1G4 583 aaKnown RBP19.62■□□□□ 0.73
NELFCD-201ENST00000460601 SLC26A6Q9BXS9 759 aa19.62■□□□□ 0.73
NELFCD-201ENST00000460601 IGKV6D-41A0A0C4DH26 115 aa19.61■□□□□ 0.73
NELFCD-201ENST00000460601 DDAH1O94760 285 aa19.61■□□□□ 0.73
NELFCD-201ENST00000460601 NBPF11Q86T75 865 aa19.61■□□□□ 0.73
NELFCD-201ENST00000460601 FAM83AQ86UY5 434 aa19.61■□□□□ 0.73
NELFCD-201ENST00000460601 STAG2Q8N3U4 1231 aa19.61■□□□□ 0.73
NELFCD-201ENST00000460601 ANKS1AQ92625 1134 aa19.61■□□□□ 0.73
NELFCD-201ENST00000460601 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.61■□□□□ 0.73
NELFCD-201ENST00000460601 BAG4O95429 457 aaKnown RBP19.61■□□□□ 0.73
NELFCD-201ENST00000460601 F13A1P00488 732 aa19.61■□□□□ 0.73
NELFCD-201ENST00000460601 RCAN1P53805 252 aa19.61■□□□□ 0.73
NELFCD-201ENST00000460601 ANGEL2Q5VTE6 544 aaKnown RBP19.61■□□□□ 0.73
NELFCD-201ENST00000460601 PRAMEF18Q5VWM3 479 aa19.61■□□□□ 0.73
NELFCD-201ENST00000460601 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.61■□□□□ 0.73
NELFCD-201ENST00000460601 PDCP20941 246 aa19.6■□□□□ 0.73
NELFCD-201ENST00000460601 NT5C2P49902 561 aa19.6■□□□□ 0.73
NELFCD-201ENST00000460601 ATP2B2Q01814 1243 aa19.6■□□□□ 0.73
NELFCD-201ENST00000460601 FAM173BQ6P4H8 233 aa19.6■□□□□ 0.73
NELFCD-201ENST00000460601 TEPSINQ96N21 525 aa19.6■□□□□ 0.73
NELFCD-201ENST00000460601 CLIP2Q9UDT6 1046 aa19.6■□□□□ 0.73
NELFCD-201ENST00000460601 GREB1LQ9C091 1923 aaPredicted RBP19.6■□□□□ 0.73
NELFCD-201ENST00000460601 GOLGA8HP0CJ92 632 aa19.6■□□□□ 0.73
NELFCD-201ENST00000460601 IFNAR1P17181 557 aa19.6■□□□□ 0.73
NELFCD-201ENST00000460601 BAZ2BQ9UIF8 2168 aaKnown RBP19.59■□□□□ 0.73
NELFCD-201ENST00000460601 H3BQV1 296 aa19.59■□□□□ 0.73
NELFCD-201ENST00000460601 SOCS7O14512 581 aa19.59■□□□□ 0.73
NELFCD-201ENST00000460601 CDKL5O76039 1030 aa19.59■□□□□ 0.73
NELFCD-201ENST00000460601 NOVP48745 357 aa19.59■□□□□ 0.73
NELFCD-201ENST00000460601 FUT2Q10981 343 aa19.59■□□□□ 0.73
NELFCD-201ENST00000460601 SEPT2Q15019 361 aa19.59■□□□□ 0.73
NELFCD-201ENST00000460601 IFFO2Q5TF58 517 aa19.59■□□□□ 0.73
NELFCD-201ENST00000460601 SRBD1Q8N5C6 995 aaKnown RBP19.59■□□□□ 0.73
NELFCD-201ENST00000460601 CTCFLQ8NI51 663 aaPredicted RBP19.59■□□□□ 0.73
NELFCD-201ENST00000460601 PIBF1Q8WXW3 757 aa19.59■□□□□ 0.73
NELFCD-201ENST00000460601 DEFB129Q9H1M3 183 aa19.59■□□□□ 0.73
NELFCD-201ENST00000460601 CPVLQ9H3G5 476 aa19.59■□□□□ 0.73
NELFCD-201ENST00000460601 GGA3Q9NZ52 723 aa19.59■□□□□ 0.73
NELFCD-201ENST00000460601 CCDC196A0A1B0GTZ2 297 aa19.58■□□□□ 0.73
NELFCD-201ENST00000460601 GH2P01242 217 aa19.58■□□□□ 0.73
NELFCD-201ENST00000460601 CALM1P0DP23 149 aa19.58■□□□□ 0.73
NELFCD-201ENST00000460601 CALM2P0DP24 149 aa19.58■□□□□ 0.73
NELFCD-201ENST00000460601 CALM3P0DP25 149 aa19.58■□□□□ 0.73
NELFCD-201ENST00000460601 MCM4P33991 863 aa19.58■□□□□ 0.73
NELFCD-201ENST00000460601 MMP14P50281 582 aa19.58■□□□□ 0.73
NELFCD-201ENST00000460601 CPLX2Q6PUV4 134 aaKnown RBP19.58■□□□□ 0.73
NELFCD-201ENST00000460601 MAD2L2Q9UI95 211 aa19.58■□□□□ 0.73
NELFCD-201ENST00000460601 FMNL1O95466 1100 aaPredicted RBP19.58■□□□□ 0.72
NELFCD-201ENST00000460601 SSRP1Q08945 709 aaKnown RBP19.58■□□□□ 0.72
NELFCD-201ENST00000460601 ABCB5Q2M3G0 1257 aa19.58■□□□□ 0.72
NELFCD-201ENST00000460601 CCDC178Q5BJE1 867 aa19.58■□□□□ 0.72
NELFCD-201ENST00000460601 MCTP1Q6DN14 999 aa19.58■□□□□ 0.72
NELFCD-201ENST00000460601 USP17L2Q6R6M4 530 aa19.58■□□□□ 0.72
NELFCD-201ENST00000460601 TMTC3Q6ZXV5 915 aa19.58■□□□□ 0.72
NELFCD-201ENST00000460601 CCDC17Q96LX7 622 aa19.58■□□□□ 0.72
NELFCD-201ENST00000460601 HERC5Q9UII4 1024 aaKnown RBP19.58■□□□□ 0.72
NELFCD-201ENST00000460601 FZD1Q9UP38 647 aa19.58■□□□□ 0.72
NELFCD-201ENST00000460601 TTLL1O95922 423 aa19.57■□□□□ 0.72
NELFCD-201ENST00000460601 TOP1P11387 765 aaKnown RBP19.57■□□□□ 0.72
NELFCD-201ENST00000460601 TNNI2P48788 182 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms