RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 TMX4Q9H1E5 349 aaPredicted RBP16.3■□□□□ 0.2
ERCC3-205ENST00000460485 FAM217BQ9NTX9 383 aaPredicted RBP16.3■□□□□ 0.2
ERCC3-205ENST00000460485 ABT1Q9ULW3 272 aaKnown RBP16.3■□□□□ 0.2
ERCC3-205ENST00000460485 BMP15O95972 392 aa16.29■□□□□ 0.2
ERCC3-205ENST00000460485 TPM3P06753 285 aa16.29■□□□□ 0.2
ERCC3-205ENST00000460485 KIF5BP33176 963 aa16.29■□□□□ 0.2
ERCC3-205ENST00000460485 CLCN1P35523 988 aa16.29■□□□□ 0.2
ERCC3-205ENST00000460485 DYNLL1P63167 89 aaKnown RBP16.29■□□□□ 0.2
ERCC3-205ENST00000460485 GPSM2P81274 684 aa16.29■□□□□ 0.2
ERCC3-205ENST00000460485 TYRO3Q06418 890 aa16.29■□□□□ 0.2
ERCC3-205ENST00000460485 RILPL1Q5EBL4 403 aa16.29■□□□□ 0.2
ERCC3-205ENST00000460485 CCAR1Q8IX12 1150 aaKnown RBP16.29■□□□□ 0.2
ERCC3-205ENST00000460485 CRACR2BQ8N4Y2 399 aaPredicted RBP16.29■□□□□ 0.2
ERCC3-205ENST00000460485 ENAHQ8N8S7 591 aaPredicted RBP16.29■□□□□ 0.2
ERCC3-205ENST00000460485 SLC26A6Q9BXS9 759 aa16.29■□□□□ 0.2
ERCC3-205ENST00000460485 BRMS1Q9HCU9 246 aa16.29■□□□□ 0.2
ERCC3-205ENST00000460485 CD209Q9NNX6 404 aa16.29■□□□□ 0.2
ERCC3-205ENST00000460485 AATFQ9NY61 560 aaKnown RBP eCLIP16.29■□□□□ 0.2
ERCC3-205ENST00000460485 CEP131Q9UPN4 1083 aa16.29■□□□□ 0.2
ERCC3-205ENST00000460485 PDE4DIPQ5VU43 2346 aa16.28■□□□□ 0.2
ERCC3-205ENST00000460485 USP17L12C9JPN9 530 aa16.28■□□□□ 0.2
ERCC3-205ENST00000460485 USP17L21D6R901 530 aa16.28■□□□□ 0.2
ERCC3-205ENST00000460485 PPEF1O14829 653 aaPredicted RBP16.28■□□□□ 0.2
ERCC3-205ENST00000460485 RANBP6O60518 1105 aaKnown RBP16.28■□□□□ 0.2
ERCC3-205ENST00000460485 MMP1P03956 469 aa16.28■□□□□ 0.2
ERCC3-205ENST00000460485 SLC39A14Q15043 492 aa16.28■□□□□ 0.2
ERCC3-205ENST00000460485 MAP1SQ66K74 1059 aaPredicted RBP16.28■□□□□ 0.2
ERCC3-205ENST00000460485 CTCFLQ8NI51 663 aaPredicted RBP16.28■□□□□ 0.2
ERCC3-205ENST00000460485 ANKS1AQ92625 1134 aa16.28■□□□□ 0.2
ERCC3-205ENST00000460485 TIGD1Q96MW7 591 aa16.28■□□□□ 0.2
ERCC3-205ENST00000460485 GPR101Q96P66 508 aaPredicted RBP16.28■□□□□ 0.2
ERCC3-205ENST00000460485 COA1Q9GZY4 146 aa16.28■□□□□ 0.2
ERCC3-205ENST00000460485 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.28■□□□□ 0.2
ERCC3-205ENST00000460485 TCP11L1Q9NUJ3 509 aa16.28■□□□□ 0.2
ERCC3-205ENST00000460485 USP25Q9UHP3 1055 aa16.28■□□□□ 0.2
ERCC3-205ENST00000460485 ATP6V0A2Q9Y487 856 aa16.28■□□□□ 0.2
ERCC3-205ENST00000460485 PRPF3O43395 683 aaKnown RBP16.27■□□□□ 0.2
ERCC3-205ENST00000460485 CA12O43570 354 aa16.27■□□□□ 0.2
ERCC3-205ENST00000460485 NR1I2O75469 434 aa16.27■□□□□ 0.2
ERCC3-205ENST00000460485 MSNP26038 577 aaKnown RBP16.27■□□□□ 0.2
ERCC3-205ENST00000460485 MAP2K2P36507 400 aa16.27■□□□□ 0.2
ERCC3-205ENST00000460485 USP5P45974 858 aa16.27■□□□□ 0.2
ERCC3-205ENST00000460485 GNAQP50148 359 aa16.27■□□□□ 0.2
ERCC3-205ENST00000460485 GUCY1B3Q02153 619 aa16.27■□□□□ 0.2
ERCC3-205ENST00000460485 STX1AQ16623 288 aa16.27■□□□□ 0.2
ERCC3-205ENST00000460485 CCDC93Q567U6 631 aa16.27■□□□□ 0.2
ERCC3-205ENST00000460485 C12orf60Q5U649 245 aa16.27■□□□□ 0.2
ERCC3-205ENST00000460485 DGKHQ86XP1 1220 aa16.27■□□□□ 0.2
ERCC3-205ENST00000460485 NOSTRINQ8IVI9 506 aa16.27■□□□□ 0.2
ERCC3-205ENST00000460485 FSIP1Q8NA03 581 aa16.27■□□□□ 0.2
ERCC3-205ENST00000460485 ENGASEQ8NFI3 743 aa16.27■□□□□ 0.2
ERCC3-205ENST00000460485 TACC3Q9Y6A5 838 aa16.27■□□□□ 0.2
ERCC3-205ENST00000460485 THSD7BQ9C0I4 1608 aa16.27■□□□□ 0.19
ERCC3-205ENST00000460485 GAKO14976 1311 aa16.26■□□□□ 0.19
ERCC3-205ENST00000460485 FAM237AA0A1B0GTK4 181 aa16.26■□□□□ 0.19
ERCC3-205ENST00000460485 FZD9O00144 591 aa16.26■□□□□ 0.19
ERCC3-205ENST00000460485 CMA1P23946 247 aa16.26■□□□□ 0.19
ERCC3-205ENST00000460485 NBPF11Q86T75 865 aa16.26■□□□□ 0.19
ERCC3-205ENST00000460485 TXNRD3Q86VQ6 643 aa16.26■□□□□ 0.19
ERCC3-205ENST00000460485 ELOA2Q8IYF1 753 aaPredicted RBP16.26■□□□□ 0.19
ERCC3-205ENST00000460485 RTKN2Q8IZC4 609 aa16.26■□□□□ 0.19
ERCC3-205ENST00000460485 GPC2Q8N158 579 aa16.26■□□□□ 0.19
ERCC3-205ENST00000460485 RNF214Q8ND24 703 aa16.26■□□□□ 0.19
ERCC3-205ENST00000460485 TBC1D16Q8TBP0 767 aa16.26■□□□□ 0.19
ERCC3-205ENST00000460485 CAPNS2Q96L46 248 aa16.26■□□□□ 0.19
ERCC3-205ENST00000460485 NAT10Q9H0A0 1025 aaKnown RBP16.26■□□□□ 0.19
ERCC3-205ENST00000460485 PCDHA7Q9UN72 937 aa16.26■□□□□ 0.19
ERCC3-205ENST00000460485 ZNF541Q9H0D2 1346 aa16.25■□□□□ 0.19
ERCC3-205ENST00000460485 GPR75-ASB3A0A0A6YYF3 556 aa16.25■□□□□ 0.19
ERCC3-205ENST00000460485 GOLGA6L6A8MZA4 724 aa16.25■□□□□ 0.19
ERCC3-205ENST00000460485 CUTAO60888 179 aa16.25■□□□□ 0.19
ERCC3-205ENST00000460485 FOSBP53539 338 aa16.25■□□□□ 0.19
ERCC3-205ENST00000460485 CCDC24Q8N4L8 307 aa16.25■□□□□ 0.19
ERCC3-205ENST00000460485 PHKBQ93100 1093 aa16.25■□□□□ 0.19
ERCC3-205ENST00000460485 EYA3Q99504 573 aa16.25■□□□□ 0.19
ERCC3-205ENST00000460485 LZTS2Q9BRK4 669 aa16.25■□□□□ 0.19
ERCC3-205ENST00000460485 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.25■□□□□ 0.19
ERCC3-205ENST00000460485 SENP2Q9HC62 589 aa16.25■□□□□ 0.19
ERCC3-205ENST00000460485 ANO10Q9NW15 660 aa16.25■□□□□ 0.19
ERCC3-205ENST00000460485 MCM9Q9NXL9 1143 aa16.25■□□□□ 0.19
ERCC3-205ENST00000460485 NOL7Q9UMY1 257 aaKnown RBP16.25■□□□□ 0.19
ERCC3-205ENST00000460485 MYO3BQ8WXR4 1341 aa16.24■□□□□ 0.19
ERCC3-205ENST00000460485 TSPY2A6NKD2 308 aa16.24■□□□□ 0.19
ERCC3-205ENST00000460485 KIF28PB7ZC32 967 aa16.24■□□□□ 0.19
ERCC3-205ENST00000460485 TROAPQ12815 778 aa16.24■□□□□ 0.19
ERCC3-205ENST00000460485 SNW1Q13573 536 aaKnown RBP16.24■□□□□ 0.19
ERCC3-205ENST00000460485 ZRSR1Q15695 479 aaKnown RBP16.24■□□□□ 0.19
ERCC3-205ENST00000460485 TMTC3Q6ZXV5 915 aa16.24■□□□□ 0.19
ERCC3-205ENST00000460485 FMR1NBQ8N0W7 255 aaPredicted RBP16.24■□□□□ 0.19
ERCC3-205ENST00000460485 NUP133Q8WUM0 1156 aa16.24■□□□□ 0.19
ERCC3-205ENST00000460485 CCDC34Q96HJ3 373 aa16.24■□□□□ 0.19
ERCC3-205ENST00000460485 RTFDC1Q9BY42 306 aaPredicted RBP16.24■□□□□ 0.19
ERCC3-205ENST00000460485 HOOK1Q9UJC3 728 aaKnown RBP16.24■□□□□ 0.19
ERCC3-205ENST00000460485 MRVI1Q9Y6F6 885 aa16.24■□□□□ 0.19
ERCC3-205ENST00000460485 WTIPA6NIX2 430 aaPredicted RBP16.23■□□□□ 0.19
ERCC3-205ENST00000460485 DTNBO60941 627 aa16.23■□□□□ 0.19
ERCC3-205ENST00000460485 POLR3DP05423 398 aaPredicted RBP16.23■□□□□ 0.19
ERCC3-205ENST00000460485 RXRAP19793 462 aa16.23■□□□□ 0.19
ERCC3-205ENST00000460485 FKBP1AP62942 108 aaKnown RBP16.23■□□□□ 0.19
ERCC3-205ENST00000460485 CEBPZQ03701 1054 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms