RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 GUCY1A2P33402 732 aa12.86□□□□□ -0.35
CCDC12-204ENST00000460035 OTUD7BQ6GQQ9 843 aa12.86□□□□□ -0.35
CCDC12-204ENST00000460035 TBC1D10CQ8IV04 446 aa12.86□□□□□ -0.35
CCDC12-204ENST00000460035 BRI3BPQ8WY22 251 aa12.86□□□□□ -0.35
CCDC12-204ENST00000460035 FEZ1Q99689 392 aa12.86□□□□□ -0.35
CCDC12-204ENST00000460035 LSG1Q9H089 658 aaKnown RBP12.86□□□□□ -0.35
CCDC12-204ENST00000460035 KANSL2Q9H9L4 492 aa12.86□□□□□ -0.35
CCDC12-204ENST00000460035 RBM8AQ9Y5S9 174 aaKnown RBP12.86□□□□□ -0.35
CCDC12-204ENST00000460035 TACC3Q9Y6A5 838 aa12.86□□□□□ -0.35
CCDC12-204ENST00000460035 MGAMO43451 1857 aa12.86□□□□□ -0.35
CCDC12-204ENST00000460035 DOCK3Q8IZD9 2030 aa12.86□□□□□ -0.35
CCDC12-204ENST00000460035 MYH6P13533 1939 aa12.86□□□□□ -0.35
CCDC12-204ENST00000460035 COL11A1P12107 1806 aaPredicted RBP12.85□□□□□ -0.35
CCDC12-204ENST00000460035 TSPY2A6NKD2 308 aa12.85□□□□□ -0.35
CCDC12-204ENST00000460035 C19orf81C9J6K1 198 aa12.85□□□□□ -0.35
CCDC12-204ENST00000460035 USP17L10C9JJH3 530 aa12.85□□□□□ -0.35
CCDC12-204ENST00000460035 TRPA1O75762 1119 aa12.85□□□□□ -0.35
CCDC12-204ENST00000460035 NT5C2P49902 561 aa12.85□□□□□ -0.35
CCDC12-204ENST00000460035 HMGCS2P54868 508 aa12.85□□□□□ -0.35
CCDC12-204ENST00000460035 BACE1P56817 501 aa12.85□□□□□ -0.35
CCDC12-204ENST00000460035 MTMR2Q13614 643 aa12.85□□□□□ -0.35
CCDC12-204ENST00000460035 ZYXQ15942 572 aaKnown RBP12.85□□□□□ -0.35
CCDC12-204ENST00000460035 FASTKD5Q7L8L6 764 aaKnown RBP12.85□□□□□ -0.35
CCDC12-204ENST00000460035 IFNL1Q8IU54 200 aa12.85□□□□□ -0.35
CCDC12-204ENST00000460035 CLEC10AQ8IUN9 316 aa12.85□□□□□ -0.35
CCDC12-204ENST00000460035 ACER1Q8TDN7 264 aa12.85□□□□□ -0.35
CCDC12-204ENST00000460035 STAG1Q8WVM7 1258 aa12.85□□□□□ -0.35
CCDC12-204ENST00000460035 TMOD4Q9NZQ9 345 aa12.85□□□□□ -0.35
CCDC12-204ENST00000460035 A0A0G2JLL6 359 aaPredicted RBP12.84□□□□□ -0.35
CCDC12-204ENST00000460035 RAD21O60216 631 aa12.84□□□□□ -0.35
CCDC12-204ENST00000460035 REC8O95072 547 aa12.84□□□□□ -0.35
CCDC12-204ENST00000460035 CYP21A2P08686 494 aa12.84□□□□□ -0.35
CCDC12-204ENST00000460035 ICA1Q05084 483 aa12.84□□□□□ -0.35
CCDC12-204ENST00000460035 USP17L2Q6R6M4 530 aa12.84□□□□□ -0.35
CCDC12-204ENST00000460035 PRRT2Q7Z6L0 340 aaPredicted RBP12.84□□□□□ -0.35
CCDC12-204ENST00000460035 NEDD1Q8NHV4 660 aa12.84□□□□□ -0.35
CCDC12-204ENST00000460035 PTPN18Q99952 460 aa12.84□□□□□ -0.35
CCDC12-204ENST00000460035 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCDC12-204ENST00000460035 ARHGEF10LQ9HCE6 1279 aa12.84□□□□□ -0.35
CCDC12-204ENST00000460035 WBP1LQ9NX94 342 aa12.84□□□□□ -0.35
CCDC12-204ENST00000460035 RNF186Q9NXI6 227 aa12.84□□□□□ -0.35
CCDC12-204ENST00000460035 IGKV6D-41A0A0C4DH26 115 aa12.83□□□□□ -0.36
CCDC12-204ENST00000460035 BTBD19C9JJ37 291 aa12.83□□□□□ -0.36
CCDC12-204ENST00000460035 IGF2BP3O00425 579 aaKnown RBP eCLIP12.83□□□□□ -0.36
CCDC12-204ENST00000460035 ALDH1A1P00352 501 aa12.83□□□□□ -0.36
CCDC12-204ENST00000460035 EEF2P13639 858 aaKnown RBP12.83□□□□□ -0.36
CCDC12-204ENST00000460035 USP14P54578 494 aa12.83□□□□□ -0.36
CCDC12-204ENST00000460035 TRDNQ13061 729 aa12.83□□□□□ -0.36
CCDC12-204ENST00000460035 DGKZQ13574 1117 aa12.83□□□□□ -0.36
CCDC12-204ENST00000460035 MOGSQ13724 837 aa12.83□□□□□ -0.36
CCDC12-204ENST00000460035 SH3D19Q5HYK7 790 aa12.83□□□□□ -0.36
CCDC12-204ENST00000460035 SIAH1Q8IUQ4 282 aa12.83□□□□□ -0.36
CCDC12-204ENST00000460035 FAM43AQ8N2R8 423 aa12.83□□□□□ -0.36
CCDC12-204ENST00000460035 ESR2Q92731 530 aa12.83□□□□□ -0.36
CCDC12-204ENST00000460035 KRT23Q9C075 422 aa12.83□□□□□ -0.36
CCDC12-204ENST00000460035 ZCCHC17Q9NP64 241 aaKnown RBP12.83□□□□□ -0.36
CCDC12-204ENST00000460035 CLIP2Q9UDT6 1046 aa12.83□□□□□ -0.36
CCDC12-204ENST00000460035 PCNTO95613 3336 aa12.82□□□□□ -0.36
CCDC12-204ENST00000460035 A0A1W2PRG0 241 aa12.82□□□□□ -0.36
CCDC12-204ENST00000460035 B4E1Z4 1266 aa12.82□□□□□ -0.36
CCDC12-204ENST00000460035 PDHXO00330 501 aa12.82□□□□□ -0.36
CCDC12-204ENST00000460035 EPB41L2O43491 1005 aaKnown RBP12.82□□□□□ -0.36
CCDC12-204ENST00000460035 KDM4AO75164 1064 aa12.82□□□□□ -0.36
CCDC12-204ENST00000460035 HSPA1AP0DMV8 641 aaKnown RBP12.82□□□□□ -0.36
CCDC12-204ENST00000460035 HSPA1BP0DMV9 641 aaKnown RBP12.82□□□□□ -0.36
CCDC12-204ENST00000460035 RNF20Q5VTR2 975 aa12.82□□□□□ -0.36
CCDC12-204ENST00000460035 CREB3L3Q68CJ9 461 aa12.82□□□□□ -0.36
CCDC12-204ENST00000460035 ANKRD23Q86SG2 305 aa12.82□□□□□ -0.36
CCDC12-204ENST00000460035 PROCA1Q8NCQ7 364 aaPredicted RBP12.82□□□□□ -0.36
CCDC12-204ENST00000460035 CEP95Q96GE4 821 aa12.82□□□□□ -0.36
CCDC12-204ENST00000460035 KIAA1683Q9H0B3 1180 aa12.82□□□□□ -0.36
CCDC12-204ENST00000460035 SH2D4AQ9H788 454 aa12.82□□□□□ -0.36
CCDC12-204ENST00000460035 CNNM2Q9H8M5 875 aa12.82□□□□□ -0.36
CCDC12-204ENST00000460035 EMILIN3Q9NT22 766 aa12.82□□□□□ -0.36
CCDC12-204ENST00000460035 MTMR4Q9NYA4 1195 aa12.82□□□□□ -0.36
CCDC12-204ENST00000460035 TSKSQ9UJT2 592 aa12.82□□□□□ -0.36
CCDC12-204ENST00000460035 NEDD4P46934 1319 aa12.82□□□□□ -0.36
CCDC12-204ENST00000460035 E7EWF7 191 aa12.81□□□□□ -0.36
CCDC12-204ENST00000460035 SLC27A2O14975 620 aa12.81□□□□□ -0.36
CCDC12-204ENST00000460035 CA12O43570 354 aa12.81□□□□□ -0.36
CCDC12-204ENST00000460035 NMT2O60551 498 aa12.81□□□□□ -0.36
CCDC12-204ENST00000460035 TBC1D8O95759 1140 aa12.81□□□□□ -0.36
CCDC12-204ENST00000460035 TTLL1O95922 423 aa12.81□□□□□ -0.36
CCDC12-204ENST00000460035 NECTIN1Q15223 517 aa12.81□□□□□ -0.36
CCDC12-204ENST00000460035 TAF1CQ15572 869 aaPredicted RBP12.81□□□□□ -0.36
CCDC12-204ENST00000460035 PPP4R3BQ5MIZ7 849 aa12.81□□□□□ -0.36
CCDC12-204ENST00000460035 TREML2Q5T2D2 321 aa12.81□□□□□ -0.36
CCDC12-204ENST00000460035 GPAT2Q6NUI2 795 aa12.81□□□□□ -0.36
CCDC12-204ENST00000460035 C12orf42Q96LP6 360 aa12.81□□□□□ -0.36
CCDC12-204ENST00000460035 ZKSCAN3Q9BRR0 538 aa12.81□□□□□ -0.36
CCDC12-204ENST00000460035 CFHR5Q9BXR6 569 aa12.81□□□□□ -0.36
CCDC12-204ENST00000460035 SAGE1Q9NXZ1 904 aa12.81□□□□□ -0.36
CCDC12-204ENST00000460035 NYAP2Q9P242 653 aa12.81□□□□□ -0.36
CCDC12-204ENST00000460035 SYNPO2Q9UMS6 1093 aa12.81□□□□□ -0.36
CCDC12-204ENST00000460035 STX8Q9UNK0 236 aa12.81□□□□□ -0.36
CCDC12-204ENST00000460035 TMX2Q9Y320 296 aa12.81□□□□□ -0.36
CCDC12-204ENST00000460035 ZNFX1Q9P2E3 1918 aaKnown RBP12.81□□□□□ -0.36
CCDC12-204ENST00000460035 A0A0G2JMZ2 1700 aa12.81□□□□□ -0.36
CCDC12-204ENST00000460035 ZKSCAN1P17029 563 aaPredicted RBP12.8□□□□□ -0.36
CCDC12-204ENST00000460035 OSBPP22059 807 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms