RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 PXYLP1Q8TE99 480 aa25.15■■□□□ 1.62
SRM-202ENST00000459997 DYNLL2Q96FJ2 89 aa25.15■■□□□ 1.62
SRM-202ENST00000459997 DDRGK1Q96HY6 314 aa25.15■■□□□ 1.62
SRM-202ENST00000459997 CRBNQ96SW2 442 aa25.15■■□□□ 1.62
SRM-202ENST00000459997 SWAP70Q9UH65 585 aa25.15■■□□□ 1.62
SRM-202ENST00000459997 MYH8P13535 1937 aa25.15■■□□□ 1.62
SRM-202ENST00000459997 PEX10O60683 326 aa25.14■■□□□ 1.62
SRM-202ENST00000459997 GPRC5AQ8NFJ5 357 aa25.14■■□□□ 1.62
SRM-202ENST00000459997 RNF208Q9H0X6 261 aa25.14■■□□□ 1.62
SRM-202ENST00000459997 TXNRD2Q9NNW7 524 aa25.14■■□□□ 1.62
SRM-202ENST00000459997 CYP2D7A0A087X1C5 515 aa25.13■■□□□ 1.61
SRM-202ENST00000459997 INHAP05111 366 aa25.13■■□□□ 1.61
SRM-202ENST00000459997 GTF3C2Q8WUA4 911 aaPredicted RBP25.13■■□□□ 1.61
SRM-202ENST00000459997 RBPJLQ9UBG7 517 aa25.13■■□□□ 1.61
SRM-202ENST00000459997 USP17L15C9J2P7 530 aa25.12■■□□□ 1.61
SRM-202ENST00000459997 USP17L13C9JLJ4 530 aa25.12■■□□□ 1.61
SRM-202ENST00000459997 USP17L12C9JPN9 530 aa25.12■■□□□ 1.61
SRM-202ENST00000459997 USP17L11C9JVI0 530 aa25.12■■□□□ 1.61
SRM-202ENST00000459997 USP17L21D6R901 530 aa25.12■■□□□ 1.61
SRM-202ENST00000459997 USP17L18D6R9N7 530 aa25.12■■□□□ 1.61
SRM-202ENST00000459997 USP17L22D6RA61 530 aa25.12■■□□□ 1.61
SRM-202ENST00000459997 USP17L17D6RBQ6 530 aa25.12■■□□□ 1.61
SRM-202ENST00000459997 USP17L19D6RCP7 530 aa25.12■■□□□ 1.61
SRM-202ENST00000459997 USP17L20D6RJB6 530 aa25.12■■□□□ 1.61
SRM-202ENST00000459997 VCAM1P19320 739 aa25.12■■□□□ 1.61
SRM-202ENST00000459997 USP17L24Q0WX57 530 aa25.12■■□□□ 1.61
SRM-202ENST00000459997 C12orf60Q5U649 245 aa25.12■■□□□ 1.61
SRM-202ENST00000459997 NKX2-3Q8TAU0 364 aa25.12■■□□□ 1.61
SRM-202ENST00000459997 PAGR1Q9BTK6 254 aa25.12■■□□□ 1.61
SRM-202ENST00000459997 UNC93B1Q9H1C4 597 aa25.12■■□□□ 1.61
SRM-202ENST00000459997 DOCK3Q8IZD9 2030 aa25.12■■□□□ 1.61
SRM-202ENST00000459997 TTC41PQ6P2S7 1318 aa25.12■■□□□ 1.61
SRM-202ENST00000459997 GJB1P08034 283 aa25.11■■□□□ 1.61
SRM-202ENST00000459997 TMEM179Q6ZVK1 233 aa25.11■■□□□ 1.61
SRM-202ENST00000459997 SHISA4Q96DD7 197 aa25.11■■□□□ 1.61
SRM-202ENST00000459997 SMIM22K7EJ46 135 aa25.1■■□□□ 1.61
SRM-202ENST00000459997 GJA8P48165 433 aa25.1■■□□□ 1.61
SRM-202ENST00000459997 ERVK-9P63128 1117 aa25.1■■□□□ 1.61
SRM-202ENST00000459997 ERVK-24P63145 666 aa25.1■■□□□ 1.61
SRM-202ENST00000459997 CATSPERGQ6ZRH7 1159 aa25.1■■□□□ 1.61
SRM-202ENST00000459997 OTUD7AQ8TE49 926 aaPredicted RBP25.1■■□□□ 1.61
SRM-202ENST00000459997 STRBPQ96SI9 672 aaKnown RBP25.1■■□□□ 1.61
SRM-202ENST00000459997 GJD2Q9UKL4 321 aa25.1■■□□□ 1.61
SRM-202ENST00000459997 PLXNB2O15031 1838 aa25.09■■□□□ 1.61
SRM-202ENST00000459997 A0A1W2PRG0 241 aa25.09■■□□□ 1.61
SRM-202ENST00000459997 RNF113AO15541 343 aaKnown RBP25.09■■□□□ 1.61
SRM-202ENST00000459997 AKR1B1P15121 316 aa25.09■■□□□ 1.61
SRM-202ENST00000459997 CDK8P49336 464 aa25.09■■□□□ 1.61
SRM-202ENST00000459997 CTR9Q6PD62 1173 aa25.09■■□□□ 1.61
SRM-202ENST00000459997 POTEEQ6S8J3 1075 aa25.09■■□□□ 1.61
SRM-202ENST00000459997 CCAR1Q8IX12 1150 aaKnown RBP25.09■■□□□ 1.61
SRM-202ENST00000459997 APPBP2Q92624 585 aa25.09■■□□□ 1.61
SRM-202ENST00000459997 OSBP2Q969R2 916 aa25.09■■□□□ 1.61
SRM-202ENST00000459997 RPAP3Q9H6T3 665 aaPredicted RBP25.09■■□□□ 1.61
SRM-202ENST00000459997 ERC2O15083 957 aa25.08■■□□□ 1.61
SRM-202ENST00000459997 ZFYP08048 801 aaPredicted RBP25.08■■□□□ 1.61
SRM-202ENST00000459997 MAPK4P31152 587 aa25.08■■□□□ 1.61
SRM-202ENST00000459997 Q3C1V9 767 aa25.08■■□□□ 1.61
SRM-202ENST00000459997 C16orf86Q6ZW13 317 aa25.08■■□□□ 1.61
SRM-202ENST00000459997 ARPP21Q9UBL0 812 aaPredicted RBP25.08■■□□□ 1.61
SRM-202ENST00000459997 CLEC10AQ8IUN9 316 aa25.07■■□□□ 1.6
SRM-202ENST00000459997 PI4K2BQ8TCG2 481 aa25.07■■□□□ 1.6
SRM-202ENST00000459997 U2AF1L4Q8WU68 220 aaKnown RBP25.07■■□□□ 1.6
SRM-202ENST00000459997 CCDC17Q96LX7 622 aa25.07■■□□□ 1.6
SRM-202ENST00000459997 PORCNQ9H237 461 aa25.07■■□□□ 1.6
SRM-202ENST00000459997 ZBTB47Q9UFB7 747 aaPredicted RBP25.07■■□□□ 1.6
SRM-202ENST00000459997 RABGAP1Q9Y3P9 1069 aa25.07■■□□□ 1.6
SRM-202ENST00000459997 GLRX3O76003 335 aaKnown RBP25.06■■□□□ 1.6
SRM-202ENST00000459997 HMGCRP04035 888 aa25.06■■□□□ 1.6
SRM-202ENST00000459997 MX1P20591 662 aa25.06■■□□□ 1.6
SRM-202ENST00000459997 ICA1Q05084 483 aa25.06■■□□□ 1.6
SRM-202ENST00000459997 LRRFIP1Q32MZ4 808 aaKnown RBP25.06■■□□□ 1.6
SRM-202ENST00000459997 SOCS4Q8WXH5 440 aa25.06■■□□□ 1.6
SRM-202ENST00000459997 ARHGEF10LQ9HCE6 1279 aa25.06■■□□□ 1.6
SRM-202ENST00000459997 GSG1L2A8MUP6 293 aa25.05■■□□□ 1.6
SRM-202ENST00000459997 CNMDO75829 334 aa25.05■■□□□ 1.6
SRM-202ENST00000459997 NUDT12Q9BQG2 462 aa25.05■■□□□ 1.6
SRM-202ENST00000459997 CWC22Q9HCG8 908 aaKnown RBP25.05■■□□□ 1.6
SRM-202ENST00000459997 M0R2C6 588 aa25.04■■□□□ 1.6
SRM-202ENST00000459997 GPAA1O43292 621 aa25.04■■□□□ 1.6
SRM-202ENST00000459997 CYP2B6P20813 491 aa25.04■■□□□ 1.6
SRM-202ENST00000459997 CCNA1P78396 465 aa25.04■■□□□ 1.6
SRM-202ENST00000459997 ANKRD45Q5TZF3 282 aa25.04■■□□□ 1.6
SRM-202ENST00000459997 GIMAP6Q6P9H5 292 aa25.04■■□□□ 1.6
SRM-202ENST00000459997 LBX2Q6XYB7 198 aa25.04■■□□□ 1.6
SRM-202ENST00000459997 GPR142Q7Z601 462 aa25.04■■□□□ 1.6
SRM-202ENST00000459997 DEFB118Q96PH6 123 aa25.04■■□□□ 1.6
SRM-202ENST00000459997 TANGO6Q9C0B7 1094 aa25.04■■□□□ 1.6
SRM-202ENST00000459997 SPDYE16A6NNV3 312 aaPredicted RBP25.03■■□□□ 1.6
SRM-202ENST00000459997 SGPL1O95470 568 aa25.03■■□□□ 1.6
SRM-202ENST00000459997 SBK1Q52WX2 424 aa25.03■■□□□ 1.6
SRM-202ENST00000459997 PLEKHH3Q7Z736 793 aa25.03■■□□□ 1.6
SRM-202ENST00000459997 SIAH1Q8IUQ4 282 aa25.03■■□□□ 1.6
SRM-202ENST00000459997 FSD1Q9BTV5 496 aa25.03■■□□□ 1.6
SRM-202ENST00000459997 SH2D4AQ9H788 454 aa25.03■■□□□ 1.6
SRM-202ENST00000459997 PAK6Q9NQU5 681 aaPredicted RBP25.03■■□□□ 1.6
SRM-202ENST00000459997 GNAT2P19087 354 aa25.02■■□□□ 1.6
SRM-202ENST00000459997 HDAC1Q13547 482 aaPredicted RBP25.02■■□□□ 1.6
SRM-202ENST00000459997 KIAA1755Q5JYT7 1200 aa25.02■■□□□ 1.6
SRM-202ENST00000459997 TRIB2Q92519 343 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms