RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 ZNF827Q17R98 1081 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 CFAP100Q494V2 611 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 NFXL1Q6ZNB6 911 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 MFSD6Q6ZSS7 791 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 SH3RF1Q7Z6J0 888 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 HOMER1Q86YM7 354 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 FOXP4Q8IVH2 680 aaPredicted RBP7□□□□□ -1.29
UBQLN4-202ENST00000459954 DNAJC10Q8IXB1 793 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 ZNF34Q8IZ26 560 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 FAM177A1Q8N128 213 aaPredicted RBP7□□□□□ -1.29
UBQLN4-202ENST00000459954 STK11IPQ8N1F8 1099 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 CRACR2BQ8N4Y2 399 aaPredicted RBP7□□□□□ -1.29
UBQLN4-202ENST00000459954 GPR161Q8N6U8 529 aaKnown RBP7□□□□□ -1.29
UBQLN4-202ENST00000459954 SPATA5Q8NB90 893 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 UBXN4Q92575 508 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 ARHGEF1Q92888 912 aaKnown RBP7□□□□□ -1.29
UBQLN4-202ENST00000459954 SMARCE1Q969G3 411 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 FERMT2Q96AC1 680 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 GSDMAQ96QA5 445 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 CTAGE1Q96RT6 745 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 GREM2Q9H772 168 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 FANCLQ9NW38 375 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 MYH14Q7Z406 1995 aaKnown RBP7□□□□□ -1.29
UBQLN4-202ENST00000459954 ITIH6Q6UXX5 1313 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 SCN7AQ01118 1682 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 DUOX1Q9NRD9 1551 aa6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 COL5A3P25940 1745 aaPredicted RBP6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 A0A1B0GTH6 734 aa6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 GSG1L2A8MUP6 293 aa6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 POTEB2H3BUK9 544 aa6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 IDH1O75874 414 aaKnown RBP6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 APPP05067 770 aa6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 FGRP09769 529 aa6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 PHKA1P46020 1223 aa6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 TOB1P50616 345 aaPredicted RBP6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 PNOCQ13519 176 aa6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 NAA30Q147X3 362 aaPredicted RBP6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 PARP10Q53GL7 1025 aa6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 SPATA1Q5VX52 437 aa6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 TMCO3Q6UWJ1 677 aa6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 COL23A1Q86Y22 540 aaPredicted RBP6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 DIS3L2Q8IYB7 885 aaKnown RBP6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 MNS1Q8NEH6 495 aa6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 RABGGTAQ92696 567 aa6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 DPF2Q92785 391 aa6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 ERCC4Q92889 916 aaPredicted RBP6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 BAG1Q99933 345 aaPredicted RBP6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 SLC26A6Q9BXS9 759 aa6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 UBXN6Q9BZV1 441 aa6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 PRDM10Q9NQV6 1147 aa6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 RBM28Q9NW13 759 aaKnown RBP6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 MAN1B1Q9UKM7 699 aa6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 PPP2R2CQ9Y2T4 447 aa6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 CD2APQ9Y5K6 639 aa6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 PARP3Q9Y6F1 533 aa6.99□□□□□ -1.29
UBQLN4-202ENST00000459954 QSER1Q2KHR3 1735 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 A0A087WWV3 80 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 VWA3AA6NCI4 1184 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 LRRC10BA6NIK2 292 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 AKR1B15C9JRZ8 316 aaPredicted RBP6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 PRPF3O43395 683 aaKnown RBP6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 ACTN4O43707 911 aaKnown RBP6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 ATP1A3P13637 1013 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 BMP6P22004 513 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 CASQ1P31415 396 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 TRAPPC10P48553 1259 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 CLCN6P51797 869 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 TRIM14Q14142 442 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 SEC23AQ15436 765 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 ERCC6LQ2NKX8 1250 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 ARHGAP29Q52LW3 1261 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 TEX35Q5T0J7 233 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 RSRC2Q7L4I2 434 aaKnown RBP6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 MICU3Q86XE3 530 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 TC2NQ8N9U0 490 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 FANCBQ8NB91 859 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 HNRNPLLQ8WVV9 542 aaKnown RBP6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 PHKBQ93100 1093 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 AIFM3Q96NN9 605 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 SETDB2Q96T68 719 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 CDC5LQ99459 802 aaKnown RBP6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 UTP14AQ9BVJ6 771 aaKnown RBP6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 NYXQ9GZU5 481 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 EPB41L4AQ9HCS5 686 aaPredicted RBP6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 GJB4Q9NTQ9 266 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 INTS13Q9NVM9 706 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 ZNF446Q9NWS9 450 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 RAI14Q9P0K7 980 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 MYO1AQ9UBC5 1043 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 PPP1R1BQ9UD71 204 aaPredicted RBP6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 TRMT112Q9UI30 125 aaKnown RBP6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 WWC3Q9ULE0 1092 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 NFE2L3Q9Y4A8 694 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 MRFAP1Q9Y605 127 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 FHOD1Q9Y613 1164 aa6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 V9GYY5 206 aaPredicted RBP6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 PDS5AQ29RF7 1337 aaKnown RBP6.98□□□□□ -1.29
UBQLN4-202ENST00000459954 TRIM75PA6NK02 468 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 BTBD18B2RXH4 712 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 POLR2DO15514 142 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms