RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 PLCD1P51178 756 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 TUBB2AQ13885 445 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 TTF1Q15361 905 aaPredicted RBP9.68□□□□□ -0.86
VPS50-208ENST00000458707 PTPN21Q16825 1174 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 KANK3Q6NY19 840 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 APTXQ7Z2E3 356 aaKnown RBP9.68□□□□□ -0.86
VPS50-208ENST00000458707 FAM177A1Q8N128 213 aaPredicted RBP9.68□□□□□ -0.86
VPS50-208ENST00000458707 WASF1Q92558 559 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 TUBB2BQ9BVA1 445 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 MRPL44Q9H9J2 332 aaKnown RBP9.68□□□□□ -0.86
VPS50-208ENST00000458707 SENP2Q9HC62 589 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 RAB21Q9UL25 225 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 ITGB4P16144 1822 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 BCL9LQ86UU0 1499 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 MYH1P12882 1939 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 GOLGA8AA7E2F4 631 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 ACTN4O43707 911 aaKnown RBP9.68□□□□□ -0.86
VPS50-208ENST00000458707 MMP1P03956 469 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 IFNAR1P17181 557 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 FECHP22830 423 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 PBX1P40424 430 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 SSRP1Q08945 709 aaKnown RBP9.68□□□□□ -0.86
VPS50-208ENST00000458707 RAD51AP2Q09MP3 1159 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 LONRF2Q1L5Z9 754 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 RILPL1Q5EBL4 403 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 PI16Q6UXB8 463 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 SRGAP1Q7Z6B7 1085 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 MICU3Q86XE3 530 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 PDILTQ8N807 584 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 IQUBQ8NA54 791 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 MSANTD4Q8NCY6 345 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 NEK11Q8NG66 645 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 FOXP1Q9H334 677 aaPredicted RBP9.68□□□□□ -0.86
VPS50-208ENST00000458707 ZBTB3Q9H5J0 574 aa9.68□□□□□ -0.86
VPS50-208ENST00000458707 ZCCHC17Q9NP64 241 aaKnown RBP9.68□□□□□ -0.86
VPS50-208ENST00000458707 NHSL1Q5SYE7 1610 aa9.67□□□□□ -0.86
VPS50-208ENST00000458707 B4E1Z4 1266 aa9.67□□□□□ -0.86
VPS50-208ENST00000458707 ERVV-2B6SEH9 535 aa9.67□□□□□ -0.86
VPS50-208ENST00000458707 AKR1B15C9JRZ8 316 aaPredicted RBP9.67□□□□□ -0.86
VPS50-208ENST00000458707 POLR2DO15514 142 aaKnown RBP9.67□□□□□ -0.86
VPS50-208ENST00000458707 A1BGP04217 495 aa9.67□□□□□ -0.86
VPS50-208ENST00000458707 PCCAP05165 728 aaPredicted RBP9.67□□□□□ -0.86
VPS50-208ENST00000458707 HOXB1P14653 301 aaPredicted RBP9.67□□□□□ -0.86
VPS50-208ENST00000458707 RXRAP19793 462 aa9.67□□□□□ -0.86
VPS50-208ENST00000458707 SATB1Q01826 763 aa9.67□□□□□ -0.86
VPS50-208ENST00000458707 TCIRG1Q13488 830 aa9.67□□□□□ -0.86
VPS50-208ENST00000458707 CERS3Q8IU89 383 aa9.67□□□□□ -0.86
VPS50-208ENST00000458707 CCDC12Q8WUD4 166 aaPredicted RBP9.67□□□□□ -0.86
VPS50-208ENST00000458707 TEX13AQ9BXU3 409 aaPredicted RBP9.67□□□□□ -0.86
VPS50-208ENST00000458707 SERTAD1Q9UHV2 236 aa9.67□□□□□ -0.86
VPS50-208ENST00000458707 CDC23Q9UJX2 597 aa9.67□□□□□ -0.86
VPS50-208ENST00000458707 TBC1D2BQ9UPU7 963 aa9.67□□□□□ -0.86
VPS50-208ENST00000458707 RIPOR2Q9Y4F9 1068 aa9.67□□□□□ -0.86
VPS50-208ENST00000458707 SRPRBQ9Y5M8 271 aaKnown RBP9.67□□□□□ -0.86
VPS50-208ENST00000458707 ADGRG1Q9Y653 693 aa9.67□□□□□ -0.86
VPS50-208ENST00000458707 TCRBV5S4A2TA0A5A2 114 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 BTBD18B2RXH4 712 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 CHMP4BP1P59074 171 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 GRIN1Q05586 938 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 BEND6Q5SZJ8 279 aaPredicted RBP9.66□□□□□ -0.86
VPS50-208ENST00000458707 SLC9C2Q5TAH2 1124 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 RASGRP2Q7LDG7 609 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 CEP112Q8N8E3 955 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 CCDC34Q96HJ3 373 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 AK7Q96M32 723 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 DESI2Q9BSY9 194 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 ANKZF1Q9H8Y5 726 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 SAMSN1Q9NSI8 373 aaKnown RBP9.66□□□□□ -0.86
VPS50-208ENST00000458707 FEZ2Q9UHY8 353 aaPredicted RBP9.66□□□□□ -0.86
VPS50-208ENST00000458707 ADAM21Q9UKJ8 722 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 TNS3Q68CZ2 1445 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 CDHR2Q9BYE9 1310 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 PCDH11XQ9BZA7 1347 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 PCDH11YQ9BZA8 1340 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 SEMA3EO15041 775 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 CSB-PGBD3P0DP91 1061 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 IFIT5Q13325 482 aaKnown RBP9.66□□□□□ -0.86
VPS50-208ENST00000458707 MTF1Q14872 753 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 KARSQ15046 597 aaKnown RBP9.66□□□□□ -0.86
VPS50-208ENST00000458707 SAFBQ15424 915 aaKnown RBP eCLIP9.66□□□□□ -0.86
VPS50-208ENST00000458707 ZSCAN26Q16670 478 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 HSP90AA4PQ58FG1 418 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 TMEM67Q5HYA8 995 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 SPECC1Q5M775 1068 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 CDKAL1Q5VV42 579 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 SPATA1Q5VX52 437 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 RAD9BQ6WBX8 426 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 DIS3L2Q8IYB7 885 aaKnown RBP9.66□□□□□ -0.86
VPS50-208ENST00000458707 TRMT44Q8IYL2 757 aaKnown RBP9.66□□□□□ -0.86
VPS50-208ENST00000458707 VGLL2Q8N8G2 317 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 BANK1Q8NDB2 785 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 GOLGA5Q8TBA6 731 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 MTA3Q9BTC8 594 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 SLC26A6Q9BXS9 759 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 ADD3Q9UEY8 706 aaKnown RBP9.66□□□□□ -0.86
VPS50-208ENST00000458707 SH3BP1Q9Y3L3 701 aa9.66□□□□□ -0.86
VPS50-208ENST00000458707 ITIH6Q6UXX5 1313 aa9.65□□□□□ -0.86
VPS50-208ENST00000458707 ZNF532Q9HCE3 1301 aa9.65□□□□□ -0.86
VPS50-208ENST00000458707 SOWAHDA6NJG2 315 aa9.65□□□□□ -0.86
VPS50-208ENST00000458707 TTC36A6NLP5 189 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms