RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 PAPPA2Q9BXP8 1791 aa10.49□□□□□ -0.73
VPS50-207ENST00000458530 USP17L3A6NCW0 530 aa10.49□□□□□ -0.73
VPS50-207ENST00000458530 USP17L4A6NCW7 530 aa10.49□□□□□ -0.73
VPS50-207ENST00000458530 MINDY4BA8MYZ0 360 aa10.49□□□□□ -0.73
VPS50-207ENST00000458530 GOLGA6L22H0YM25 854 aa10.49□□□□□ -0.73
VPS50-207ENST00000458530 PRKAB2O43741 272 aa10.49□□□□□ -0.73
VPS50-207ENST00000458530 VIL1P09327 827 aaKnown RBP10.49□□□□□ -0.73
VPS50-207ENST00000458530 BTDP43251 543 aa10.49□□□□□ -0.73
VPS50-207ENST00000458530 ZNF280AP59817 542 aaPredicted RBP10.49□□□□□ -0.73
VPS50-207ENST00000458530 HDLBPQ00341 1268 aaKnown RBP10.49□□□□□ -0.73
VPS50-207ENST00000458530 PDE4BQ07343 736 aa10.49□□□□□ -0.73
VPS50-207ENST00000458530 HHIPL2Q6UWX4 724 aa10.49□□□□□ -0.73
VPS50-207ENST00000458530 USP17L1Q7RTZ2 530 aa10.49□□□□□ -0.73
VPS50-207ENST00000458530 TBC1D10CQ8IV04 446 aa10.49□□□□□ -0.73
VPS50-207ENST00000458530 CCDC83Q8IWF9 413 aa10.49□□□□□ -0.73
VPS50-207ENST00000458530 TEX11Q8IYF3 940 aa10.49□□□□□ -0.73
VPS50-207ENST00000458530 ZNF710Q8N1W2 664 aa10.49□□□□□ -0.73
VPS50-207ENST00000458530 TMTC2Q8N394 836 aa10.49□□□□□ -0.73
VPS50-207ENST00000458530 BRF1Q92994 677 aa10.49□□□□□ -0.73
VPS50-207ENST00000458530 TEKT1Q969V4 418 aa10.49□□□□□ -0.73
VPS50-207ENST00000458530 DCPSQ96C86 337 aaKnown RBP10.49□□□□□ -0.73
VPS50-207ENST00000458530 LLPHQ9BRT6 129 aaKnown RBP10.49□□□□□ -0.73
VPS50-207ENST00000458530 MRIQ9BWK5 157 aa10.49□□□□□ -0.73
VPS50-207ENST00000458530 DBNDD1Q9H9R9 158 aa10.49□□□□□ -0.73
VPS50-207ENST00000458530 DCP1AQ9NPI6 582 aaPredicted RBP10.49□□□□□ -0.73
VPS50-207ENST00000458530 KCNQ5Q9NR82 932 aa10.49□□□□□ -0.73
VPS50-207ENST00000458530 TOMM22Q9NS69 142 aa10.49□□□□□ -0.73
VPS50-207ENST00000458530 TPCN1Q9ULQ1 816 aa10.49□□□□□ -0.73
VPS50-207ENST00000458530 ANGEL1Q9UNK9 670 aaKnown RBP10.49□□□□□ -0.73
VPS50-207ENST00000458530 C2orf72A6NCS6 295 aa10.48□□□□□ -0.73
VPS50-207ENST00000458530 FAM205CA6NFA0 338 aa10.48□□□□□ -0.73
VPS50-207ENST00000458530 DDX11L8A8MPP1 907 aa10.48□□□□□ -0.73
VPS50-207ENST00000458530 B4E1Z4 1266 aa10.48□□□□□ -0.73
VPS50-207ENST00000458530 PFKFB2O60825 505 aa10.48□□□□□ -0.73
VPS50-207ENST00000458530 TM4SF4P48230 202 aa10.48□□□□□ -0.73
VPS50-207ENST00000458530 EVCP57679 992 aa10.48□□□□□ -0.73
VPS50-207ENST00000458530 HMGN5P82970 282 aaKnown RBP10.48□□□□□ -0.73
VPS50-207ENST00000458530 DIXDC1Q155Q3 683 aa10.48□□□□□ -0.73
VPS50-207ENST00000458530 ME3Q16798 604 aa10.48□□□□□ -0.73
VPS50-207ENST00000458530 KIF4BQ2VIQ3 1234 aa10.48□□□□□ -0.73
VPS50-207ENST00000458530 CCDC178Q5BJE1 867 aa10.48□□□□□ -0.73
VPS50-207ENST00000458530 FBXO46Q6PJ61 603 aaPredicted RBP10.48□□□□□ -0.73
VPS50-207ENST00000458530 CPLX2Q6PUV4 134 aaKnown RBP10.48□□□□□ -0.73
VPS50-207ENST00000458530 SYNE3Q6ZMZ3 975 aa10.48□□□□□ -0.73
VPS50-207ENST00000458530 IQCA1Q86XH1 822 aa10.48□□□□□ -0.73
VPS50-207ENST00000458530 GTF3C6Q969F1 213 aa10.48□□□□□ -0.73
VPS50-207ENST00000458530 CDCA5Q96FF9 252 aa10.48□□□□□ -0.73
VPS50-207ENST00000458530 TCEANC2Q96MN5 208 aa10.48□□□□□ -0.73
VPS50-207ENST00000458530 UBAC1Q9BSL1 405 aa10.48□□□□□ -0.73
VPS50-207ENST00000458530 NBPF3Q9H094 633 aa10.48□□□□□ -0.73
VPS50-207ENST00000458530 GGA3Q9NZ52 723 aa10.48□□□□□ -0.73
VPS50-207ENST00000458530 NAP1L2Q9ULW6 460 aaPredicted RBP10.48□□□□□ -0.73
VPS50-207ENST00000458530 TTF2Q9UNY4 1162 aaKnown RBP10.48□□□□□ -0.73
VPS50-207ENST00000458530 ASTN2O75129 1339 aaPredicted RBP10.48□□□□□ -0.73
VPS50-207ENST00000458530 NEDD4P46934 1319 aa10.48□□□□□ -0.73
VPS50-207ENST00000458530 ROBO3Q96MS0 1386 aa10.48□□□□□ -0.73
VPS50-207ENST00000458530 MYH15Q9Y2K3 1946 aa10.48□□□□□ -0.73
VPS50-207ENST00000458530 ORC4O43929 436 aa10.47□□□□□ -0.73
VPS50-207ENST00000458530 CDKL5O76039 1030 aa10.47□□□□□ -0.73
VPS50-207ENST00000458530 LIFRP42702 1097 aa10.47□□□□□ -0.73
VPS50-207ENST00000458530 MMP14P50281 582 aa10.47□□□□□ -0.73
VPS50-207ENST00000458530 RCAN1P53805 252 aa10.47□□□□□ -0.73
VPS50-207ENST00000458530 CTDSPL2Q05D32 466 aa10.47□□□□□ -0.73
VPS50-207ENST00000458530 TMEM67Q5HYA8 995 aa10.47□□□□□ -0.73
VPS50-207ENST00000458530 RRP12Q5JTH9 1297 aaKnown RBP10.47□□□□□ -0.73
VPS50-207ENST00000458530 CTR9Q6PD62 1173 aa10.47□□□□□ -0.73
VPS50-207ENST00000458530 SULF1Q8IWU6 871 aa10.47□□□□□ -0.73
VPS50-207ENST00000458530 SH3RF3Q8TEJ3 882 aaPredicted RBP10.47□□□□□ -0.73
VPS50-207ENST00000458530 GMLQ99445 158 aa10.47□□□□□ -0.73
VPS50-207ENST00000458530 MCM9Q9NXL9 1143 aa10.47□□□□□ -0.73
VPS50-207ENST00000458530 DAGLAQ9Y4D2 1042 aa10.47□□□□□ -0.73
VPS50-207ENST00000458530 ATP6V1DQ9Y5K8 247 aa10.47□□□□□ -0.73
VPS50-207ENST00000458530 PITPNM2Q9BZ72 1349 aa10.47□□□□□ -0.73
VPS50-207ENST00000458530 KLF18A0A0U1RQI7 1052 aa10.46□□□□□ -0.73
VPS50-207ENST00000458530 CCDC69A6NI79 296 aa10.46□□□□□ -0.73
VPS50-207ENST00000458530 GOLGA8BA8MQT2 603 aa10.46□□□□□ -0.73
VPS50-207ENST00000458530 USP17L12C9JPN9 530 aa10.46□□□□□ -0.73
VPS50-207ENST00000458530 USP17L21D6R901 530 aa10.46□□□□□ -0.73
VPS50-207ENST00000458530 GPR25O00155 361 aa10.46□□□□□ -0.73
VPS50-207ENST00000458530 SH2B2O14492 632 aaPredicted RBP10.46□□□□□ -0.73
VPS50-207ENST00000458530 IFIT3O14879 490 aaKnown RBP10.46□□□□□ -0.73
VPS50-207ENST00000458530 KDM4AO75164 1064 aa10.46□□□□□ -0.73
VPS50-207ENST00000458530 LARGE1O95461 756 aa10.46□□□□□ -0.73
VPS50-207ENST00000458530 POLR3DP05423 398 aaPredicted RBP10.46□□□□□ -0.73
VPS50-207ENST00000458530 APOBRQ0VD83 1088 aa10.46□□□□□ -0.73
VPS50-207ENST00000458530 WTAPQ15007 396 aa10.46□□□□□ -0.73
VPS50-207ENST00000458530 NFKBIBQ15653 356 aa10.46□□□□□ -0.73
VPS50-207ENST00000458530 NFXL1Q6ZNB6 911 aa10.46□□□□□ -0.73
VPS50-207ENST00000458530 LRRC2Q9BYS8 371 aa10.46□□□□□ -0.73
VPS50-207ENST00000458530 HDAC9Q9UKV0 1011 aa10.46□□□□□ -0.73
VPS50-207ENST00000458530 FLT1P17948 1338 aa10.45□□□□□ -0.74
VPS50-207ENST00000458530 CCDC196A0A1B0GTZ2 297 aa10.45□□□□□ -0.74
VPS50-207ENST00000458530 CPLX1O14810 134 aa10.45□□□□□ -0.74
VPS50-207ENST00000458530 TBC1D8O95759 1140 aa10.45□□□□□ -0.74
VPS50-207ENST00000458530 FGRP09769 529 aa10.45□□□□□ -0.74
VPS50-207ENST00000458530 GJB2P29033 226 aa10.45□□□□□ -0.74
VPS50-207ENST00000458530 FXR1P51114 621 aaKnown RBP eCLIP10.45□□□□□ -0.74
VPS50-207ENST00000458530 ANTXR2P58335 489 aa10.45□□□□□ -0.74
VPS50-207ENST00000458530 STK3Q13188 491 aa10.45□□□□□ -0.74
VPS50-207ENST00000458530 PPP2R5BQ15173 497 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms