RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 SYCP1Q15431 976 aa18.45■□□□□ 0.54
LSS-205ENST00000457828 PICK1Q9NRD5 415 aa18.45■□□□□ 0.54
LSS-205ENST00000457828 CCT6AP40227 531 aaKnown RBP18.45■□□□□ 0.54
LSS-205ENST00000457828 RRAGBQ5VZM2 374 aa18.45■□□□□ 0.54
LSS-205ENST00000457828 SDR42E1Q8WUS8 393 aa18.45■□□□□ 0.54
LSS-205ENST00000457828 TSPYL1Q9H0U9 437 aa18.45■□□□□ 0.54
LSS-205ENST00000457828 ITSN1Q15811 1721 aa18.45■□□□□ 0.54
LSS-205ENST00000457828 CHRNA5P30532 468 aa18.45■□□□□ 0.54
LSS-205ENST00000457828 DNA2P51530 1060 aa18.45■□□□□ 0.54
LSS-205ENST00000457828 TRIM28Q13263 835 aaKnown RBP18.45■□□□□ 0.54
LSS-205ENST00000457828 HEATR3Q7Z4Q2 680 aa18.45■□□□□ 0.54
LSS-205ENST00000457828 ANKRD7Q92527 254 aa18.45■□□□□ 0.54
LSS-205ENST00000457828 CTAGE9A4FU28 777 aa18.44■□□□□ 0.54
LSS-205ENST00000457828 TCP10L2B9ZVM9 353 aa18.44■□□□□ 0.54
LSS-205ENST00000457828 CTDSPL2Q05D32 466 aa18.44■□□□□ 0.54
LSS-205ENST00000457828 SARM1Q6SZW1 724 aa18.44■□□□□ 0.54
LSS-205ENST00000457828 DIS3L2Q8IYB7 885 aaKnown RBP18.44■□□□□ 0.54
LSS-205ENST00000457828 KCNJ14Q9UNX9 436 aa18.44■□□□□ 0.54
LSS-205ENST00000457828 CERS3Q8IU89 383 aa18.44■□□□□ 0.54
LSS-205ENST00000457828 AKR1B15C9JRZ8 316 aaPredicted RBP18.44■□□□□ 0.54
LSS-205ENST00000457828 CAMTA2O94983 1202 aa18.44■□□□□ 0.54
LSS-205ENST00000457828 CLCN6P51797 869 aa18.44■□□□□ 0.54
LSS-205ENST00000457828 TNIP1Q15025 636 aa18.44■□□□□ 0.54
LSS-205ENST00000457828 SLC15A2Q16348 729 aa18.44■□□□□ 0.54
LSS-205ENST00000457828 IGSF22Q8N9C0 903 aa18.44■□□□□ 0.54
LSS-205ENST00000457828 AIFM3Q96NN9 605 aa18.44■□□□□ 0.54
LSS-205ENST00000457828 GPR108Q9NPR9 543 aa18.44■□□□□ 0.54
LSS-205ENST00000457828 RSPH14Q9UHP6 348 aa18.44■□□□□ 0.54
LSS-205ENST00000457828 COL5A2P05997 1499 aaPredicted RBP18.44■□□□□ 0.54
LSS-205ENST00000457828 CMA1P23946 247 aa18.44■□□□□ 0.54
LSS-205ENST00000457828 TERF2Q15554 542 aa18.44■□□□□ 0.54
LSS-205ENST00000457828 BRIP1Q9BX63 1249 aa18.44■□□□□ 0.54
LSS-205ENST00000457828 CEMIPQ8WUJ3 1361 aa18.43■□□□□ 0.54
LSS-205ENST00000457828 A0A1W2PQ27 194 aa18.43■□□□□ 0.54
LSS-205ENST00000457828 A0A1W2PQ64 194 aa18.43■□□□□ 0.54
LSS-205ENST00000457828 A0A1W2PQD8 194 aa18.43■□□□□ 0.54
LSS-205ENST00000457828 POTEB2H3BUK9 544 aa18.43■□□□□ 0.54
LSS-205ENST00000457828 IQCB1Q15051 598 aa18.43■□□□□ 0.54
LSS-205ENST00000457828 TAOK3Q9H2K8 898 aa18.43■□□□□ 0.54
LSS-205ENST00000457828 BMP2KQ9NSY1 1161 aaPredicted RBP18.43■□□□□ 0.54
LSS-205ENST00000457828 GUCA1BQ9UMX6 200 aa18.43■□□□□ 0.54
LSS-205ENST00000457828 PPP2R2CQ9Y2T4 447 aa18.43■□□□□ 0.54
LSS-205ENST00000457828 CLRN2A0PK11 232 aa18.43■□□□□ 0.54
LSS-205ENST00000457828 SMC1AQ14683 1233 aaKnown RBP18.43■□□□□ 0.54
LSS-205ENST00000457828 RTKN2Q8IZC4 609 aa18.43■□□□□ 0.54
LSS-205ENST00000457828 TANGO6Q9C0B7 1094 aa18.43■□□□□ 0.54
LSS-205ENST00000457828 MINPP1Q9UNW1 487 aa18.43■□□□□ 0.54
LSS-205ENST00000457828 PCDHA5Q9Y5H7 936 aa18.43■□□□□ 0.54
LSS-205ENST00000457828 TRIM75PA6NK02 468 aa18.42■□□□□ 0.54
LSS-205ENST00000457828 BTDP43251 543 aa18.42■□□□□ 0.54
LSS-205ENST00000457828 STAMQ92783 540 aa18.42■□□□□ 0.54
LSS-205ENST00000457828 CENPHQ9H3R5 247 aa18.42■□□□□ 0.54
LSS-205ENST00000457828 ST7Q9NRC1 585 aa18.42■□□□□ 0.54
LSS-205ENST00000457828 MATR3P43243 847 aaKnown RBP eCLIP18.42■□□□□ 0.545e-7■■■□□ 16.8
LSS-205ENST00000457828 A0A0G2JLW4 131 aa18.42■□□□□ 0.54
LSS-205ENST00000457828 TNFAIP1Q13829 316 aa18.42■□□□□ 0.54
LSS-205ENST00000457828 LONRF3Q496Y0 759 aa18.42■□□□□ 0.54
LSS-205ENST00000457828 ZMYM1Q5SVZ6 1142 aa18.42■□□□□ 0.54
LSS-205ENST00000457828 CEP112Q8N8E3 955 aa18.42■□□□□ 0.54
LSS-205ENST00000457828 PRDM4Q9UKN5 801 aa18.42■□□□□ 0.54
LSS-205ENST00000457828 CTIFO43310 598 aaKnown RBP18.42■□□□□ 0.54
LSS-205ENST00000457828 CUTAO60888 179 aa18.41■□□□□ 0.54
LSS-205ENST00000457828 MAP9Q49MG5 647 aa18.41■□□□□ 0.54
LSS-205ENST00000457828 PRR5LQ6MZQ0 368 aa18.41■□□□□ 0.54
LSS-205ENST00000457828 CMTR1Q8N1G2 835 aaKnown RBP18.41■□□□□ 0.54
LSS-205ENST00000457828 ST3GAL1Q11201 340 aa18.41■□□□□ 0.54
LSS-205ENST00000457828 POSTNQ15063 836 aa18.41■□□□□ 0.54
LSS-205ENST00000457828 SPECC1LQ69YQ0 1117 aa18.41■□□□□ 0.54
LSS-205ENST00000457828 CAPZA3Q96KX2 299 aa18.41■□□□□ 0.54
LSS-205ENST00000457828 JADE2Q9NQC1 790 aa18.41■□□□□ 0.54
LSS-205ENST00000457828 MAPK8IP1Q9UQF2 711 aa18.41■□□□□ 0.54
LSS-205ENST00000457828 STOX1Q6ZVD7 989 aa18.4■□□□□ 0.54
LSS-205ENST00000457828 SERTAD1Q9UHV2 236 aa18.4■□□□□ 0.54
LSS-205ENST00000457828 NAPAP54920 295 aa18.4■□□□□ 0.54
LSS-205ENST00000457828 CTR9Q6PD62 1173 aa18.4■□□□□ 0.54
LSS-205ENST00000457828 SULF1Q8IWU6 871 aa18.4■□□□□ 0.54
LSS-205ENST00000457828 OSBP2Q969R2 916 aa18.4■□□□□ 0.54
LSS-205ENST00000457828 VPS16Q9H269 839 aa18.4■□□□□ 0.54
LSS-205ENST00000457828 GPCPD1Q9NPB8 672 aa18.4■□□□□ 0.54
LSS-205ENST00000457828 M0R2C6 588 aa18.4■□□□□ 0.54
LSS-205ENST00000457828 IBSPP21815 317 aaPredicted RBP18.4■□□□□ 0.54
LSS-205ENST00000457828 DHX40Q8IX18 779 aaKnown RBP18.4■□□□□ 0.54
LSS-205ENST00000457828 hCG_1642624A0A1W2PR95 340 aa18.4■□□□□ 0.54
LSS-205ENST00000457828 PATL2C9JE40 543 aaKnown RBP18.4■□□□□ 0.54
LSS-205ENST00000457828 DRC1Q96MC2 740 aa18.4■□□□□ 0.54
LSS-205ENST00000457828 CTAGE1Q96RT6 745 aa18.4■□□□□ 0.54
LSS-205ENST00000457828 EHMT1Q9H9B1 1298 aa18.4■□□□□ 0.54
LSS-205ENST00000457828 CDHR2Q9BYE9 1310 aa18.39■□□□□ 0.54
LSS-205ENST00000457828 CALM1P0DP23 149 aa18.39■□□□□ 0.53
LSS-205ENST00000457828 CALM2P0DP24 149 aa18.39■□□□□ 0.53
LSS-205ENST00000457828 CALM3P0DP25 149 aa18.39■□□□□ 0.53
LSS-205ENST00000457828 TFAP4Q01664 338 aa18.39■□□□□ 0.53
LSS-205ENST00000457828 DIXDC1Q155Q3 683 aa18.39■□□□□ 0.53
LSS-205ENST00000457828 POLR3EQ9NVU0 708 aa18.39■□□□□ 0.53
LSS-205ENST00000457828 USP42Q9H9J4 1324 aaKnown RBP18.39■□□□□ 0.53
LSS-205ENST00000457828 EPC1Q9H2F5 836 aa18.39■□□□□ 0.53
LSS-205ENST00000457828 EFCAB8A8MWE9 144 aa18.39■□□□□ 0.53
LSS-205ENST00000457828 SPA17Q15506 151 aa18.39■□□□□ 0.53
LSS-205ENST00000457828 FAM47AQ5JRC9 791 aa18.39■□□□□ 0.53
LSS-205ENST00000457828 SH2D4AQ9H788 454 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms