RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 NTRK3Q16288 839 aa10.27□□□□□ -0.77
RIF1-208ENST00000457745 C9orf131Q5VYM1 1079 aa10.27□□□□□ -0.77
RIF1-208ENST00000457745 OTUD7BQ6GQQ9 843 aa10.27□□□□□ -0.77
RIF1-208ENST00000457745 SGMS1Q86VZ5 419 aa10.27□□□□□ -0.77
RIF1-208ENST00000457745 MICU3Q86XE3 530 aa10.27□□□□□ -0.77
RIF1-208ENST00000457745 MTMR14Q8NCE2 650 aa10.27□□□□□ -0.77
RIF1-208ENST00000457745 JDP2Q8WYK2 163 aa10.27□□□□□ -0.77
RIF1-208ENST00000457745 TNPO1Q92973 898 aaKnown RBP10.27□□□□□ -0.77
RIF1-208ENST00000457745 TMEM87BQ96K49 555 aa10.27□□□□□ -0.77
RIF1-208ENST00000457745 ZSCAN10Q96SZ4 725 aaPredicted RBP10.27□□□□□ -0.77
RIF1-208ENST00000457745 TMEM39BQ9GZU3 492 aa10.27□□□□□ -0.77
RIF1-208ENST00000457745 CNNM2Q9H8M5 875 aa10.27□□□□□ -0.77
RIF1-208ENST00000457745 MYOZ2Q9NPC6 264 aa10.27□□□□□ -0.77
RIF1-208ENST00000457745 SH2B1Q9NRF2 756 aaPredicted RBP10.27□□□□□ -0.77
RIF1-208ENST00000457745 RNF181Q9P0P0 153 aa10.27□□□□□ -0.77
RIF1-208ENST00000457745 NAP1L2Q9ULW6 460 aaPredicted RBP10.27□□□□□ -0.77
RIF1-208ENST00000457745 NID2Q14112 1375 aa10.26□□□□□ -0.77
RIF1-208ENST00000457745 SSC5DA1L4H1 1573 aa10.26□□□□□ -0.77
RIF1-208ENST00000457745 COL2A1P02458 1487 aaPredicted RBP10.26□□□□□ -0.77
RIF1-208ENST00000457745 STK25O00506 426 aa10.26□□□□□ -0.77
RIF1-208ENST00000457745 PLEKHA8P1O95397 391 aa10.26□□□□□ -0.77
RIF1-208ENST00000457745 BRD1O95696 1058 aa10.26□□□□□ -0.77
RIF1-208ENST00000457745 FGD1P98174 961 aa10.26□□□□□ -0.77
RIF1-208ENST00000457745 TRDNQ13061 729 aa10.26□□□□□ -0.77
RIF1-208ENST00000457745 WTAPQ15007 396 aa10.26□□□□□ -0.77
RIF1-208ENST00000457745 ANKRD1Q15327 319 aa10.26□□□□□ -0.77
RIF1-208ENST00000457745 DLGAP5Q15398 846 aa10.26□□□□□ -0.77
RIF1-208ENST00000457745 ZNF654Q8IZM8 581 aa10.26□□□□□ -0.77
RIF1-208ENST00000457745 ESR2Q92731 530 aa10.26□□□□□ -0.77
RIF1-208ENST00000457745 ZNF274Q96GC6 653 aaPredicted RBP10.26□□□□□ -0.77
RIF1-208ENST00000457745 TEPSINQ96N21 525 aa10.26□□□□□ -0.77
RIF1-208ENST00000457745 RNF41Q9H4P4 317 aaPredicted RBP10.26□□□□□ -0.77
RIF1-208ENST00000457745 CNOT7Q9UIV1 285 aaKnown RBP10.26□□□□□ -0.77
RIF1-208ENST00000457745 MTMR6Q9Y217 621 aa10.26□□□□□ -0.77
RIF1-208ENST00000457745 PLIN4Q96Q06 1357 aa10.26□□□□□ -0.77
RIF1-208ENST00000457745 MYH15Q9Y2K3 1946 aa10.25□□□□□ -0.77
RIF1-208ENST00000457745 MYH4Q9Y623 1939 aa10.25□□□□□ -0.77
RIF1-208ENST00000457745 BAZ2BQ9UIF8 2168 aaKnown RBP10.25□□□□□ -0.77
RIF1-208ENST00000457745 PAPPA2Q9BXP8 1791 aa10.25□□□□□ -0.77
RIF1-208ENST00000457745 ADAMTS3O15072 1205 aa10.25□□□□□ -0.77
RIF1-208ENST00000457745 GDF11O95390 407 aa10.25□□□□□ -0.77
RIF1-208ENST00000457745 HSP90AA1P07900 732 aaKnown RBP10.25□□□□□ -0.77
RIF1-208ENST00000457745 VEGFAP15692 232 aaPredicted RBP10.25□□□□□ -0.77
RIF1-208ENST00000457745 SYT1P21579 422 aa10.25□□□□□ -0.77
RIF1-208ENST00000457745 LIFRP42702 1097 aa10.25□□□□□ -0.77
RIF1-208ENST00000457745 FUT2Q10981 343 aa10.25□□□□□ -0.77
RIF1-208ENST00000457745 IER5LQ5T953 404 aa10.25□□□□□ -0.77
RIF1-208ENST00000457745 PRAMEF18Q5VWM3 479 aa10.25□□□□□ -0.77
RIF1-208ENST00000457745 CDC37L1Q7L3B6 337 aa10.25□□□□□ -0.77
RIF1-208ENST00000457745 NBPF11Q86T75 865 aa10.25□□□□□ -0.77
RIF1-208ENST00000457745 CCDC84Q86UT8 332 aaPredicted RBP10.25□□□□□ -0.77
RIF1-208ENST00000457745 SIAH1Q8IUQ4 282 aa10.25□□□□□ -0.77
RIF1-208ENST00000457745 NEDD1Q8NHV4 660 aa10.25□□□□□ -0.77
RIF1-208ENST00000457745 PHKBQ93100 1093 aa10.25□□□□□ -0.77
RIF1-208ENST00000457745 CPVLQ9H3G5 476 aa10.25□□□□□ -0.77
RIF1-208ENST00000457745 VEZTQ9HBM0 779 aa10.25□□□□□ -0.77
RIF1-208ENST00000457745 FZD1Q9UP38 647 aa10.25□□□□□ -0.77
RIF1-208ENST00000457745 ATAD5Q96QE3 1844 aa10.25□□□□□ -0.77
RIF1-208ENST00000457745 MYH6P13533 1939 aa10.25□□□□□ -0.77
RIF1-208ENST00000457745 TCHHQ07283 1943 aa10.25□□□□□ -0.77
RIF1-208ENST00000457745 hCG_1642624A0A1W2PR95 340 aa10.24□□□□□ -0.77
RIF1-208ENST00000457745 TSPY2A6NKD2 308 aa10.24□□□□□ -0.77
RIF1-208ENST00000457745 GOLGA8AA7E2F4 631 aa10.24□□□□□ -0.77
RIF1-208ENST00000457745 SOCS7O14512 581 aa10.24□□□□□ -0.77
RIF1-208ENST00000457745 ENTPD3O75355 529 aa10.24□□□□□ -0.77
RIF1-208ENST00000457745 NOVP48745 357 aa10.24□□□□□ -0.77
RIF1-208ENST00000457745 EIF6P56537 245 aaKnown RBP10.24□□□□□ -0.77
RIF1-208ENST00000457745 TROAPQ12815 778 aa10.24□□□□□ -0.77
RIF1-208ENST00000457745 TNIP1Q15025 636 aa10.24□□□□□ -0.77
RIF1-208ENST00000457745 KIF4BQ2VIQ3 1234 aa10.24□□□□□ -0.77
RIF1-208ENST00000457745 FAM173BQ6P4H8 233 aa10.24□□□□□ -0.77
RIF1-208ENST00000457745 METTL16Q86W50 562 aaKnown RBP10.24□□□□□ -0.77
RIF1-208ENST00000457745 CERS3Q8IU89 383 aa10.24□□□□□ -0.77
RIF1-208ENST00000457745 STAG2Q8N3U4 1231 aa10.24□□□□□ -0.77
RIF1-208ENST00000457745 CEP95Q96GE4 821 aa10.24□□□□□ -0.77
RIF1-208ENST00000457745 TMEM47Q9BQJ4 181 aa10.24□□□□□ -0.77
RIF1-208ENST00000457745 EHD4Q9H223 541 aa10.24□□□□□ -0.77
RIF1-208ENST00000457745 GPRC5DQ9NZD1 345 aa10.24□□□□□ -0.77
RIF1-208ENST00000457745 SMC3Q9UQE7 1217 aa10.24□□□□□ -0.77
RIF1-208ENST00000457745 STK24Q9Y6E0 443 aa10.24□□□□□ -0.77
RIF1-208ENST00000457745 ZBTB43O43298 467 aa10.23□□□□□ -0.77
RIF1-208ENST00000457745 RPS12P25398 132 aaKnown RBP10.23□□□□□ -0.77
RIF1-208ENST00000457745 METAP2P50579 478 aaKnown RBP eCLIP10.23□□□□□ -0.77
RIF1-208ENST00000457745 GUCY1B3Q02153 619 aa10.23□□□□□ -0.77
RIF1-208ENST00000457745 PDE4BQ07343 736 aa10.23□□□□□ -0.77
RIF1-208ENST00000457745 NFKBIBQ15653 356 aa10.23□□□□□ -0.77
RIF1-208ENST00000457745 KIAA1755Q5JYT7 1200 aa10.23□□□□□ -0.77
RIF1-208ENST00000457745 TATDN1Q6P1N9 297 aa10.23□□□□□ -0.77
RIF1-208ENST00000457745 NFXL1Q6ZNB6 911 aa10.23□□□□□ -0.77
RIF1-208ENST00000457745 LRRC47Q8N1G4 583 aaKnown RBP10.23□□□□□ -0.77
RIF1-208ENST00000457745 NUP133Q8WUM0 1156 aa10.23□□□□□ -0.77
RIF1-208ENST00000457745 FAM151AQ8WW52 585 aa10.23□□□□□ -0.77
RIF1-208ENST00000457745 ANKS1AQ92625 1134 aa10.23□□□□□ -0.77
RIF1-208ENST00000457745 DPF2Q92785 391 aa10.23□□□□□ -0.77
RIF1-208ENST00000457745 UBAC1Q9BSL1 405 aa10.23□□□□□ -0.77
RIF1-208ENST00000457745 MKNK2Q9HBH9 465 aa10.23□□□□□ -0.77
RIF1-208ENST00000457745 SERPINB13Q9UIV8 391 aa10.23□□□□□ -0.77
RIF1-208ENST00000457745 HACL1Q9UJ83 578 aa10.23□□□□□ -0.77
RIF1-208ENST00000457745 HDAC9Q9UKV0 1011 aa10.23□□□□□ -0.77
RIF1-208ENST00000457745 POTEFA5A3E0 1075 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms