RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 CYP21A2P08686 494 aa16.76■□□□□ 0.27
SMPD4-215ENST00000457039 SH3D19Q5HYK7 790 aa16.76■□□□□ 0.27
SMPD4-215ENST00000457039 IFNL1Q8IU54 200 aa16.76■□□□□ 0.27
SMPD4-215ENST00000457039 NEDD1Q8NHV4 660 aa16.76■□□□□ 0.27
SMPD4-215ENST00000457039 NKX2-3Q8TAU0 364 aa16.76■□□□□ 0.27
SMPD4-215ENST00000457039 ACER1Q8TDN7 264 aa16.76■□□□□ 0.27
SMPD4-215ENST00000457039 NEDD4P46934 1319 aa16.75■□□□□ 0.27
SMPD4-215ENST00000457039 A0A1W2PRG0 241 aa16.75■□□□□ 0.27
SMPD4-215ENST00000457039 BACE1P56817 501 aa16.75■□□□□ 0.27
SMPD4-215ENST00000457039 TFAP4Q01664 338 aa16.75■□□□□ 0.27
SMPD4-215ENST00000457039 MTMR2Q13614 643 aa16.75■□□□□ 0.27
SMPD4-215ENST00000457039 FAM47AQ5JRC9 791 aa16.75■□□□□ 0.27
SMPD4-215ENST00000457039 MFSD6Q6ZSS7 791 aa16.75■□□□□ 0.27
SMPD4-215ENST00000457039 CLEC10AQ8IUN9 316 aa16.75■□□□□ 0.27
SMPD4-215ENST00000457039 RNF41Q9H4P4 317 aaPredicted RBP16.75■□□□□ 0.27
SMPD4-215ENST00000457039 KANSL2Q9H9L4 492 aa16.75■□□□□ 0.27
SMPD4-215ENST00000457039 TAF6LQ9Y6J9 622 aa16.75■□□□□ 0.27
SMPD4-215ENST00000457039 LOC285556D6RIA3 1793 aa16.74■□□□□ 0.27
SMPD4-215ENST00000457039 C19orf81C9J6K1 198 aa16.74■□□□□ 0.27
SMPD4-215ENST00000457039 BTBD19C9JJ37 291 aa16.74■□□□□ 0.27
SMPD4-215ENST00000457039 USP17L10C9JJH3 530 aa16.74■□□□□ 0.27
SMPD4-215ENST00000457039 ICA1Q05084 483 aa16.74■□□□□ 0.27
SMPD4-215ENST00000457039 DGKZQ13574 1117 aa16.74■□□□□ 0.27
SMPD4-215ENST00000457039 NECTIN1Q15223 517 aa16.74■□□□□ 0.27
SMPD4-215ENST00000457039 GPAT2Q6NUI2 795 aa16.74■□□□□ 0.27
SMPD4-215ENST00000457039 FAM43AQ8N2R8 423 aa16.74■□□□□ 0.27
SMPD4-215ENST00000457039 KIAA1683Q9H0B3 1180 aa16.74■□□□□ 0.27
SMPD4-215ENST00000457039 RANBP6O60518 1105 aaKnown RBP16.73■□□□□ 0.27
SMPD4-215ENST00000457039 TSPY3P0CV98 308 aa16.73■□□□□ 0.27
SMPD4-215ENST00000457039 TSPY8P0CW00 308 aa16.73■□□□□ 0.27
SMPD4-215ENST00000457039 NOVP48745 357 aa16.73■□□□□ 0.27
SMPD4-215ENST00000457039 NT5C2P49902 561 aa16.73■□□□□ 0.27
SMPD4-215ENST00000457039 HMGCS2P54868 508 aa16.73■□□□□ 0.27
SMPD4-215ENST00000457039 FASTKD5Q7L8L6 764 aaKnown RBP16.73■□□□□ 0.27
SMPD4-215ENST00000457039 ANKRD23Q86SG2 305 aa16.73■□□□□ 0.27
SMPD4-215ENST00000457039 PROCA1Q8NCQ7 364 aaPredicted RBP16.73■□□□□ 0.27
SMPD4-215ENST00000457039 C12orf42Q96LP6 360 aa16.73■□□□□ 0.27
SMPD4-215ENST00000457039 ZCCHC17Q9NP64 241 aaKnown RBP16.73■□□□□ 0.27
SMPD4-215ENST00000457039 IL17RBQ9NRM6 502 aa16.73■□□□□ 0.27
SMPD4-215ENST00000457039 EMILIN3Q9NT22 766 aa16.73■□□□□ 0.27
SMPD4-215ENST00000457039 RNF186Q9NXI6 227 aa16.73■□□□□ 0.27
SMPD4-215ENST00000457039 NYAP2Q9P242 653 aa16.73■□□□□ 0.27
SMPD4-215ENST00000457039 TSPY2A6NKD2 308 aa16.72■□□□□ 0.27
SMPD4-215ENST00000457039 EEF2P13639 858 aaKnown RBP16.72■□□□□ 0.27
SMPD4-215ENST00000457039 RRP12Q5JTH9 1297 aaKnown RBP16.72■□□□□ 0.27
SMPD4-215ENST00000457039 USP17L2Q6R6M4 530 aa16.72■□□□□ 0.27
SMPD4-215ENST00000457039 STOX1Q6ZVD7 989 aa16.72■□□□□ 0.27
SMPD4-215ENST00000457039 CEP95Q96GE4 821 aa16.72■□□□□ 0.27
SMPD4-215ENST00000457039 CFHR5Q9BXR6 569 aa16.72■□□□□ 0.27
SMPD4-215ENST00000457039 SAGE1Q9NXZ1 904 aa16.72■□□□□ 0.27
SMPD4-215ENST00000457039 MTMR4Q9NYA4 1195 aa16.72■□□□□ 0.27
SMPD4-215ENST00000457039 TMX2Q9Y320 296 aa16.72■□□□□ 0.27
SMPD4-215ENST00000457039 SLC27A2O14975 620 aa16.71■□□□□ 0.27
SMPD4-215ENST00000457039 ALDH1A1P00352 501 aa16.71■□□□□ 0.27
SMPD4-215ENST00000457039 HSPA1AP0DMV8 641 aaKnown RBP16.71■□□□□ 0.27
SMPD4-215ENST00000457039 HSPA1BP0DMV9 641 aaKnown RBP16.71■□□□□ 0.27
SMPD4-215ENST00000457039 USP14P54578 494 aa16.71■□□□□ 0.27
SMPD4-215ENST00000457039 TREML2Q5T2D2 321 aa16.71■□□□□ 0.27
SMPD4-215ENST00000457039 CREB3L3Q68CJ9 461 aa16.71■□□□□ 0.27
SMPD4-215ENST00000457039 OTUD7BQ6GQQ9 843 aa16.71■□□□□ 0.27
SMPD4-215ENST00000457039 ESR2Q92731 530 aa16.71■□□□□ 0.27
SMPD4-215ENST00000457039 MKL1Q969V6 931 aa16.71■□□□□ 0.27
SMPD4-215ENST00000457039 ARHGEF10LQ9HCE6 1279 aa16.71■□□□□ 0.27
SMPD4-215ENST00000457039 TOMM22Q9NS69 142 aa16.71■□□□□ 0.27
SMPD4-215ENST00000457039 TCP11L1Q9NUJ3 509 aa16.71■□□□□ 0.27
SMPD4-215ENST00000457039 AGTPBP1Q9UPW5 1226 aa16.71■□□□□ 0.27
SMPD4-215ENST00000457039 SLC45A1Q9Y2W3 748 aa16.71■□□□□ 0.27
SMPD4-215ENST00000457039 B4E1Z4 1266 aa16.7■□□□□ 0.26
SMPD4-215ENST00000457039 E7EWF7 191 aa16.7■□□□□ 0.26
SMPD4-215ENST00000457039 EPB41L2O43491 1005 aaKnown RBP16.7■□□□□ 0.26
SMPD4-215ENST00000457039 CA12O43570 354 aa16.7■□□□□ 0.26
SMPD4-215ENST00000457039 NMT2O60551 498 aa16.7■□□□□ 0.26
SMPD4-215ENST00000457039 TRPA1O75762 1119 aa16.7■□□□□ 0.26
SMPD4-215ENST00000457039 REC8O95072 547 aa16.7■□□□□ 0.26
SMPD4-215ENST00000457039 GADL1Q6ZQY3 521 aa16.7■□□□□ 0.26
SMPD4-215ENST00000457039 FEZ1Q99689 392 aa16.7■□□□□ 0.26
SMPD4-215ENST00000457039 KRT23Q9C075 422 aa16.7■□□□□ 0.26
SMPD4-215ENST00000457039 CNNM2Q9H8M5 875 aa16.7■□□□□ 0.26
SMPD4-215ENST00000457039 PDHXO00330 501 aa16.69■□□□□ 0.26
SMPD4-215ENST00000457039 KDM4AO75164 1064 aa16.69■□□□□ 0.26
SMPD4-215ENST00000457039 TTLL1O95922 423 aa16.69■□□□□ 0.26
SMPD4-215ENST00000457039 ZYXQ15942 572 aaKnown RBP16.69■□□□□ 0.26
SMPD4-215ENST00000457039 KIAA1755Q5JYT7 1200 aa16.69■□□□□ 0.26
SMPD4-215ENST00000457039 KCNB2Q92953 911 aa16.69■□□□□ 0.26
SMPD4-215ENST00000457039 BEGAINQ9BUH8 593 aa16.69■□□□□ 0.26
SMPD4-215ENST00000457039 SH2D4AQ9H788 454 aa16.69■□□□□ 0.26
SMPD4-215ENST00000457039 VCPKMTQ9H867 229 aa16.69■□□□□ 0.26
SMPD4-215ENST00000457039 TMOD4Q9NZQ9 345 aa16.69■□□□□ 0.26
SMPD4-215ENST00000457039 CLIP2Q9UDT6 1046 aa16.69■□□□□ 0.26
SMPD4-215ENST00000457039 SYNPO2Q9UMS6 1093 aa16.69■□□□□ 0.26
SMPD4-215ENST00000457039 FOXN1O15353 648 aa16.68■□□□□ 0.26
SMPD4-215ENST00000457039 VCAM1P19320 739 aa16.68■□□□□ 0.26
SMPD4-215ENST00000457039 HOXA7P31268 230 aaPredicted RBP16.68■□□□□ 0.26
SMPD4-215ENST00000457039 HSPA4P34932 840 aa16.68■□□□□ 0.26
SMPD4-215ENST00000457039 ATP2B2Q01814 1243 aa16.68■□□□□ 0.26
SMPD4-215ENST00000457039 TSGA10IPQ3SY00 556 aa16.68■□□□□ 0.26
SMPD4-215ENST00000457039 PPP4R3BQ5MIZ7 849 aa16.68■□□□□ 0.26
SMPD4-215ENST00000457039 RCSD1Q6JBY9 416 aa16.68■□□□□ 0.26
SMPD4-215ENST00000457039 USP26Q9BXU7 913 aa16.68■□□□□ 0.26
SMPD4-215ENST00000457039 R3HDMLQ9H3Y0 253 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms