RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 CTR9Q6PD62 1173 aa14.24□□□□□ -0.13
LINC00959-201ENST00000456581 METTL16Q86W50 562 aaKnown RBP14.24□□□□□ -0.13
LINC00959-201ENST00000456581 IARSP41252 1262 aaKnown RBP14.23□□□□□ -0.13
LINC00959-201ENST00000456581 LIFRP42702 1097 aa14.23□□□□□ -0.13
LINC00959-201ENST00000456581 GYS2P54840 703 aa14.23□□□□□ -0.13
LINC00959-201ENST00000456581 UBASH3AP57075 661 aa14.23□□□□□ -0.13
LINC00959-201ENST00000456581 GPSM2P81274 684 aa14.23□□□□□ -0.13
LINC00959-201ENST00000456581 ARHGAP29Q52LW3 1261 aa14.23□□□□□ -0.13
LINC00959-201ENST00000456581 KRT222Q8N1A0 295 aa14.23□□□□□ -0.13
LINC00959-201ENST00000456581 CNNM2Q9H8M5 875 aa14.23□□□□□ -0.13
LINC00959-201ENST00000456581 INTS13Q9NVM9 706 aa14.23□□□□□ -0.13
LINC00959-201ENST00000456581 FHOD1Q9Y613 1164 aa14.23□□□□□ -0.13
LINC00959-201ENST00000456581 RGPD3A6NKT7 1758 aaPredicted RBP14.23□□□□□ -0.13
LINC00959-201ENST00000456581 RGPD4Q7Z3J3 1758 aa14.23□□□□□ -0.13
LINC00959-201ENST00000456581 RGL2O15211 777 aa14.23□□□□□ -0.13
LINC00959-201ENST00000456581 POLR3GO15318 223 aaPredicted RBP14.23□□□□□ -0.13
LINC00959-201ENST00000456581 FAM47AQ5JRC9 791 aa14.23□□□□□ -0.13
LINC00959-201ENST00000456581 ATL3Q6DD88 541 aa14.23□□□□□ -0.13
LINC00959-201ENST00000456581 OLFM4Q6UX06 510 aa14.23□□□□□ -0.13
LINC00959-201ENST00000456581 IRX2Q9BZI1 471 aaPredicted RBP14.23□□□□□ -0.13
LINC00959-201ENST00000456581 KCNJ14Q9UNX9 436 aa14.23□□□□□ -0.13
LINC00959-201ENST00000456581 BRWD3Q6RI45 1802 aa14.23□□□□□ -0.13
LINC00959-201ENST00000456581 TNKSO95271 1327 aa14.23□□□□□ -0.13
LINC00959-201ENST00000456581 CMA1P23946 247 aa14.23□□□□□ -0.13
LINC00959-201ENST00000456581 SLC39A14Q15043 492 aa14.23□□□□□ -0.13
LINC00959-201ENST00000456581 PDILTQ8N807 584 aa14.23□□□□□ -0.13
LINC00959-201ENST00000456581 RPGRQ92834 1020 aaKnown RBP14.23□□□□□ -0.13
LINC00959-201ENST00000456581 UBR3Q6ZT12 1888 aa14.22□□□□□ -0.13
LINC00959-201ENST00000456581 VGLL3A8MV65 326 aa14.22□□□□□ -0.13
LINC00959-201ENST00000456581 ENAHQ8N8S7 591 aaPredicted RBP14.22□□□□□ -0.13
LINC00959-201ENST00000456581 UBAC1Q9BSL1 405 aa14.22□□□□□ -0.13
LINC00959-201ENST00000456581 DCP1AQ9NPI6 582 aaPredicted RBP14.22□□□□□ -0.13
LINC00959-201ENST00000456581 USP17L8P0C7I0 530 aa14.22□□□□□ -0.13
LINC00959-201ENST00000456581 PRR29P0C7W0 189 aa14.22□□□□□ -0.13
LINC00959-201ENST00000456581 PLA2G4AP47712 749 aa14.22□□□□□ -0.13
LINC00959-201ENST00000456581 ADKP55263 362 aaKnown RBP14.22□□□□□ -0.13
LINC00959-201ENST00000456581 PTPAQ15257 358 aa14.22□□□□□ -0.13
LINC00959-201ENST00000456581 TXNRD1Q16881 649 aa14.22□□□□□ -0.13
LINC00959-201ENST00000456581 CCDC93Q567U6 631 aa14.22□□□□□ -0.13
LINC00959-201ENST00000456581 TRIM65Q6PJ69 517 aa14.22□□□□□ -0.13
LINC00959-201ENST00000456581 ZNF654Q8IZM8 581 aa14.22□□□□□ -0.13
LINC00959-201ENST00000456581 FAM53CQ9NYF3 392 aa14.22□□□□□ -0.13
LINC00959-201ENST00000456581 PCDHA5Q9Y5H7 936 aa14.22□□□□□ -0.13
LINC00959-201ENST00000456581 COBLO75128 1261 aa14.21□□□□□ -0.13
LINC00959-201ENST00000456581 URI1O94763 535 aaPredicted RBP14.21□□□□□ -0.13
LINC00959-201ENST00000456581 BRAPQ7Z569 592 aa14.21□□□□□ -0.13
LINC00959-201ENST00000456581 DZIP1Q86YF9 867 aaKnown RBP14.21□□□□□ -0.13
LINC00959-201ENST00000456581 MAP3K14Q99558 947 aa14.21□□□□□ -0.13
LINC00959-201ENST00000456581 DESI2Q9BSY9 194 aa14.21□□□□□ -0.13
LINC00959-201ENST00000456581 ZSWIM4Q9H7M6 989 aa14.21□□□□□ -0.13
LINC00959-201ENST00000456581 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.21□□□□□ -0.13
LINC00959-201ENST00000456581 UFL1O94874 794 aa14.21□□□□□ -0.14
LINC00959-201ENST00000456581 SEC23AQ15436 765 aa14.21□□□□□ -0.14
LINC00959-201ENST00000456581 RTN1Q16799 776 aa14.21□□□□□ -0.14
LINC00959-201ENST00000456581 CCDC150Q8NCX0 1101 aa14.21□□□□□ -0.14
LINC00959-201ENST00000456581 WDR24Q96S15 920 aa14.21□□□□□ -0.14
LINC00959-201ENST00000456581 CARD6Q9BX69 1037 aa14.21□□□□□ -0.14
LINC00959-201ENST00000456581 IMPACTQ9P2X3 320 aa14.21□□□□□ -0.14
LINC00959-201ENST00000456581 ERICH2A1L162 156 aa14.2□□□□□ -0.14
LINC00959-201ENST00000456581 BTBD18B2RXH4 712 aa14.2□□□□□ -0.14
LINC00959-201ENST00000456581 CASP1P29466 404 aa14.2□□□□□ -0.14
LINC00959-201ENST00000456581 FMR1Q06787 632 aaKnown RBP eCLIP14.2□□□□□ -0.14
LINC00959-201ENST00000456581 SART3Q15020 963 aaKnown RBP14.2□□□□□ -0.14
LINC00959-201ENST00000456581 CPLX2Q6PUV4 134 aaKnown RBP14.2□□□□□ -0.14
LINC00959-201ENST00000456581 USP49Q70CQ1 688 aa14.2□□□□□ -0.14
LINC00959-201ENST00000456581 L2HGDHQ9H9P8 463 aa14.2□□□□□ -0.14
LINC00959-201ENST00000456581 SASH3O75995 380 aa14.2□□□□□ -0.14
LINC00959-201ENST00000456581 H2AFXP16104 143 aaPredicted RBP14.2□□□□□ -0.14
LINC00959-201ENST00000456581 ESR2Q92731 530 aa14.2□□□□□ -0.14
LINC00959-201ENST00000456581 BPIFA3Q9BQP9 254 aa14.2□□□□□ -0.14
LINC00959-201ENST00000456581 RNF41Q9H4P4 317 aaPredicted RBP14.2□□□□□ -0.14
LINC00959-201ENST00000456581 TIAM2Q8IVF5 1701 aa14.2□□□□□ -0.14
LINC00959-201ENST00000456581 SEMA3EO15041 775 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 RXRBP28702 533 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 SSRP1Q08945 709 aaKnown RBP14.19□□□□□ -0.14
LINC00959-201ENST00000456581 MTF1Q14872 753 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 TOGARAM2Q6ZUX3 1019 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 FANCBQ8NB91 859 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 CNNM3Q8NE01 707 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 SH3RF3Q8TEJ3 882 aaPredicted RBP14.19□□□□□ -0.14
LINC00959-201ENST00000456581 SHISA4Q96DD7 197 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 DYNLL2Q96FJ2 89 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 BRIP1Q9BX63 1249 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 MCM9Q9NXL9 1143 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 ANAPC4Q9UJX5 808 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 HPSEQ9Y251 543 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 XDHP47989 1333 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 ECM29Q5VYK3 1845 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 CDKL5O76039 1030 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 PNMA6AP0CW24 399 aaPredicted RBP14.19□□□□□ -0.14
LINC00959-201ENST00000456581 ADRA2BP18089 450 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 ST5P78524 1137 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 MYL5Q02045 173 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 NR5A1Q13285 461 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 REXO1L1PQ8IX06 675 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 POLLQ9UGP5 575 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 KCNH3Q9ULD8 1083 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 POLRMTO00411 1230 aaKnown RBP14.19□□□□□ -0.14
LINC00959-201ENST00000456581 SOCS7O14512 581 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 PLEKHA8P1O95397 391 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms