RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 CRACR2BQ8N4Y2 399 aaPredicted RBP18.81■□□□□ 0.6
TMEM220-202ENST00000455996 NUP133Q8WUM0 1156 aa18.81■□□□□ 0.6
TMEM220-202ENST00000455996 ZNF541Q9H0D2 1346 aa18.8■□□□□ 0.6
TMEM220-202ENST00000455996 GOLGA6L22H0YM25 854 aa18.8■□□□□ 0.6
TMEM220-202ENST00000455996 H3BQV1 296 aa18.8■□□□□ 0.6
TMEM220-202ENST00000455996 AKR1B1P15121 316 aa18.8■□□□□ 0.6
TMEM220-202ENST00000455996 SSRP1Q08945 709 aaKnown RBP18.8■□□□□ 0.6
TMEM220-202ENST00000455996 IFFO2Q5TF58 517 aa18.8■□□□□ 0.6
TMEM220-202ENST00000455996 PNMA1Q8ND90 353 aa18.8■□□□□ 0.6
TMEM220-202ENST00000455996 TMEM47Q9BQJ4 181 aa18.8■□□□□ 0.6
TMEM220-202ENST00000455996 MTMR4Q9NYA4 1195 aa18.8■□□□□ 0.6
TMEM220-202ENST00000455996 GREB1LQ9C091 1923 aaPredicted RBP18.79■□□□□ 0.6
TMEM220-202ENST00000455996 DICER1Q9UPY3 1922 aaKnown RBP18.79■□□□□ 0.6
TMEM220-202ENST00000455996 CLRN2A0PK11 232 aa18.79■□□□□ 0.6
TMEM220-202ENST00000455996 MYO1BO43795 1136 aa18.79■□□□□ 0.6
TMEM220-202ENST00000455996 TOP1P11387 765 aaKnown RBP18.79■□□□□ 0.6
TMEM220-202ENST00000455996 RESTQ13127 1097 aa18.79■□□□□ 0.6
TMEM220-202ENST00000455996 PPP4R3BQ5MIZ7 849 aa18.79■□□□□ 0.6
TMEM220-202ENST00000455996 TMTC3Q6ZXV5 915 aa18.79■□□□□ 0.6
TMEM220-202ENST00000455996 ZSCAN29Q8IWY8 852 aaPredicted RBP18.79■□□□□ 0.6
TMEM220-202ENST00000455996 FBXO18Q8NFZ0 1043 aa18.79■□□□□ 0.6
TMEM220-202ENST00000455996 PHKBQ93100 1093 aa18.79■□□□□ 0.6
TMEM220-202ENST00000455996 CEP95Q96GE4 821 aa18.79■□□□□ 0.6
TMEM220-202ENST00000455996 RNF26Q9BY78 433 aaPredicted RBP18.79■□□□□ 0.6
TMEM220-202ENST00000455996 ZSCAN16Q9H4T2 348 aaPredicted RBP18.79■□□□□ 0.6
TMEM220-202ENST00000455996 PGAP2Q9UHJ9 254 aa18.79■□□□□ 0.6
TMEM220-202ENST00000455996 GOLGB1Q14789 3259 aaKnown RBP18.79■□□□□ 0.6
TMEM220-202ENST00000455996 SHTN1A0MZ66 631 aa18.78■□□□□ 0.6
TMEM220-202ENST00000455996 GRM4Q14833 912 aa18.78■□□□□ 0.6
TMEM220-202ENST00000455996 NBPF9Q3BBW0 867 aa18.78■□□□□ 0.6
TMEM220-202ENST00000455996 MICALL2Q8IY33 904 aa18.78■□□□□ 0.6
TMEM220-202ENST00000455996 CTCFLQ8NI51 663 aaPredicted RBP18.78■□□□□ 0.6
TMEM220-202ENST00000455996 WASF1Q92558 559 aa18.78■□□□□ 0.6
TMEM220-202ENST00000455996 C8orf76Q96K31 380 aa18.78■□□□□ 0.6
TMEM220-202ENST00000455996 HERC5Q9UII4 1024 aaKnown RBP18.78■□□□□ 0.6
TMEM220-202ENST00000455996 CNOT7Q9UIV1 285 aaKnown RBP18.78■□□□□ 0.6
TMEM220-202ENST00000455996 TCP10L2B9ZVM9 353 aa18.77■□□□□ 0.6
TMEM220-202ENST00000455996 PPFIA3O75145 1194 aa18.77■□□□□ 0.6
TMEM220-202ENST00000455996 YBX3P16989 372 aaKnown RBP eCLIP18.77■□□□□ 0.6
TMEM220-202ENST00000455996 KIF5BP33176 963 aa18.77■□□□□ 0.6
TMEM220-202ENST00000455996 MCTP1Q6DN14 999 aa18.77■□□□□ 0.6
TMEM220-202ENST00000455996 TRIM22Q8IYM9 498 aa18.77■□□□□ 0.6
TMEM220-202ENST00000455996 GPC2Q8N158 579 aa18.77■□□□□ 0.6
TMEM220-202ENST00000455996 TMEM87AQ8NBN3 555 aa18.77■□□□□ 0.6
TMEM220-202ENST00000455996 ALG1Q9BT22 464 aa18.77■□□□□ 0.6
TMEM220-202ENST00000455996 SLC26A6Q9BXS9 759 aa18.77■□□□□ 0.6
TMEM220-202ENST00000455996 GJA3Q9Y6H8 435 aa18.77■□□□□ 0.6
TMEM220-202ENST00000455996 PRPF3O43395 683 aaKnown RBP18.76■□□□□ 0.59
TMEM220-202ENST00000455996 TBC1D12O60347 775 aa18.76■□□□□ 0.59
TMEM220-202ENST00000455996 DEXIO95424 95 aa18.76■□□□□ 0.59
TMEM220-202ENST00000455996 GNAQP50148 359 aa18.76■□□□□ 0.59
TMEM220-202ENST00000455996 CHAMP1Q96JM3 812 aa18.76■□□□□ 0.59
TMEM220-202ENST00000455996 CSRNP1Q96S65 589 aa18.76■□□□□ 0.59
TMEM220-202ENST00000455996 LMBRD1Q9NUN5 540 aa18.76■□□□□ 0.59
TMEM220-202ENST00000455996 STX8Q9UNK0 236 aa18.76■□□□□ 0.59
TMEM220-202ENST00000455996 SBF1O95248 1867 aa18.76■□□□□ 0.59
TMEM220-202ENST00000455996 PLEKHA8P1O95397 391 aa18.75■□□□□ 0.59
TMEM220-202ENST00000455996 TTLL1O95922 423 aa18.75■□□□□ 0.59
TMEM220-202ENST00000455996 MAP3K10Q02779 954 aa18.75■□□□□ 0.59
TMEM220-202ENST00000455996 CNTNAP5Q8WYK1 1306 aa18.75■□□□□ 0.59
TMEM220-202ENST00000455996 PALM3A6NDB9 673 aaPredicted RBP18.74■□□□□ 0.59
TMEM220-202ENST00000455996 CERKLQ49MI3 558 aaPredicted RBP18.74■□□□□ 0.59
TMEM220-202ENST00000455996 FERMT3Q86UX7 667 aa18.74■□□□□ 0.59
TMEM220-202ENST00000455996 SRBD1Q8N5C6 995 aaKnown RBP18.74■□□□□ 0.59
TMEM220-202ENST00000455996 MKL1Q969V6 931 aa18.74■□□□□ 0.59
TMEM220-202ENST00000455996 LZTS2Q9BRK4 669 aa18.74■□□□□ 0.59
TMEM220-202ENST00000455996 TRIM34Q9BYJ4 488 aa18.74■□□□□ 0.59
TMEM220-202ENST00000455996 VEZTQ9HBM0 779 aa18.74■□□□□ 0.59
TMEM220-202ENST00000455996 MAD2L2Q9UI95 211 aa18.74■□□□□ 0.59
TMEM220-202ENST00000455996 EGFRP00533 1210 aa18.74■□□□□ 0.59
TMEM220-202ENST00000455996 SLURP2P0DP57 97 aa18.74■□□□□ 0.59
TMEM220-202ENST00000455996 SNHG28P0DPA3 235 aa18.74■□□□□ 0.59
TMEM220-202ENST00000455996 SMARCA1P28370 1054 aa18.74■□□□□ 0.59
TMEM220-202ENST00000455996 GUCY1A2P33402 732 aa18.74■□□□□ 0.59
TMEM220-202ENST00000455996 TNNI2P48788 182 aa18.74■□□□□ 0.59
TMEM220-202ENST00000455996 PKN1Q16512 942 aa18.74■□□□□ 0.59
TMEM220-202ENST00000455996 SKOR2Q2VWA4 1001 aaPredicted RBP18.74■□□□□ 0.59
TMEM220-202ENST00000455996 TMEM179Q6ZVK1 233 aa18.74■□□□□ 0.59
TMEM220-202ENST00000455996 AIFM3Q96NN9 605 aa18.74■□□□□ 0.59
TMEM220-202ENST00000455996 GPRC5DQ9NZD1 345 aa18.74■□□□□ 0.59
TMEM220-202ENST00000455996 RBM27Q9P2N5 1060 aaKnown RBP18.74■□□□□ 0.59
TMEM220-202ENST00000455996 MYH8P13535 1937 aa18.73■□□□□ 0.59
TMEM220-202ENST00000455996 FAM196BA6NMK8 535 aa18.73■□□□□ 0.59
TMEM220-202ENST00000455996 H7C1D1 291 aa18.73■□□□□ 0.59
TMEM220-202ENST00000455996 TRAK2O60296 914 aa18.73■□□□□ 0.59
TMEM220-202ENST00000455996 DNM1Q05193 864 aaKnown RBP18.73■□□□□ 0.59
TMEM220-202ENST00000455996 TNFAIP1Q13829 316 aa18.73■□□□□ 0.59
TMEM220-202ENST00000455996 KIF4BQ2VIQ3 1234 aa18.73■□□□□ 0.59
TMEM220-202ENST00000455996 KRT40Q6A162 431 aa18.73■□□□□ 0.59
TMEM220-202ENST00000455996 ATL3Q6DD88 541 aa18.73■□□□□ 0.59
TMEM220-202ENST00000455996 CMTR1Q8N1G2 835 aaKnown RBP18.73■□□□□ 0.59
TMEM220-202ENST00000455996 KANSL2Q9H9L4 492 aa18.73■□□□□ 0.59
TMEM220-202ENST00000455996 NYAP2Q9P242 653 aa18.73■□□□□ 0.59
TMEM220-202ENST00000455996 UBE2Q2LH0YL09 131 aa18.72■□□□□ 0.59
TMEM220-202ENST00000455996 GUCY1B3Q02153 619 aa18.72■□□□□ 0.59
TMEM220-202ENST00000455996 KIF23Q02241 960 aaPredicted RBP18.72■□□□□ 0.59
TMEM220-202ENST00000455996 OTUD7BQ6GQQ9 843 aa18.72■□□□□ 0.59
TMEM220-202ENST00000455996 SAMD7Q7Z3H4 446 aa18.72■□□□□ 0.59
TMEM220-202ENST00000455996 TMEM39BQ9GZU3 492 aa18.72■□□□□ 0.59
TMEM220-202ENST00000455996 CNPY2Q9Y2B0 182 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms