RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 PPARAQ07869 468 aa16.91■□□□□ 0.3
HDAC4-205ENST00000454542 SEPT2Q15019 361 aa16.91■□□□□ 0.3
HDAC4-205ENST00000454542 GADL1Q6ZQY3 521 aa16.91■□□□□ 0.3
HDAC4-205ENST00000454542 CCDC136Q96JN2 1154 aa16.91■□□□□ 0.3
HDAC4-205ENST00000454542 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.91■□□□□ 0.3
HDAC4-205ENST00000454542 KIAA1683Q9H0B3 1180 aa16.91■□□□□ 0.3
HDAC4-205ENST00000454542 IL25Q9H293 177 aa16.91■□□□□ 0.3
HDAC4-205ENST00000454542 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.91■□□□□ 0.3
HDAC4-205ENST00000454542 PARP14Q460N5 1801 aa16.91■□□□□ 0.3
HDAC4-205ENST00000454542 MINDY4BA8MYZ0 360 aa16.9■□□□□ 0.3
HDAC4-205ENST00000454542 BCRP11274 1271 aa16.9■□□□□ 0.3
HDAC4-205ENST00000454542 MFAP1P55081 439 aaKnown RBP16.9■□□□□ 0.3
HDAC4-205ENST00000454542 RAB3GAP1Q15042 981 aa16.9■□□□□ 0.3
HDAC4-205ENST00000454542 C17orf99Q6UX52 265 aa16.9■□□□□ 0.3
HDAC4-205ENST00000454542 ACER1Q8TDN7 264 aa16.9■□□□□ 0.3
HDAC4-205ENST00000454542 IGKV6D-41A0A0C4DH26 115 aa16.89■□□□□ 0.29
HDAC4-205ENST00000454542 A0A1W2PRG0 241 aa16.89■□□□□ 0.29
HDAC4-205ENST00000454542 FGRP09769 529 aa16.89■□□□□ 0.29
HDAC4-205ENST00000454542 HOXA7P31268 230 aaPredicted RBP16.89■□□□□ 0.29
HDAC4-205ENST00000454542 ICA1Q05084 483 aa16.89■□□□□ 0.29
HDAC4-205ENST00000454542 USP17L2Q6R6M4 530 aa16.89■□□□□ 0.29
HDAC4-205ENST00000454542 CWC27Q6UX04 472 aaKnown RBP16.89■□□□□ 0.29
HDAC4-205ENST00000454542 SKAP1Q86WV1 359 aa16.89■□□□□ 0.29
HDAC4-205ENST00000454542 SIAH1Q8IUQ4 282 aa16.89■□□□□ 0.29
HDAC4-205ENST00000454542 EMILIN3Q9NT22 766 aa16.89■□□□□ 0.29
HDAC4-205ENST00000454542 RLFQ13129 1914 aa16.89■□□□□ 0.29
HDAC4-205ENST00000454542 MPHOSPH10O00566 681 aaKnown RBP16.88■□□□□ 0.29
HDAC4-205ENST00000454542 FGAP02671 866 aa16.88■□□□□ 0.29
HDAC4-205ENST00000454542 CYP2C8P10632 490 aa16.88■□□□□ 0.29
HDAC4-205ENST00000454542 CHMLP26374 656 aa16.88■□□□□ 0.29
HDAC4-205ENST00000454542 USP14P54578 494 aa16.88■□□□□ 0.29
HDAC4-205ENST00000454542 CAP1Q01518 475 aa16.88■□□□□ 0.29
HDAC4-205ENST00000454542 CTU1Q7Z7A3 348 aaKnown RBP16.88■□□□□ 0.29
HDAC4-205ENST00000454542 CLEC10AQ8IUN9 316 aa16.88■□□□□ 0.29
HDAC4-205ENST00000454542 DSCC1Q9BVC3 393 aa16.88■□□□□ 0.29
HDAC4-205ENST00000454542 ZNF287Q9HBT7 754 aa16.88■□□□□ 0.29
HDAC4-205ENST00000454542 PNMA3Q9UL41 463 aa16.88■□□□□ 0.29
HDAC4-205ENST00000454542 TACC3Q9Y6A5 838 aa16.88■□□□□ 0.29
HDAC4-205ENST00000454542 HTTP42858 3142 aa16.88■□□□□ 0.29
HDAC4-205ENST00000454542 MGAMO43451 1857 aa16.88■□□□□ 0.29
HDAC4-205ENST00000454542 MYH4Q9Y623 1939 aa16.88■□□□□ 0.29
HDAC4-205ENST00000454542 SP3Q02447 781 aa16.87■□□□□ 0.29
HDAC4-205ENST00000454542 PABPC4Q13310 644 aaKnown RBP eCLIP16.87■□□□□ 0.29
HDAC4-205ENST00000454542 BMP2KLQ5H9B9 411 aa16.87■□□□□ 0.29
HDAC4-205ENST00000454542 ERO1AQ96HE7 468 aa16.87■□□□□ 0.29
HDAC4-205ENST00000454542 NBPF3Q9H094 633 aa16.87■□□□□ 0.29
HDAC4-205ENST00000454542 TMOD4Q9NZQ9 345 aa16.87■□□□□ 0.29
HDAC4-205ENST00000454542 SLC3A2P08195 630 aaKnown RBP16.86■□□□□ 0.29
HDAC4-205ENST00000454542 VCAM1P19320 739 aa16.86■□□□□ 0.29
HDAC4-205ENST00000454542 PDE4BQ07343 736 aa16.86■□□□□ 0.29
HDAC4-205ENST00000454542 TNS4Q8IZW8 715 aa16.86■□□□□ 0.29
HDAC4-205ENST00000454542 FEZ1Q99689 392 aa16.86■□□□□ 0.29
HDAC4-205ENST00000454542 ASCC2Q9H1I8 757 aaPredicted RBP16.86■□□□□ 0.29
HDAC4-205ENST00000454542 KANSL2Q9H9L4 492 aa16.86■□□□□ 0.29
HDAC4-205ENST00000454542 TMX2Q9Y320 296 aa16.86■□□□□ 0.29
HDAC4-205ENST00000454542 ORC4O43929 436 aa16.85■□□□□ 0.29
HDAC4-205ENST00000454542 PRDM1O75626 825 aa16.85■□□□□ 0.29
HDAC4-205ENST00000454542 CD99L2Q8TCZ2 262 aa16.85■□□□□ 0.29
HDAC4-205ENST00000454542 MCOLN1Q9GZU1 580 aa16.85■□□□□ 0.29
HDAC4-205ENST00000454542 SH2D4AQ9H788 454 aa16.85■□□□□ 0.29
HDAC4-205ENST00000454542 MKNK2Q9HBH9 465 aa16.85■□□□□ 0.29
HDAC4-205ENST00000454542 ARHGEF10LQ9HCE6 1279 aa16.85■□□□□ 0.29
HDAC4-205ENST00000454542 PPP4R2Q9NY27 417 aa16.85■□□□□ 0.29
HDAC4-205ENST00000454542 CPA4Q9UI42 421 aa16.85■□□□□ 0.29
HDAC4-205ENST00000454542 SGSM2O43147 1006 aa16.84■□□□□ 0.29
HDAC4-205ENST00000454542 LACTBP83111 547 aaPredicted RBP16.84■□□□□ 0.29
HDAC4-205ENST00000454542 CTDSPL2Q05D32 466 aa16.84■□□□□ 0.29
HDAC4-205ENST00000454542 FAM110CQ1W6H9 321 aa16.84■□□□□ 0.29
HDAC4-205ENST00000454542 OTOP1Q7RTM1 612 aa16.84■□□□□ 0.29
HDAC4-205ENST00000454542 TBC1D10CQ8IV04 446 aa16.84■□□□□ 0.29
HDAC4-205ENST00000454542 STK11IPQ8N1F8 1099 aa16.84■□□□□ 0.29
HDAC4-205ENST00000454542 NEDD1Q8NHV4 660 aa16.84■□□□□ 0.29
HDAC4-205ENST00000454542 STAG1Q8WVM7 1258 aa16.84■□□□□ 0.29
HDAC4-205ENST00000454542 LPAR1Q92633 364 aa16.84■□□□□ 0.29
HDAC4-205ENST00000454542 VCPKMTQ9H867 229 aa16.84■□□□□ 0.29
HDAC4-205ENST00000454542 NYAP2Q9P242 653 aa16.84■□□□□ 0.29
HDAC4-205ENST00000454542 SYNPO2Q9UMS6 1093 aa16.84■□□□□ 0.29
HDAC4-205ENST00000454542 PCP11498 1178 aaKnown RBP16.83■□□□□ 0.28
HDAC4-205ENST00000454542 EEF2P13639 858 aaKnown RBP16.83■□□□□ 0.28
HDAC4-205ENST00000454542 OSBPP22059 807 aa16.83■□□□□ 0.28
HDAC4-205ENST00000454542 GCLCP48506 637 aaPredicted RBP16.83■□□□□ 0.28
HDAC4-205ENST00000454542 NOVP48745 357 aa16.83■□□□□ 0.28
HDAC4-205ENST00000454542 ZYXQ15942 572 aaKnown RBP16.83■□□□□ 0.28
HDAC4-205ENST00000454542 KIAA1755Q5JYT7 1200 aa16.83■□□□□ 0.28
HDAC4-205ENST00000454542 LBX2Q6XYB7 198 aa16.83■□□□□ 0.28
HDAC4-205ENST00000454542 SMCR8Q8TEV9 937 aaPredicted RBP16.83■□□□□ 0.28
HDAC4-205ENST00000454542 RUFY2Q8WXA3 655 aa16.83■□□□□ 0.28
HDAC4-205ENST00000454542 MORF4L1Q9UBU8 362 aa16.83■□□□□ 0.28
HDAC4-205ENST00000454542 CTGFP29279 349 aa16.82■□□□□ 0.28
HDAC4-205ENST00000454542 HERVK_113P62684 666 aa16.82■□□□□ 0.28
HDAC4-205ENST00000454542 IRX3P78415 501 aaPredicted RBP16.82■□□□□ 0.28
HDAC4-205ENST00000454542 PKN2Q16513 984 aaKnown RBP16.82■□□□□ 0.28
HDAC4-205ENST00000454542 POTEEQ6S8J3 1075 aa16.82■□□□□ 0.28
HDAC4-205ENST00000454542 CATSPERGQ6ZRH7 1159 aa16.82■□□□□ 0.28
HDAC4-205ENST00000454542 ZNF444Q8N0Y2 327 aaPredicted RBP16.82■□□□□ 0.28
HDAC4-205ENST00000454542 GTF3C2Q8WUA4 911 aaPredicted RBP16.82■□□□□ 0.28
HDAC4-205ENST00000454542 CEP95Q96GE4 821 aa16.82■□□□□ 0.28
HDAC4-205ENST00000454542 MTMR4Q9NYA4 1195 aa16.82■□□□□ 0.28
HDAC4-205ENST00000454542 USP17L15C9J2P7 530 aa16.81■□□□□ 0.28
HDAC4-205ENST00000454542 USP17L13C9JLJ4 530 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms