RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 USP17L22D6RA61 530 aa12.94□□□□□ -0.34
LMCD1-205ENST00000454244 USP17L17D6RBQ6 530 aa12.94□□□□□ -0.34
LMCD1-205ENST00000454244 USP17L19D6RCP7 530 aa12.94□□□□□ -0.34
LMCD1-205ENST00000454244 USP17L20D6RJB6 530 aa12.94□□□□□ -0.34
LMCD1-205ENST00000454244 ERC2O15083 957 aa12.94□□□□□ -0.34
LMCD1-205ENST00000454244 RNF113AO15541 343 aaKnown RBP12.94□□□□□ -0.34
LMCD1-205ENST00000454244 GLRX3O76003 335 aaKnown RBP12.94□□□□□ -0.34
LMCD1-205ENST00000454244 ELNP15502 786 aa12.94□□□□□ -0.34
LMCD1-205ENST00000454244 UBXN2AP68543 259 aa12.94□□□□□ -0.34
LMCD1-205ENST00000454244 USP17L24Q0WX57 530 aa12.94□□□□□ -0.34
LMCD1-205ENST00000454244 IRF5Q13568 498 aa12.94□□□□□ -0.34
LMCD1-205ENST00000454244 ANKRD45Q5TZF3 282 aa12.94□□□□□ -0.34
LMCD1-205ENST00000454244 GPRC5AQ8NFJ5 357 aa12.94□□□□□ -0.34
LMCD1-205ENST00000454244 PI4K2BQ8TCG2 481 aa12.94□□□□□ -0.34
LMCD1-205ENST00000454244 OSBP2Q969R2 916 aa12.94□□□□□ -0.34
LMCD1-205ENST00000454244 STRBPQ96SI9 672 aaKnown RBP12.94□□□□□ -0.34
LMCD1-205ENST00000454244 PAGR1Q9BTK6 254 aa12.94□□□□□ -0.34
LMCD1-205ENST00000454244 RBPJLQ9UBG7 517 aa12.94□□□□□ -0.34
LMCD1-205ENST00000454244 ZBTB47Q9UFB7 747 aaPredicted RBP12.94□□□□□ -0.34
LMCD1-205ENST00000454244 KIAA0100Q14667 2235 aaKnown RBP12.94□□□□□ -0.34
LMCD1-205ENST00000454244 DDX60LQ5H9U9 1706 aaKnown RBP12.93□□□□□ -0.34
LMCD1-205ENST00000454244 NAV1Q8NEY1 1877 aa12.93□□□□□ -0.34
LMCD1-205ENST00000454244 A0A1W2PRG0 241 aa12.93□□□□□ -0.34
LMCD1-205ENST00000454244 ZFYP08048 801 aaPredicted RBP12.93□□□□□ -0.34
LMCD1-205ENST00000454244 CCL5P13501 91 aa12.93□□□□□ -0.34
LMCD1-205ENST00000454244 AKR1B1P15121 316 aa12.93□□□□□ -0.34
LMCD1-205ENST00000454244 VCAM1P19320 739 aa12.93□□□□□ -0.34
LMCD1-205ENST00000454244 MX1P20591 662 aa12.93□□□□□ -0.34
LMCD1-205ENST00000454244 CDK8P49336 464 aa12.93□□□□□ -0.34
LMCD1-205ENST00000454244 CTR9Q6PD62 1173 aa12.93□□□□□ -0.34
LMCD1-205ENST00000454244 POTEEQ6S8J3 1075 aa12.93□□□□□ -0.34
LMCD1-205ENST00000454244 TMEM179Q6ZVK1 233 aa12.93□□□□□ -0.34
LMCD1-205ENST00000454244 PXYLP1Q8TE99 480 aa12.93□□□□□ -0.34
LMCD1-205ENST00000454244 GTF3C2Q8WUA4 911 aaPredicted RBP12.93□□□□□ -0.34
LMCD1-205ENST00000454244 CCDC17Q96LX7 622 aa12.93□□□□□ -0.34
LMCD1-205ENST00000454244 RNF208Q9H0X6 261 aa12.93□□□□□ -0.34
LMCD1-205ENST00000454244 GSG1L2A8MUP6 293 aa12.92□□□□□ -0.34
LMCD1-205ENST00000454244 M0R2C6 588 aa12.92□□□□□ -0.34
LMCD1-205ENST00000454244 GPAA1O43292 621 aa12.92□□□□□ -0.34
LMCD1-205ENST00000454244 INHAP05111 366 aa12.92□□□□□ -0.34
LMCD1-205ENST00000454244 ERVK-9P63128 1117 aa12.92□□□□□ -0.34
LMCD1-205ENST00000454244 ERVK-24P63145 666 aa12.92□□□□□ -0.34
LMCD1-205ENST00000454244 HDAC1Q13547 482 aaPredicted RBP12.92□□□□□ -0.34
LMCD1-205ENST00000454244 LRRFIP1Q32MZ4 808 aaKnown RBP12.92□□□□□ -0.34
LMCD1-205ENST00000454244 Q3C1V9 767 aa12.92□□□□□ -0.34
LMCD1-205ENST00000454244 CATSPERGQ6ZRH7 1159 aa12.92□□□□□ -0.34
LMCD1-205ENST00000454244 C16orf86Q6ZW13 317 aa12.92□□□□□ -0.34
LMCD1-205ENST00000454244 CLEC10AQ8IUN9 316 aa12.92□□□□□ -0.34
LMCD1-205ENST00000454244 GCC1Q96CN9 775 aa12.92□□□□□ -0.34
LMCD1-205ENST00000454244 FSD1Q9BTV5 496 aa12.92□□□□□ -0.34
LMCD1-205ENST00000454244 UNC93B1Q9H1C4 597 aa12.92□□□□□ -0.34
LMCD1-205ENST00000454244 RPAP3Q9H6T3 665 aaPredicted RBP12.92□□□□□ -0.34
LMCD1-205ENST00000454244 ARPP21Q9UBL0 812 aaPredicted RBP12.92□□□□□ -0.34
LMCD1-205ENST00000454244 GJD2Q9UKL4 321 aa12.92□□□□□ -0.34
LMCD1-205ENST00000454244 SALL3Q9BXA9 1300 aa12.91□□□□□ -0.34
LMCD1-205ENST00000454244 GJB1P08034 283 aa12.91□□□□□ -0.34
LMCD1-205ENST00000454244 ICA1Q05084 483 aa12.91□□□□□ -0.34
LMCD1-205ENST00000454244 PRPF38BQ5VTL8 546 aaKnown RBP12.91□□□□□ -0.34
LMCD1-205ENST00000454244 CCAR1Q8IX12 1150 aaKnown RBP12.91□□□□□ -0.34
LMCD1-205ENST00000454244 SHISA4Q96DD7 197 aa12.91□□□□□ -0.34
LMCD1-205ENST00000454244 PORCNQ9H237 461 aa12.91□□□□□ -0.34
LMCD1-205ENST00000454244 RABGAP1Q9Y3P9 1069 aa12.91□□□□□ -0.34
LMCD1-205ENST00000454244 MINDY4BA8MYZ0 360 aa12.9□□□□□ -0.34
LMCD1-205ENST00000454244 CNMDO75829 334 aa12.9□□□□□ -0.34
LMCD1-205ENST00000454244 MAPK4P31152 587 aa12.9□□□□□ -0.34
LMCD1-205ENST00000454244 GJA8P48165 433 aa12.9□□□□□ -0.34
LMCD1-205ENST00000454244 SBK1Q52WX2 424 aa12.9□□□□□ -0.34
LMCD1-205ENST00000454244 GIMAP6Q6P9H5 292 aa12.9□□□□□ -0.34
LMCD1-205ENST00000454244 SIAH1Q8IUQ4 282 aa12.9□□□□□ -0.34
LMCD1-205ENST00000454244 STK11IPQ8N1F8 1099 aa12.9□□□□□ -0.34
LMCD1-205ENST00000454244 NKX2-3Q8TAU0 364 aa12.9□□□□□ -0.34
LMCD1-205ENST00000454244 SEC62Q99442 399 aaKnown RBP12.9□□□□□ -0.34
LMCD1-205ENST00000454244 ARHGEF10LQ9HCE6 1279 aa12.9□□□□□ -0.34
LMCD1-205ENST00000454244 EPB41L4AQ9HCS5 686 aaPredicted RBP12.9□□□□□ -0.34
LMCD1-205ENST00000454244 PDE4DIPQ5VU43 2346 aa12.89□□□□□ -0.35
LMCD1-205ENST00000454244 SPDYE16A6NNV3 312 aaPredicted RBP12.89□□□□□ -0.35
LMCD1-205ENST00000454244 APPP05067 770 aa12.89□□□□□ -0.35
LMCD1-205ENST00000454244 GNAT2P19087 354 aa12.89□□□□□ -0.35
LMCD1-205ENST00000454244 CYP2B6P20813 491 aa12.89□□□□□ -0.35
LMCD1-205ENST00000454244 TDO2P48775 406 aa12.89□□□□□ -0.35
LMCD1-205ENST00000454244 ATP2B2Q01814 1243 aa12.89□□□□□ -0.35
LMCD1-205ENST00000454244 AAMPQ13685 434 aa12.89□□□□□ -0.35
LMCD1-205ENST00000454244 KIAA1755Q5JYT7 1200 aa12.89□□□□□ -0.35
LMCD1-205ENST00000454244 ZMYM1Q5SVZ6 1142 aa12.89□□□□□ -0.35
LMCD1-205ENST00000454244 GPR142Q7Z601 462 aa12.89□□□□□ -0.35
LMCD1-205ENST00000454244 EXOC6Q8TAG9 804 aa12.89□□□□□ -0.35
LMCD1-205ENST00000454244 U2AF1L4Q8WU68 220 aaKnown RBP12.89□□□□□ -0.35
LMCD1-205ENST00000454244 SOCS4Q8WXH5 440 aa12.89□□□□□ -0.35
LMCD1-205ENST00000454244 NUDT12Q9BQG2 462 aa12.89□□□□□ -0.35
LMCD1-205ENST00000454244 TANGO6Q9C0B7 1094 aa12.89□□□□□ -0.35
LMCD1-205ENST00000454244 SH2D4AQ9H788 454 aa12.89□□□□□ -0.35
LMCD1-205ENST00000454244 CWC22Q9HCG8 908 aaKnown RBP12.89□□□□□ -0.35
LMCD1-205ENST00000454244 TMX2Q9Y320 296 aa12.89□□□□□ -0.35
LMCD1-205ENST00000454244 HTTP42858 3142 aa12.88□□□□□ -0.35
LMCD1-205ENST00000454244 PATL2C9JE40 543 aaKnown RBP12.88□□□□□ -0.35
LMCD1-205ENST00000454244 HMGCRP04035 888 aa12.88□□□□□ -0.35
LMCD1-205ENST00000454244 EEF2P13639 858 aaKnown RBP12.88□□□□□ -0.35
LMCD1-205ENST00000454244 RASA1P20936 1047 aa12.88□□□□□ -0.35
LMCD1-205ENST00000454244 PDE1AP54750 535 aa12.88□□□□□ -0.35
LMCD1-205ENST00000454244 CCNA1P78396 465 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms