RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 AFF2P51816 1311 aa20.87■□□□□ 0.93
MECP2-205ENST00000453960 UQCRHLA0A096LP55 91 aa20.87■□□□□ 0.93
MECP2-205ENST00000453960 KLRG2A4D1S0 409 aaPredicted RBP20.87■□□□□ 0.93
MECP2-205ENST00000453960 LDHBP07195 334 aaKnown RBP20.87■□□□□ 0.93
MECP2-205ENST00000453960 UQCRHP07919 91 aa20.87■□□□□ 0.93
MECP2-205ENST00000453960 CYP2D6P10635 497 aa20.87■□□□□ 0.93
MECP2-205ENST00000453960 GYS1P13807 737 aa20.87■□□□□ 0.93
MECP2-205ENST00000453960 HOXA10P31260 410 aaPredicted RBP20.87■□□□□ 0.93
MECP2-205ENST00000453960 SARSP49591 514 aaKnown RBP20.87■□□□□ 0.93
MECP2-205ENST00000453960 ZNF804AQ7Z570 1209 aa20.87■□□□□ 0.93
MECP2-205ENST00000453960 DGKHQ86XP1 1220 aa20.87■□□□□ 0.93
MECP2-205ENST00000453960 SRBD1Q8N5C6 995 aaKnown RBP20.87■□□□□ 0.93
MECP2-205ENST00000453960 FAM13BQ9NYF5 915 aa20.87■□□□□ 0.93
MECP2-205ENST00000453960 V9GY48 417 aaPredicted RBP20.87■□□□□ 0.93
MECP2-205ENST00000453960 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.86■□□□□ 0.93
MECP2-205ENST00000453960 IL1R1P14778 569 aa20.86■□□□□ 0.93
MECP2-205ENST00000453960 GRIN1Q05586 938 aa20.86■□□□□ 0.93
MECP2-205ENST00000453960 SLC27A3Q5K4L6 730 aa20.86■□□□□ 0.93
MECP2-205ENST00000453960 SEPT12Q8IYM1 358 aa20.86■□□□□ 0.93
MECP2-205ENST00000453960 CNNM3Q8NE01 707 aa20.86■□□□□ 0.93
MECP2-205ENST00000453960 SPATA20Q8TB22 786 aa20.86■□□□□ 0.93
MECP2-205ENST00000453960 CABP5Q9NP86 173 aa20.86■□□□□ 0.93
MECP2-205ENST00000453960 PODXL2Q9NZ53 605 aa20.86■□□□□ 0.93
MECP2-205ENST00000453960 VPS54Q9P1Q0 977 aa20.86■□□□□ 0.93
MECP2-205ENST00000453960 TRPC5Q9UL62 973 aaPredicted RBP20.86■□□□□ 0.93
MECP2-205ENST00000453960 TRIM75PA6NK02 468 aa20.85■□□□□ 0.93
MECP2-205ENST00000453960 GSDMDP57764 484 aa20.85■□□□□ 0.93
MECP2-205ENST00000453960 PNOCQ13519 176 aa20.85■□□□□ 0.93
MECP2-205ENST00000453960 DHX8Q14562 1220 aaKnown RBP20.85■□□□□ 0.93
MECP2-205ENST00000453960 CCDC178Q5BJE1 867 aa20.85■□□□□ 0.93
MECP2-205ENST00000453960 CTCFLQ8NI51 663 aaPredicted RBP20.85■□□□□ 0.93
MECP2-205ENST00000453960 ANKIB1Q9P2G1 1089 aa20.85■□□□□ 0.93
MECP2-205ENST00000453960 NRXN2Q9P2S2 1712 aa20.85■□□□□ 0.93
MECP2-205ENST00000453960 BRWD3Q6RI45 1802 aa20.85■□□□□ 0.93
MECP2-205ENST00000453960 LDHCP07864 332 aa20.84■□□□□ 0.93
MECP2-205ENST00000453960 ATP2B4P23634 1241 aa20.84■□□□□ 0.93
MECP2-205ENST00000453960 TPM4P67936 248 aa20.84■□□□□ 0.93
MECP2-205ENST00000453960 FAM163AQ96GL9 167 aaPredicted RBP20.84■□□□□ 0.93
MECP2-205ENST00000453960 HOOK1Q9UJC3 728 aaKnown RBP20.84■□□□□ 0.93
MECP2-205ENST00000453960 PCDHA5Q9Y5H7 936 aa20.84■□□□□ 0.93
MECP2-205ENST00000453960 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.84■□□□□ 0.93
MECP2-205ENST00000453960 BIN1O00499 593 aa20.84■□□□□ 0.93
MECP2-205ENST00000453960 ACTN4O43707 911 aaKnown RBP20.84■□□□□ 0.93
MECP2-205ENST00000453960 NMT2O60551 498 aa20.84■□□□□ 0.93
MECP2-205ENST00000453960 USP17L8P0C7I0 530 aa20.84■□□□□ 0.93
MECP2-205ENST00000453960 TRAPPC10P48553 1259 aa20.84■□□□□ 0.93
MECP2-205ENST00000453960 CCZ1BP86790 482 aa20.84■□□□□ 0.93
MECP2-205ENST00000453960 CCZ1P86791 482 aaPredicted RBP20.84■□□□□ 0.93
MECP2-205ENST00000453960 PFKFB3Q16875 520 aaPredicted RBP20.84■□□□□ 0.93
MECP2-205ENST00000453960 EARS2Q5JPH6 523 aaKnown RBP20.84■□□□□ 0.93
MECP2-205ENST00000453960 KANK3Q6NY19 840 aa20.84■□□□□ 0.93
MECP2-205ENST00000453960 TRIML1Q8N9V2 468 aa20.84■□□□□ 0.93
MECP2-205ENST00000453960 FERMT2Q96AC1 680 aa20.84■□□□□ 0.93
MECP2-205ENST00000453960 RTFDC1Q9BY42 306 aaPredicted RBP20.84■□□□□ 0.93
MECP2-205ENST00000453960 IL17RBQ9NRM6 502 aa20.84■□□□□ 0.93
MECP2-205ENST00000453960 MCM9Q9NXL9 1143 aa20.84■□□□□ 0.93
MECP2-205ENST00000453960 BAG3O95817 575 aa20.83■□□□□ 0.92
MECP2-205ENST00000453960 BMP6P22004 513 aa20.83■□□□□ 0.92
MECP2-205ENST00000453960 GPSM2P81274 684 aa20.83■□□□□ 0.92
MECP2-205ENST00000453960 GRIK5Q16478 980 aa20.83■□□□□ 0.92
MECP2-205ENST00000453960 FAM47AQ5JRC9 791 aa20.83■□□□□ 0.92
MECP2-205ENST00000453960 SLC51AQ86UW1 340 aa20.83■□□□□ 0.92
MECP2-205ENST00000453960 FAM177A1Q8N128 213 aaPredicted RBP20.83■□□□□ 0.92
MECP2-205ENST00000453960 UPF1Q92900 1129 aaKnown RBP eCLIP20.83■□□□□ 0.925e-7■■□□□ 11.4
MECP2-205ENST00000453960 ANKRD31Q8N7Z5 1873 aa20.83■□□□□ 0.92
MECP2-205ENST00000453960 MYH1P12882 1939 aa20.83■□□□□ 0.92
MECP2-205ENST00000453960 QSER1Q2KHR3 1735 aa20.83■□□□□ 0.92
MECP2-205ENST00000453960 BBOX1O75936 387 aa20.82■□□□□ 0.92
MECP2-205ENST00000453960 SCG2P13521 617 aa20.82■□□□□ 0.92
MECP2-205ENST00000453960 KIF5BP33176 963 aa20.82■□□□□ 0.92
MECP2-205ENST00000453960 MYL5Q02045 173 aa20.82■□□□□ 0.92
MECP2-205ENST00000453960 POSTNQ15063 836 aa20.82■□□□□ 0.92
MECP2-205ENST00000453960 SH3RF3Q8TEJ3 882 aaPredicted RBP20.82■□□□□ 0.92
MECP2-205ENST00000453960 XPO4Q9C0E2 1151 aaKnown RBP20.82■□□□□ 0.92
MECP2-205ENST00000453960 BRMS1Q9HCU9 246 aa20.82■□□□□ 0.92
MECP2-205ENST00000453960 CD209Q9NNX6 404 aa20.82■□□□□ 0.92
MECP2-205ENST00000453960 SH3GLB2Q9NR46 395 aa20.82■□□□□ 0.92
MECP2-205ENST00000453960 BAZ2BQ9UIF8 2168 aaKnown RBP20.82■□□□□ 0.92
MECP2-205ENST00000453960 GPR75-ASB3A0A0A6YYF3 556 aa20.81■□□□□ 0.92
MECP2-205ENST00000453960 FAM205CA6NFA0 338 aa20.81■□□□□ 0.92
MECP2-205ENST00000453960 TSPY2A6NKD2 308 aa20.81■□□□□ 0.92
MECP2-205ENST00000453960 SERPINB2P05120 415 aa20.81■□□□□ 0.92
MECP2-205ENST00000453960 RXRBP28702 533 aa20.81■□□□□ 0.92
MECP2-205ENST00000453960 KCNJ6P48051 423 aa20.81■□□□□ 0.92
MECP2-205ENST00000453960 DNTTIP2Q5QJE6 756 aaKnown RBP20.81■□□□□ 0.92
MECP2-205ENST00000453960 SH3RF1Q7Z6J0 888 aa20.81■□□□□ 0.92
MECP2-205ENST00000453960 RPGRQ92834 1020 aaKnown RBP20.81■□□□□ 0.92
MECP2-205ENST00000453960 CRAMP1Q96RY5 1269 aa20.81■□□□□ 0.92
MECP2-205ENST00000453960 CSRNP2Q9H175 543 aa20.81■□□□□ 0.92
MECP2-205ENST00000453960 ST5P78524 1137 aa20.81■□□□□ 0.92
MECP2-205ENST00000453960 MORC3Q14149 939 aa20.81■□□□□ 0.92
MECP2-205ENST00000453960 GRM4Q14833 912 aa20.81■□□□□ 0.92
MECP2-205ENST00000453960 CT47A1Q5JQC4 288 aaPredicted RBP20.81■□□□□ 0.92
MECP2-205ENST00000453960 RBM17Q96I25 401 aaKnown RBP20.81■□□□□ 0.92
MECP2-205ENST00000453960 MAN1B1Q9UKM7 699 aa20.81■□□□□ 0.92
MECP2-205ENST00000453960 NPHP1O15259 732 aa20.8■□□□□ 0.92
MECP2-205ENST00000453960 POLR2DO15514 142 aaKnown RBP20.8■□□□□ 0.92
MECP2-205ENST00000453960 ATP2C1P98194 919 aaPredicted RBP20.8■□□□□ 0.92
MECP2-205ENST00000453960 FANCCQ00597 558 aa20.8■□□□□ 0.92
MECP2-205ENST00000453960 TMC4Q7Z404 712 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms