RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 SPRYD3Q8NCJ5 442 aa14.66□□□□□ -0.06
HLA-DPA1-244ENST00000453337 GTF3C6Q969F1 213 aa14.66□□□□□ -0.06
HLA-DPA1-244ENST00000453337 LLPHQ9BRT6 129 aaKnown RBP14.66□□□□□ -0.06
HLA-DPA1-244ENST00000453337 KANSL2Q9H9L4 492 aa14.66□□□□□ -0.06
HLA-DPA1-244ENST00000453337 GINM1Q9NU53 330 aa14.66□□□□□ -0.06
HLA-DPA1-244ENST00000453337 MTMR4Q9NYA4 1195 aa14.66□□□□□ -0.06
HLA-DPA1-244ENST00000453337 SCAF8Q9UPN6 1271 aaKnown RBP14.66□□□□□ -0.06
HLA-DPA1-244ENST00000453337 SRCAPQ6ZRS2 3230 aa14.66□□□□□ -0.06
HLA-DPA1-244ENST00000453337 MYH4Q9Y623 1939 aa14.65□□□□□ -0.06
HLA-DPA1-244ENST00000453337 IGKV6D-41A0A0C4DH26 115 aa14.65□□□□□ -0.06
HLA-DPA1-244ENST00000453337 TTLL1O95922 423 aa14.65□□□□□ -0.06
HLA-DPA1-244ENST00000453337 TOP1P11387 765 aaKnown RBP14.65□□□□□ -0.06
HLA-DPA1-244ENST00000453337 METAP2P50579 478 aaKnown RBP eCLIP14.65□□□□□ -0.06
HLA-DPA1-244ENST00000453337 CCT2P78371 535 aaKnown RBP14.65□□□□□ -0.06
HLA-DPA1-244ENST00000453337 EAPPQ56P03 285 aaPredicted RBP14.65□□□□□ -0.06
HLA-DPA1-244ENST00000453337 KRT26Q7Z3Y9 468 aa14.65□□□□□ -0.06
HLA-DPA1-244ENST00000453337 ZNF654Q8IZM8 581 aa14.65□□□□□ -0.06
HLA-DPA1-244ENST00000453337 CEP95Q96GE4 821 aa14.65□□□□□ -0.06
HLA-DPA1-244ENST00000453337 MAP3K14Q99558 947 aa14.65□□□□□ -0.06
HLA-DPA1-244ENST00000453337 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.65□□□□□ -0.06
HLA-DPA1-244ENST00000453337 ZNF341Q9BYN7 854 aa14.65□□□□□ -0.06
HLA-DPA1-244ENST00000453337 RRAGCQ9HB90 399 aa14.65□□□□□ -0.06
HLA-DPA1-244ENST00000453337 SENP2Q9HC62 589 aa14.65□□□□□ -0.06
HLA-DPA1-244ENST00000453337 STX8Q9UNK0 236 aa14.65□□□□□ -0.06
HLA-DPA1-244ENST00000453337 CTNND1O60716 968 aaKnown RBP14.64□□□□□ -0.07
HLA-DPA1-244ENST00000453337 DDAH1O94760 285 aa14.64□□□□□ -0.07
HLA-DPA1-244ENST00000453337 SLURP2P0DP57 97 aa14.64□□□□□ -0.07
HLA-DPA1-244ENST00000453337 CAP2P40123 477 aa14.64□□□□□ -0.07
HLA-DPA1-244ENST00000453337 SCRN1Q12765 414 aa14.64□□□□□ -0.07
HLA-DPA1-244ENST00000453337 CDC37L1Q7L3B6 337 aa14.64□□□□□ -0.07
HLA-DPA1-244ENST00000453337 CDAN1Q8IWY9 1227 aa14.64□□□□□ -0.07
HLA-DPA1-244ENST00000453337 FANCBQ8NB91 859 aa14.64□□□□□ -0.07
HLA-DPA1-244ENST00000453337 TMEM47Q9BQJ4 181 aa14.64□□□□□ -0.07
HLA-DPA1-244ENST00000453337 FOXD4L1Q9NU39 408 aa14.64□□□□□ -0.07
HLA-DPA1-244ENST00000453337 NYAP2Q9P242 653 aa14.64□□□□□ -0.07
HLA-DPA1-244ENST00000453337 CLIP2Q9UDT6 1046 aa14.64□□□□□ -0.07
HLA-DPA1-244ENST00000453337 HPS5Q9UPZ3 1129 aa14.64□□□□□ -0.07
HLA-DPA1-244ENST00000453337 SMC3Q9UQE7 1217 aa14.64□□□□□ -0.07
HLA-DPA1-244ENST00000453337 CLEC11AQ9Y240 323 aa14.64□□□□□ -0.07
HLA-DPA1-244ENST00000453337 GREB1LQ9C091 1923 aaPredicted RBP14.64□□□□□ -0.07
HLA-DPA1-244ENST00000453337 GOLGA8AA7E2F4 631 aa14.63□□□□□ -0.07
HLA-DPA1-244ENST00000453337 PHF20L1A8MW92 1017 aa14.63□□□□□ -0.07
HLA-DPA1-244ENST00000453337 CPLX1O14810 134 aa14.63□□□□□ -0.07
HLA-DPA1-244ENST00000453337 GH2P01242 217 aa14.63□□□□□ -0.07
HLA-DPA1-244ENST00000453337 ASNSP08243 561 aa14.63□□□□□ -0.07
HLA-DPA1-244ENST00000453337 PDIA4P13667 645 aaKnown RBP14.63□□□□□ -0.07
HLA-DPA1-244ENST00000453337 NF2P35240 595 aa14.63□□□□□ -0.07
HLA-DPA1-244ENST00000453337 MICU3Q86XE3 530 aa14.63□□□□□ -0.07
HLA-DPA1-244ENST00000453337 PNMA1Q8ND90 353 aa14.63□□□□□ -0.07
HLA-DPA1-244ENST00000453337 NUP133Q8WUM0 1156 aa14.63□□□□□ -0.07
HLA-DPA1-244ENST00000453337 MKL1Q969V6 931 aa14.63□□□□□ -0.07
HLA-DPA1-244ENST00000453337 RBM28Q9NW13 759 aaKnown RBP14.63□□□□□ -0.07
HLA-DPA1-244ENST00000453337 CDKL5O76039 1030 aa14.62□□□□□ -0.07
HLA-DPA1-244ENST00000453337 GDF11O95390 407 aa14.62□□□□□ -0.07
HLA-DPA1-244ENST00000453337 KIF5BP33176 963 aa14.62□□□□□ -0.07
HLA-DPA1-244ENST00000453337 TROAPQ12815 778 aa14.62□□□□□ -0.07
HLA-DPA1-244ENST00000453337 SEPT2Q15019 361 aa14.62□□□□□ -0.07
HLA-DPA1-244ENST00000453337 RTN1Q16799 776 aa14.62□□□□□ -0.07
HLA-DPA1-244ENST00000453337 PRAMEF18Q5VWM3 479 aa14.62□□□□□ -0.07
HLA-DPA1-244ENST00000453337 USP48Q86UV5 1035 aa14.62□□□□□ -0.07
HLA-DPA1-244ENST00000453337 CTCFLQ8NI51 663 aaPredicted RBP14.62□□□□□ -0.07
HLA-DPA1-244ENST00000453337 ZNF112Q9UJU3 913 aa14.62□□□□□ -0.07
HLA-DPA1-244ENST00000453337 SYNPO2Q9UMS6 1093 aa14.62□□□□□ -0.07
HLA-DPA1-244ENST00000453337 NID2Q14112 1375 aa14.61□□□□□ -0.07
HLA-DPA1-244ENST00000453337 PPP1R12BO60237 982 aaPredicted RBP14.61□□□□□ -0.07
HLA-DPA1-244ENST00000453337 GUCY1A2P33402 732 aa14.61□□□□□ -0.07
HLA-DPA1-244ENST00000453337 ADD1P35611 737 aaKnown RBP14.61□□□□□ -0.07
HLA-DPA1-244ENST00000453337 GNAQP50148 359 aa14.61□□□□□ -0.07
HLA-DPA1-244ENST00000453337 HMGN5P82970 282 aaKnown RBP14.61□□□□□ -0.07
HLA-DPA1-244ENST00000453337 ATP2B2Q01814 1243 aa14.61□□□□□ -0.07
HLA-DPA1-244ENST00000453337 ICA1Q05084 483 aa14.61□□□□□ -0.07
HLA-DPA1-244ENST00000453337 RRP1BQ14684 758 aaKnown RBP14.61□□□□□ -0.07
HLA-DPA1-244ENST00000453337 RAB3GAP1Q15042 981 aa14.61□□□□□ -0.07
HLA-DPA1-244ENST00000453337 MYL10Q9BUA6 226 aa14.61□□□□□ -0.07
HLA-DPA1-244ENST00000453337 NCOA5Q9HCD5 579 aaKnown RBP14.61□□□□□ -0.07
HLA-DPA1-244ENST00000453337 ARHGEF10LQ9HCE6 1279 aa14.61□□□□□ -0.07
HLA-DPA1-244ENST00000453337 ZBTB21Q9ULJ3 1066 aa14.61□□□□□ -0.07
HLA-DPA1-244ENST00000453337 CIZ1Q9ULV3 898 aaPredicted RBP14.61□□□□□ -0.07
HLA-DPA1-244ENST00000453337 KIF3AQ9Y496 699 aa14.61□□□□□ -0.07
HLA-DPA1-244ENST00000453337 ATAD5Q96QE3 1844 aa14.61□□□□□ -0.07
HLA-DPA1-244ENST00000453337 EEF2P13639 858 aaKnown RBP14.6□□□□□ -0.07
HLA-DPA1-244ENST00000453337 RXRAP19793 462 aa14.6□□□□□ -0.07
HLA-DPA1-244ENST00000453337 ST3GAL1Q11201 340 aa14.6□□□□□ -0.07
HLA-DPA1-244ENST00000453337 LDHDQ86WU2 507 aa14.6□□□□□ -0.07
HLA-DPA1-244ENST00000453337 RAB11FIP4Q86YS3 637 aa14.6□□□□□ -0.07
HLA-DPA1-244ENST00000453337 CCDC144CPQ8IYA2 1237 aa14.6□□□□□ -0.07
HLA-DPA1-244ENST00000453337 SMARCC2Q8TAQ2 1214 aa14.6□□□□□ -0.07
HLA-DPA1-244ENST00000453337 LZTS2Q9BRK4 669 aa14.6□□□□□ -0.07
HLA-DPA1-244ENST00000453337 FAM217BQ9NTX9 383 aaPredicted RBP14.6□□□□□ -0.07
HLA-DPA1-244ENST00000453337 CHMP5Q9NZZ3 219 aa14.6□□□□□ -0.07
HLA-DPA1-244ENST00000453337 MYH6P13533 1939 aa14.6□□□□□ -0.07
HLA-DPA1-244ENST00000453337 ADM5C9JUS6 153 aa14.59□□□□□ -0.07
HLA-DPA1-244ENST00000453337 USP2O75604 605 aaPredicted RBP14.59□□□□□ -0.07
HLA-DPA1-244ENST00000453337 IFNAR1P17181 557 aa14.59□□□□□ -0.07
HLA-DPA1-244ENST00000453337 PDCP20941 246 aa14.59□□□□□ -0.07
HLA-DPA1-244ENST00000453337 GJB2P29033 226 aa14.59□□□□□ -0.07
HLA-DPA1-244ENST00000453337 CDC27P30260 824 aa14.59□□□□□ -0.07
HLA-DPA1-244ENST00000453337 JAG1P78504 1218 aa14.59□□□□□ -0.07
HLA-DPA1-244ENST00000453337 SSRP1Q08945 709 aaKnown RBP14.59□□□□□ -0.07
HLA-DPA1-244ENST00000453337 GRM4Q14833 912 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms