RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 CCDC87Q9NVE4 849 aa8.65□□□□□ -1.02
RIF1-206ENST00000453091 CHGBP05060 677 aa8.65□□□□□ -1.02
RIF1-206ENST00000453091 CCT5P48643 541 aa8.65□□□□□ -1.02
RIF1-206ENST00000453091 ETF1P62495 437 aaKnown RBP8.65□□□□□ -1.02
RIF1-206ENST00000453091 DYNLL1P63167 89 aaKnown RBP8.65□□□□□ -1.02
RIF1-206ENST00000453091 GSTO1P78417 241 aa8.65□□□□□ -1.02
RIF1-206ENST00000453091 LSM14BQ9BX40 385 aaKnown RBP8.65□□□□□ -1.02
RIF1-206ENST00000453091 PDE8AO60658 829 aa8.65□□□□□ -1.03
RIF1-206ENST00000453091 ZBTB16Q05516 673 aa8.65□□□□□ -1.03
RIF1-206ENST00000453091 GSPT2Q8IYD1 628 aaKnown RBP8.65□□□□□ -1.03
RIF1-206ENST00000453091 ERMNQ8TAM6 284 aa8.65□□□□□ -1.03
RIF1-206ENST00000453091 SYNCQ9H7C4 482 aa8.65□□□□□ -1.03
RIF1-206ENST00000453091 LRWD1Q9UFC0 647 aa8.65□□□□□ -1.03
RIF1-206ENST00000453091 LMTK3Q96Q04 1460 aa8.65□□□□□ -1.03
RIF1-206ENST00000453091 FGAP02671 866 aa8.65□□□□□ -1.03
RIF1-206ENST00000453091 TNFAIP3P21580 790 aa8.65□□□□□ -1.03
RIF1-206ENST00000453091 TMEM87BQ96K49 555 aa8.65□□□□□ -1.03
RIF1-206ENST00000453091 SLF2Q8IX21 1173 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 MARCH10Q8NA82 808 aaPredicted RBP8.64□□□□□ -1.03
RIF1-206ENST00000453091 CSRNP2Q9H175 543 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 SLC39A2Q9NP94 309 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 ATP6V0A2Q9Y487 856 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 ABCB4P21439 1286 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 PPARAQ07869 468 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 PPP4R3AQ6IN85 833 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 SYMPKQ92797 1274 aaKnown RBP8.64□□□□□ -1.03
RIF1-206ENST00000453091 MAP4K1Q92918 833 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 LRRC27Q9C0I9 530 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 BAIAP2L1Q9UHR4 511 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 TECP42680 631 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 LRRC41Q15345 812 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 CEP85LQ5SZL2 805 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 IKBKGQ9Y6K9 419 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 TRPM2O94759 1503 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 ERVK-7P63135 1459 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 CXCR5P32302 372 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 PEG3Q9GZU2 1588 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 CYP2D7A0A087X1C5 515 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 SPOPO43791 374 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 PHKA1P46020 1223 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 INF2Q27J81 1249 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 CNBD1Q8NA66 436 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 U2AF1L4Q8WU68 220 aaKnown RBP8.64□□□□□ -1.03
RIF1-206ENST00000453091 FAM204AQ9H8W3 233 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 BUB1BO60566 1050 aaPredicted RBP8.64□□□□□ -1.03
RIF1-206ENST00000453091 UBXN2AP68543 259 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 NCBP1Q09161 790 aaKnown RBP8.64□□□□□ -1.03
RIF1-206ENST00000453091 TMTC1Q8IUR5 882 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 MRFAP1L1Q96HT8 127 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 TM6SF1Q9BZW5 370 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 CFAP43Q8NDM7 1665 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 USPL1Q5W0Q7 1092 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 ZNF654Q8IZM8 581 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 CPXCR1Q8N123 301 aa8.64□□□□□ -1.03
RIF1-206ENST00000453091 SNAP25P60880 206 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 CUL4AQ13619 759 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 PUM3Q15397 648 aaKnown RBP8.63□□□□□ -1.03
RIF1-206ENST00000453091 SH3TC1Q8TE82 1336 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 GNAT2P19087 354 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 CALML3P27482 149 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 VPS41P49754 854 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 TFAP4Q01664 338 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 GPR161Q8N6U8 529 aaKnown RBP8.63□□□□□ -1.03
RIF1-206ENST00000453091 NOX5Q96PH1 765 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 ZCCHC17Q9NP64 241 aaKnown RBP8.63□□□□□ -1.03
RIF1-206ENST00000453091 CTTNBP2NLQ9P2B4 639 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 B4DLN1 442 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 GTF2IP78347 998 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 NR5A1Q13285 461 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 HERC4Q5GLZ8 1057 aaPredicted RBP8.63□□□□□ -1.03
RIF1-206ENST00000453091 NOSTRINQ8IVI9 506 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 DSCC1Q9BVC3 393 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 PARD6BQ9BYG5 372 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 EDC4Q6P2E9 1401 aaKnown RBP8.63□□□□□ -1.03
RIF1-206ENST00000453091 TOM1O60784 492 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 MYCLP12524 364 aaPredicted RBP8.63□□□□□ -1.03
RIF1-206ENST00000453091 HNRNPH2P55795 449 aaKnown RBP8.63□□□□□ -1.03
RIF1-206ENST00000453091 KLHL30Q0D2K2 578 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 TCHPQ9BT92 498 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 CA8P35219 290 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 ATL3Q6DD88 541 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 IFIH1Q9BYX4 1025 aaKnown RBP8.63□□□□□ -1.03
RIF1-206ENST00000453091 PPP1R12CQ9BZL4 782 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 IQCGQ9H095 443 aaKnown RBP8.63□□□□□ -1.03
RIF1-206ENST00000453091 RBM28Q9NW13 759 aaKnown RBP8.63□□□□□ -1.03
RIF1-206ENST00000453091 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.63□□□□□ -1.03
RIF1-206ENST00000453091 USP17L12C9JPN9 530 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 USP17L21D6R901 530 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 RESTQ13127 1097 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 PPP1R21Q6ZMI0 780 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 LMBR1Q8WVP7 490 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 ZBTB1Q9Y2K1 713 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 CEP83Q9Y592 693 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 SAR1BQ9Y6B6 198 aa8.63□□□□□ -1.03
RIF1-206ENST00000453091 SEL1L2Q5TEA6 688 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 TOGARAM2Q6ZUX3 1019 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 PHLDB2Q86SQ0 1253 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 IFNL3Q8IZI9 196 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 ANKS4BQ8N8V4 417 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 CABS1Q96KC9 395 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms