RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 C11orf49Q9H6J7 331 aa14.21□□□□□ -0.13
GARNL3-210ENST00000453030 IL1RAPL2Q9NP60 686 aa14.21□□□□□ -0.13
GARNL3-210ENST00000453030 RLFQ13129 1914 aa14.21□□□□□ -0.14
GARNL3-210ENST00000453030 LAMA2P24043 3122 aaKnown RBP14.2□□□□□ -0.14
GARNL3-210ENST00000453030 APBB1O00213 710 aa14.2□□□□□ -0.14
GARNL3-210ENST00000453030 SOX1O00570 391 aaPredicted RBP14.2□□□□□ -0.14
GARNL3-210ENST00000453030 XRCC5P13010 732 aaKnown RBP14.2□□□□□ -0.14
GARNL3-210ENST00000453030 VCAM1P19320 739 aa14.2□□□□□ -0.14
GARNL3-210ENST00000453030 RGS2P41220 211 aa14.2□□□□□ -0.14
GARNL3-210ENST00000453030 ABCB5Q2M3G0 1257 aa14.2□□□□□ -0.14
GARNL3-210ENST00000453030 CERKLQ49MI3 558 aaPredicted RBP14.2□□□□□ -0.14
GARNL3-210ENST00000453030 WDR78Q5VTH9 848 aa14.2□□□□□ -0.14
GARNL3-210ENST00000453030 TATDN1Q6P1N9 297 aa14.2□□□□□ -0.14
GARNL3-210ENST00000453030 PLEKHH3Q7Z736 793 aa14.2□□□□□ -0.14
GARNL3-210ENST00000453030 ACER1Q8TDN7 264 aa14.2□□□□□ -0.14
GARNL3-210ENST00000453030 C12orf42Q96LP6 360 aa14.2□□□□□ -0.14
GARNL3-210ENST00000453030 APBA2Q99767 749 aa14.2□□□□□ -0.14
GARNL3-210ENST00000453030 EHD4Q9H223 541 aa14.2□□□□□ -0.14
GARNL3-210ENST00000453030 OGDHLQ9ULD0 1010 aa14.2□□□□□ -0.14
GARNL3-210ENST00000453030 COL11A1P12107 1806 aaPredicted RBP14.2□□□□□ -0.14
GARNL3-210ENST00000453030 PFASO15067 1338 aa14.19□□□□□ -0.14
GARNL3-210ENST00000453030 A0A1W2PPC1 479 aa14.19□□□□□ -0.14
GARNL3-210ENST00000453030 USP17L15C9J2P7 530 aa14.19□□□□□ -0.14
GARNL3-210ENST00000453030 USP17L13C9JLJ4 530 aa14.19□□□□□ -0.14
GARNL3-210ENST00000453030 USP17L11C9JVI0 530 aa14.19□□□□□ -0.14
GARNL3-210ENST00000453030 USP17L18D6R9N7 530 aa14.19□□□□□ -0.14
GARNL3-210ENST00000453030 USP17L22D6RA61 530 aa14.19□□□□□ -0.14
GARNL3-210ENST00000453030 USP17L17D6RBQ6 530 aa14.19□□□□□ -0.14
GARNL3-210ENST00000453030 USP17L19D6RCP7 530 aa14.19□□□□□ -0.14
GARNL3-210ENST00000453030 USP17L20D6RJB6 530 aa14.19□□□□□ -0.14
GARNL3-210ENST00000453030 SYN1P17600 705 aa14.19□□□□□ -0.14
GARNL3-210ENST00000453030 CCND3P30281 292 aaPredicted RBP14.19□□□□□ -0.14
GARNL3-210ENST00000453030 SHMT1P34896 483 aa14.19□□□□□ -0.14
GARNL3-210ENST00000453030 PLCD1P51178 756 aa14.19□□□□□ -0.14
GARNL3-210ENST00000453030 CACNB2Q08289 660 aaPredicted RBP14.19□□□□□ -0.14
GARNL3-210ENST00000453030 USP17L24Q0WX57 530 aa14.19□□□□□ -0.14
GARNL3-210ENST00000453030 TTC6Q86TZ1 520 aa14.19□□□□□ -0.14
GARNL3-210ENST00000453030 LRCH3Q96II8 777 aa14.19□□□□□ -0.14
GARNL3-210ENST00000453030 ZNF236Q9UL36 1845 aa14.19□□□□□ -0.14
GARNL3-210ENST00000453030 ZNFX1Q9P2E3 1918 aaKnown RBP14.18□□□□□ -0.14
GARNL3-210ENST00000453030 MAGEB6P1A0A0J9YX57 407 aa14.18□□□□□ -0.14
GARNL3-210ENST00000453030 CNMDO75829 334 aa14.18□□□□□ -0.14
GARNL3-210ENST00000453030 POLR3DP05423 398 aaPredicted RBP14.18□□□□□ -0.14
GARNL3-210ENST00000453030 USP14P54578 494 aa14.18□□□□□ -0.14
GARNL3-210ENST00000453030 EVX2Q03828 476 aa14.18□□□□□ -0.14
GARNL3-210ENST00000453030 MORN1Q5T089 497 aa14.18□□□□□ -0.14
GARNL3-210ENST00000453030 TRMT44Q8IYL2 757 aaKnown RBP14.18□□□□□ -0.14
GARNL3-210ENST00000453030 MIER1Q8N108 512 aa14.18□□□□□ -0.14
GARNL3-210ENST00000453030 USP6NLQ92738 828 aa14.18□□□□□ -0.14
GARNL3-210ENST00000453030 DNAJC2Q99543 621 aaKnown RBP14.18□□□□□ -0.14
GARNL3-210ENST00000453030 RIOK1Q9BRS2 568 aaKnown RBP14.18□□□□□ -0.14
GARNL3-210ENST00000453030 KIAA1683Q9H0B3 1180 aa14.18□□□□□ -0.14
GARNL3-210ENST00000453030 CABP5Q9NP86 173 aa14.18□□□□□ -0.14
GARNL3-210ENST00000453030 RABGAP1Q9Y3P9 1069 aa14.18□□□□□ -0.14
GARNL3-210ENST00000453030 MPHOSPH10O00566 681 aaKnown RBP14.17□□□□□ -0.14
GARNL3-210ENST00000453030 PDE6AP16499 860 aa14.17□□□□□ -0.14
GARNL3-210ENST00000453030 CCNA1P78396 465 aa14.17□□□□□ -0.14
GARNL3-210ENST00000453030 MAP2K5Q13163 448 aa14.17□□□□□ -0.14
GARNL3-210ENST00000453030 SLC9C2Q5TAH2 1124 aa14.17□□□□□ -0.14
GARNL3-210ENST00000453030 RHPN1Q8TCX5 695 aa14.17□□□□□ -0.14
GARNL3-210ENST00000453030 GDF15Q99988 308 aa14.17□□□□□ -0.14
GARNL3-210ENST00000453030 RPAP3Q9H6T3 665 aaPredicted RBP14.17□□□□□ -0.14
GARNL3-210ENST00000453030 ZNF532Q9HCE3 1301 aa14.16□□□□□ -0.14
GARNL3-210ENST00000453030 PLXNA1Q9UIW2 1896 aa14.16□□□□□ -0.14
GARNL3-210ENST00000453030 SPDYE16A6NNV3 312 aaPredicted RBP14.16□□□□□ -0.14
GARNL3-210ENST00000453030 GOLIM4O00461 696 aa14.16□□□□□ -0.14
GARNL3-210ENST00000453030 GUCY1A2P33402 732 aa14.16□□□□□ -0.14
GARNL3-210ENST00000453030 MAGEA10P43363 369 aaPredicted RBP14.16□□□□□ -0.14
GARNL3-210ENST00000453030 SEPT2Q15019 361 aa14.16□□□□□ -0.14
GARNL3-210ENST00000453030 TTF1Q15361 905 aaPredicted RBP14.16□□□□□ -0.14
GARNL3-210ENST00000453030 HSP90AB4PQ58FF6 505 aa14.16□□□□□ -0.14
GARNL3-210ENST00000453030 CATSPERGQ6ZRH7 1159 aa14.16□□□□□ -0.14
GARNL3-210ENST00000453030 SDR42E1Q8WUS8 393 aa14.16□□□□□ -0.14
GARNL3-210ENST00000453030 CRNKL1Q9BZJ0 848 aaKnown RBP14.16□□□□□ -0.14
GARNL3-210ENST00000453030 MCM9Q9NXL9 1143 aa14.16□□□□□ -0.14
GARNL3-210ENST00000453030 BTBD7Q9P203 1132 aa14.16□□□□□ -0.14
GARNL3-210ENST00000453030 ZBED9Q6R2W3 1325 aa14.15□□□□□ -0.14
GARNL3-210ENST00000453030 A0A0C4DFX4 3053 aa14.15□□□□□ -0.14
GARNL3-210ENST00000453030 GLRX3O76003 335 aaKnown RBP14.15□□□□□ -0.14
GARNL3-210ENST00000453030 CYP2D6P10635 497 aa14.15□□□□□ -0.14
GARNL3-210ENST00000453030 GABPAQ06546 454 aa14.15□□□□□ -0.14
GARNL3-210ENST00000453030 TMED8Q6PL24 325 aaPredicted RBP14.15□□□□□ -0.14
GARNL3-210ENST00000453030 CLASRPQ8N2M8 674 aaKnown RBP14.15□□□□□ -0.14
GARNL3-210ENST00000453030 LCORLQ8N3X6 602 aa14.15□□□□□ -0.14
GARNL3-210ENST00000453030 SLC44A5Q8NCS7 719 aa14.15□□□□□ -0.14
GARNL3-210ENST00000453030 EDC3Q96F86 508 aaKnown RBP14.15□□□□□ -0.14
GARNL3-210ENST00000453030 TANGO6Q9C0B7 1094 aa14.15□□□□□ -0.14
GARNL3-210ENST00000453030 FLRT1Q9NZU1 646 aa14.15□□□□□ -0.14
GARNL3-210ENST00000453030 IVNS1ABPQ9Y6Y0 642 aa14.15□□□□□ -0.14
GARNL3-210ENST00000453030 LTBP2Q14767 1821 aa14.15□□□□□ -0.14
GARNL3-210ENST00000453030 IFIT2P09913 472 aaKnown RBP14.14□□□□□ -0.15
GARNL3-210ENST00000453030 GRB14Q14449 540 aa14.14□□□□□ -0.15
GARNL3-210ENST00000453030 MFSD14CQ5VZR4 134 aa14.14□□□□□ -0.15
GARNL3-210ENST00000453030 LHX8Q68G74 356 aa14.14□□□□□ -0.15
GARNL3-210ENST00000453030 KIF1BPQ96EK5 621 aa14.14□□□□□ -0.15
GARNL3-210ENST00000453030 A0A1W2PRG0 241 aa14.13□□□□□ -0.15
GARNL3-210ENST00000453030 TCRBV5S4A2TA0A5A2 114 aa14.13□□□□□ -0.15
GARNL3-210ENST00000453030 SLC15A5A6NIM6 579 aa14.13□□□□□ -0.15
GARNL3-210ENST00000453030 COL6A1P12109 1028 aa14.13□□□□□ -0.15
GARNL3-210ENST00000453030 PTPREP23469 700 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms