RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 MAGEB6Q8N7X4 407 aa10.79□□□□□ -0.68
DEPDC1B-202ENST00000453022 NUDT12Q9BQG2 462 aa10.79□□□□□ -0.68
DEPDC1B-202ENST00000453022 PAGR1Q9BTK6 254 aa10.79□□□□□ -0.68
DEPDC1B-202ENST00000453022 NBPF3Q9H094 633 aa10.79□□□□□ -0.68
DEPDC1B-202ENST00000453022 C11orf49Q9H6J7 331 aa10.79□□□□□ -0.68
DEPDC1B-202ENST00000453022 ANTXR1Q9H6X2 564 aa10.79□□□□□ -0.68
DEPDC1B-202ENST00000453022 ZMYND8Q9ULU4 1186 aaPredicted RBP10.79□□□□□ -0.68
DEPDC1B-202ENST00000453022 COL11A1P12107 1806 aaPredicted RBP10.79□□□□□ -0.68
DEPDC1B-202ENST00000453022 LTBP2Q14767 1821 aa10.79□□□□□ -0.68
DEPDC1B-202ENST00000453022 CNMDO75829 334 aa10.78□□□□□ -0.68
DEPDC1B-202ENST00000453022 MAPK4P31152 587 aa10.78□□□□□ -0.68
DEPDC1B-202ENST00000453022 CACNB2Q08289 660 aaPredicted RBP10.78□□□□□ -0.68
DEPDC1B-202ENST00000453022 ZYXQ15942 572 aaKnown RBP10.78□□□□□ -0.68
DEPDC1B-202ENST00000453022 USP17L2Q6R6M4 530 aa10.78□□□□□ -0.68
DEPDC1B-202ENST00000453022 GPR142Q7Z601 462 aa10.78□□□□□ -0.68
DEPDC1B-202ENST00000453022 ITPRIPQ8IWB1 547 aa10.78□□□□□ -0.68
DEPDC1B-202ENST00000453022 C12orf42Q96LP6 360 aa10.78□□□□□ -0.68
DEPDC1B-202ENST00000453022 EHD4Q9H223 541 aa10.78□□□□□ -0.68
DEPDC1B-202ENST00000453022 ZKSCAN1P17029 563 aaPredicted RBP10.77□□□□□ -0.68
DEPDC1B-202ENST00000453022 SYN1P17600 705 aa10.77□□□□□ -0.68
DEPDC1B-202ENST00000453022 CCND3P30281 292 aaPredicted RBP10.77□□□□□ -0.68
DEPDC1B-202ENST00000453022 BMP8BP34820 402 aa10.77□□□□□ -0.68
DEPDC1B-202ENST00000453022 USP5P45974 858 aa10.77□□□□□ -0.68
DEPDC1B-202ENST00000453022 PDE3AQ14432 1141 aa10.77□□□□□ -0.68
DEPDC1B-202ENST00000453022 CEP85Q6P2H3 762 aa10.77□□□□□ -0.68
DEPDC1B-202ENST00000453022 FTSJ3Q8IY81 847 aaKnown RBP10.77□□□□□ -0.68
DEPDC1B-202ENST00000453022 SERPINB13Q9UIV8 391 aa10.77□□□□□ -0.68
DEPDC1B-202ENST00000453022 COL6A1P12109 1028 aa10.77□□□□□ -0.69
DEPDC1B-202ENST00000453022 SHMT1P34896 483 aa10.77□□□□□ -0.69
DEPDC1B-202ENST00000453022 EVX2Q03828 476 aa10.77□□□□□ -0.69
DEPDC1B-202ENST00000453022 LHX8Q68G74 356 aa10.77□□□□□ -0.69
DEPDC1B-202ENST00000453022 PLEKHH3Q7Z736 793 aa10.77□□□□□ -0.69
DEPDC1B-202ENST00000453022 CERS3Q8IU89 383 aa10.77□□□□□ -0.69
DEPDC1B-202ENST00000453022 ACER1Q8TDN7 264 aa10.77□□□□□ -0.69
DEPDC1B-202ENST00000453022 GTF3C2Q8WUA4 911 aaPredicted RBP10.77□□□□□ -0.69
DEPDC1B-202ENST00000453022 FEZ1Q99689 392 aa10.77□□□□□ -0.69
DEPDC1B-202ENST00000453022 APBA2Q99767 749 aa10.77□□□□□ -0.69
DEPDC1B-202ENST00000453022 RIOK1Q9BRS2 568 aaKnown RBP10.77□□□□□ -0.69
DEPDC1B-202ENST00000453022 EXOC6BQ9Y2D4 811 aa10.77□□□□□ -0.69
DEPDC1B-202ENST00000453022 ZNFX1Q9P2E3 1918 aaKnown RBP10.77□□□□□ -0.69
DEPDC1B-202ENST00000453022 VCAM1P19320 739 aa10.76□□□□□ -0.69
DEPDC1B-202ENST00000453022 GUCY1A2P33402 732 aa10.76□□□□□ -0.69
DEPDC1B-202ENST00000453022 RGS2P41220 211 aa10.76□□□□□ -0.69
DEPDC1B-202ENST00000453022 MAGEA10P43363 369 aaPredicted RBP10.76□□□□□ -0.69
DEPDC1B-202ENST00000453022 PLCD1P51178 756 aa10.76□□□□□ -0.69
DEPDC1B-202ENST00000453022 RAB3GAP1Q15042 981 aa10.76□□□□□ -0.69
DEPDC1B-202ENST00000453022 CATSPERGQ6ZRH7 1159 aa10.76□□□□□ -0.69
DEPDC1B-202ENST00000453022 TRMT44Q8IYL2 757 aaKnown RBP10.76□□□□□ -0.69
DEPDC1B-202ENST00000453022 KIAA1683Q9H0B3 1180 aa10.76□□□□□ -0.69
DEPDC1B-202ENST00000453022 FLRT1Q9NZU1 646 aa10.76□□□□□ -0.69
DEPDC1B-202ENST00000453022 RABGAP1Q9Y3P9 1069 aa10.76□□□□□ -0.69
DEPDC1B-202ENST00000453022 PLXNA1Q9UIW2 1896 aa10.76□□□□□ -0.69
DEPDC1B-202ENST00000453022 USP17L15C9J2P7 530 aa10.75□□□□□ -0.69
DEPDC1B-202ENST00000453022 USP17L13C9JLJ4 530 aa10.75□□□□□ -0.69
DEPDC1B-202ENST00000453022 USP17L11C9JVI0 530 aa10.75□□□□□ -0.69
DEPDC1B-202ENST00000453022 USP17L18D6R9N7 530 aa10.75□□□□□ -0.69
DEPDC1B-202ENST00000453022 USP17L22D6RA61 530 aa10.75□□□□□ -0.69
DEPDC1B-202ENST00000453022 USP17L17D6RBQ6 530 aa10.75□□□□□ -0.69
DEPDC1B-202ENST00000453022 USP17L19D6RCP7 530 aa10.75□□□□□ -0.69
DEPDC1B-202ENST00000453022 USP17L20D6RJB6 530 aa10.75□□□□□ -0.69
DEPDC1B-202ENST00000453022 USP17L24Q0WX57 530 aa10.75□□□□□ -0.69
DEPDC1B-202ENST00000453022 MAP3K12Q12852 859 aa10.75□□□□□ -0.69
DEPDC1B-202ENST00000453022 MAP2K5Q13163 448 aa10.75□□□□□ -0.69
DEPDC1B-202ENST00000453022 ABCB5Q2M3G0 1257 aa10.75□□□□□ -0.69
DEPDC1B-202ENST00000453022 CERKLQ49MI3 558 aaPredicted RBP10.75□□□□□ -0.69
DEPDC1B-202ENST00000453022 LBX2Q6XYB7 198 aa10.75□□□□□ -0.69
DEPDC1B-202ENST00000453022 AACSQ86V21 672 aa10.75□□□□□ -0.69
DEPDC1B-202ENST00000453022 BTBD7Q9P203 1132 aa10.75□□□□□ -0.69
DEPDC1B-202ENST00000453022 SPDYE16A6NNV3 312 aaPredicted RBP10.74□□□□□ -0.69
DEPDC1B-202ENST00000453022 HNRNPUQ00839 825 aaKnown RBP eCLIP10.74□□□□□ -0.69
DEPDC1B-202ENST00000453022 GABPAQ06546 454 aa10.74□□□□□ -0.69
DEPDC1B-202ENST00000453022 LRRC26Q2I0M4 334 aa10.74□□□□□ -0.69
DEPDC1B-202ENST00000453022 TMED8Q6PL24 325 aaPredicted RBP10.74□□□□□ -0.69
DEPDC1B-202ENST00000453022 TTC6Q86TZ1 520 aa10.74□□□□□ -0.69
DEPDC1B-202ENST00000453022 CCAR1Q8IX12 1150 aaKnown RBP10.74□□□□□ -0.69
DEPDC1B-202ENST00000453022 IL1RAPL2Q9NP60 686 aa10.74□□□□□ -0.69
DEPDC1B-202ENST00000453022 PRUNE2Q8WUY3 3088 aa10.74□□□□□ -0.69
DEPDC1B-202ENST00000453022 CDH23Q9H251 3354 aa10.74□□□□□ -0.69
DEPDC1B-202ENST00000453022 IGHA2P01877 340 aa10.73□□□□□ -0.69
DEPDC1B-202ENST00000453022 PDE6AP16499 860 aa10.73□□□□□ -0.69
DEPDC1B-202ENST00000453022 PTPREP23469 700 aa10.73□□□□□ -0.69
DEPDC1B-202ENST00000453022 USP14P54578 494 aa10.73□□□□□ -0.69
DEPDC1B-202ENST00000453022 GRB14Q14449 540 aa10.73□□□□□ -0.69
DEPDC1B-202ENST00000453022 SEPT2Q15019 361 aa10.73□□□□□ -0.69
DEPDC1B-202ENST00000453022 ERC1Q8IUD2 1116 aa10.73□□□□□ -0.69
DEPDC1B-202ENST00000453022 PANK1Q8TE04 598 aa10.73□□□□□ -0.69
DEPDC1B-202ENST00000453022 GREB1LQ9C091 1923 aaPredicted RBP10.73□□□□□ -0.69
DEPDC1B-202ENST00000453022 RPAP3Q9H6T3 665 aaPredicted RBP10.73□□□□□ -0.69
DEPDC1B-202ENST00000453022 MAGEB6P1A0A0J9YX57 407 aa10.73□□□□□ -0.69
DEPDC1B-202ENST00000453022 A0A1W2PRG0 241 aa10.73□□□□□ -0.69
DEPDC1B-202ENST00000453022 TCRBV5S4A2TA0A5A2 114 aa10.73□□□□□ -0.69
DEPDC1B-202ENST00000453022 SLC15A5A6NIM6 579 aa10.73□□□□□ -0.69
DEPDC1B-202ENST00000453022 HOXC6P09630 235 aa10.73□□□□□ -0.69
DEPDC1B-202ENST00000453022 CCNA1P78396 465 aa10.73□□□□□ -0.69
DEPDC1B-202ENST00000453022 LRIT3Q3SXY7 679 aa10.73□□□□□ -0.69
DEPDC1B-202ENST00000453022 WDR78Q5VTH9 848 aa10.73□□□□□ -0.69
DEPDC1B-202ENST00000453022 Q7L0L9 218 aa10.73□□□□□ -0.69
DEPDC1B-202ENST00000453022 TDHQ8IZJ6 230 aa10.73□□□□□ -0.69
DEPDC1B-202ENST00000453022 NPLOC4Q8TAT6 608 aa10.73□□□□□ -0.69
DEPDC1B-202ENST00000453022 RHPN1Q8TCX5 695 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 628.3 ms