RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 NID2Q14112 1375 aa13.55□□□□□ -0.24
VTA1-203ENST00000452973 PPP2R5BQ15173 497 aa13.55□□□□□ -0.24
VTA1-203ENST00000452973 RILPL1Q5EBL4 403 aa13.55□□□□□ -0.24
VTA1-203ENST00000452973 ZNF622Q969S3 477 aaKnown RBP eCLIP13.55□□□□□ -0.242e-6■■■□□ 15.2
VTA1-203ENST00000452973 MKRN1Q9UHC7 482 aaKnown RBP13.55□□□□□ -0.24
VTA1-203ENST00000452973 CCDC88AQ3V6T2 1871 aa13.54□□□□□ -0.24
VTA1-203ENST00000452973 BRWD3Q6RI45 1802 aa13.54□□□□□ -0.24
VTA1-203ENST00000452973 PRPF3O43395 683 aaKnown RBP13.54□□□□□ -0.24
VTA1-203ENST00000452973 DDAH1O94760 285 aa13.54□□□□□ -0.24
VTA1-203ENST00000452973 PTGS1P23219 599 aa13.54□□□□□ -0.24
VTA1-203ENST00000452973 KRT2P35908 639 aa13.54□□□□□ -0.24
VTA1-203ENST00000452973 PNOCQ13519 176 aa13.54□□□□□ -0.24
VTA1-203ENST00000452973 DNTTIP2Q5QJE6 756 aaKnown RBP13.54□□□□□ -0.24
VTA1-203ENST00000452973 STAG2Q8N3U4 1231 aa13.54□□□□□ -0.24
VTA1-203ENST00000452973 PNMA1Q8ND90 353 aa13.54□□□□□ -0.24
VTA1-203ENST00000452973 ZC3H12CQ9C0D7 883 aaKnown RBP13.54□□□□□ -0.24
VTA1-203ENST00000452973 KCNH3Q9ULD8 1083 aa13.54□□□□□ -0.24
VTA1-203ENST00000452973 IL1R1P14778 569 aa13.54□□□□□ -0.24
VTA1-203ENST00000452973 HOXA10P31260 410 aaPredicted RBP13.54□□□□□ -0.24
VTA1-203ENST00000452973 ZNF75DP51815 510 aa13.54□□□□□ -0.24
VTA1-203ENST00000452973 LONRF3Q496Y0 759 aa13.54□□□□□ -0.24
VTA1-203ENST00000452973 NLGN1Q8N2Q7 840 aa13.54□□□□□ -0.24
VTA1-203ENST00000452973 CNNM3Q8NE01 707 aa13.54□□□□□ -0.24
VTA1-203ENST00000452973 CRAMP1Q96RY5 1269 aa13.54□□□□□ -0.24
VTA1-203ENST00000452973 ECM29Q5VYK3 1845 aa13.54□□□□□ -0.24
VTA1-203ENST00000452973 ZNF500O60304 480 aaPredicted RBP13.53□□□□□ -0.24
VTA1-203ENST00000452973 CUTAO60888 179 aa13.53□□□□□ -0.24
VTA1-203ENST00000452973 GOLGA8HP0CJ92 632 aa13.53□□□□□ -0.24
VTA1-203ENST00000452973 NLRP5P59047 1200 aa13.53□□□□□ -0.24
VTA1-203ENST00000452973 RASGRP2Q7LDG7 609 aa13.53□□□□□ -0.24
VTA1-203ENST00000452973 GOLGA6L6A8MZA4 724 aa13.53□□□□□ -0.24
VTA1-203ENST00000452973 SCNN1DP51172 638 aa13.53□□□□□ -0.24
VTA1-203ENST00000452973 CCDC186Q7Z3E2 898 aa13.53□□□□□ -0.24
VTA1-203ENST00000452973 DHX40Q8IX18 779 aaKnown RBP13.53□□□□□ -0.24
VTA1-203ENST00000452973 GPKOWQ92917 476 aaPredicted RBP eCLIP13.53□□□□□ -0.24
VTA1-203ENST00000452973 NAT10Q9H0A0 1025 aaKnown RBP13.53□□□□□ -0.24
VTA1-203ENST00000452973 CPVLQ9H3G5 476 aa13.53□□□□□ -0.24
VTA1-203ENST00000452973 FOXN1O15353 648 aa13.53□□□□□ -0.24
VTA1-203ENST00000452973 CAVIN2O95810 425 aa13.53□□□□□ -0.24
VTA1-203ENST00000452973 RBM6P78332 1123 aaKnown RBP13.53□□□□□ -0.24
VTA1-203ENST00000452973 ZNF174Q15697 407 aa13.53□□□□□ -0.24
VTA1-203ENST00000452973 RESP18Q5W5W9 173 aa13.53□□□□□ -0.24
VTA1-203ENST00000452973 USP49Q70CQ1 688 aa13.53□□□□□ -0.24
VTA1-203ENST00000452973 PHF20Q9BVI0 1012 aa13.53□□□□□ -0.24
VTA1-203ENST00000452973 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.53□□□□□ -0.24
VTA1-203ENST00000452973 CLIP2Q9UDT6 1046 aa13.53□□□□□ -0.24
VTA1-203ENST00000452973 R3HCC1Q9Y3T6 440 aaKnown RBP13.53□□□□□ -0.24
VTA1-203ENST00000452973 CNTNAP5Q8WYK1 1306 aa13.52□□□□□ -0.24
VTA1-203ENST00000452973 WNT7AO00755 349 aa13.52□□□□□ -0.24
VTA1-203ENST00000452973 SRGNP10124 158 aa13.52□□□□□ -0.24
VTA1-203ENST00000452973 PPP4CP60510 307 aa13.52□□□□□ -0.24
VTA1-203ENST00000452973 C15orf52Q6ZUT6 534 aaKnown RBP13.52□□□□□ -0.24
VTA1-203ENST00000452973 BRMS1Q9HCU9 246 aa13.52□□□□□ -0.24
VTA1-203ENST00000452973 PODXL2Q9NZ53 605 aa13.52□□□□□ -0.24
VTA1-203ENST00000452973 PARP3Q9Y6F1 533 aa13.52□□□□□ -0.24
VTA1-203ENST00000452973 POLR2DO15514 142 aaKnown RBP13.52□□□□□ -0.25
VTA1-203ENST00000452973 KIF5BP33176 963 aa13.52□□□□□ -0.25
VTA1-203ENST00000452973 DPP8Q6V1X1 898 aaPredicted RBP13.52□□□□□ -0.25
VTA1-203ENST00000452973 SP8Q8IXZ3 490 aa13.52□□□□□ -0.25
VTA1-203ENST00000452973 TRIM75PA6NK02 468 aa13.51□□□□□ -0.25
VTA1-203ENST00000452973 ADAMTS3O15072 1205 aa13.51□□□□□ -0.25
VTA1-203ENST00000452973 SCG2P13521 617 aa13.51□□□□□ -0.25
VTA1-203ENST00000452973 PIK3AP1Q6ZUJ8 805 aa13.51□□□□□ -0.25
VTA1-203ENST00000452973 RGS22Q8NE09 1264 aa13.51□□□□□ -0.25
VTA1-203ENST00000452973 TMX4Q9H1E5 349 aaPredicted RBP13.51□□□□□ -0.25
VTA1-203ENST00000452973 KCNF1Q9H3M0 494 aa13.51□□□□□ -0.25
VTA1-203ENST00000452973 HPSEQ9Y251 543 aa13.51□□□□□ -0.25
VTA1-203ENST00000452973 ATP6V0A2Q9Y487 856 aa13.51□□□□□ -0.25
VTA1-203ENST00000452973 FLT1P17948 1338 aa13.51□□□□□ -0.25
VTA1-203ENST00000452973 GPR75-ASB3A0A0A6YYF3 556 aa13.51□□□□□ -0.25
VTA1-203ENST00000452973 CDK8P49336 464 aa13.51□□□□□ -0.25
VTA1-203ENST00000452973 LRMPQ12912 555 aa13.51□□□□□ -0.25
VTA1-203ENST00000452973 GRAMD1CQ8IYS0 662 aa13.51□□□□□ -0.25
VTA1-203ENST00000452973 CSRNP2Q9H175 543 aa13.51□□□□□ -0.25
VTA1-203ENST00000452973 FAM13BQ9NYF5 915 aa13.51□□□□□ -0.25
VTA1-203ENST00000452973 FBXO2Q9UK22 296 aaPredicted RBP13.51□□□□□ -0.25
VTA1-203ENST00000452973 MYH6P13533 1939 aa13.51□□□□□ -0.25
VTA1-203ENST00000452973 RASA1P20936 1047 aa13.51□□□□□ -0.25
VTA1-203ENST00000452973 PLA2G4DQ86XP0 818 aa13.51□□□□□ -0.25
VTA1-203ENST00000452973 EYA3Q99504 573 aa13.51□□□□□ -0.25
VTA1-203ENST00000452973 PYCARDQ9ULZ3 195 aa13.51□□□□□ -0.25
VTA1-203ENST00000452973 OFD1O75665 1012 aa13.5□□□□□ -0.25
VTA1-203ENST00000452973 PTPREP23469 700 aa13.5□□□□□ -0.25
VTA1-203ENST00000452973 FILIP1Q7Z7B0 1213 aa13.5□□□□□ -0.25
VTA1-203ENST00000452973 RASGRP4Q8TDF6 673 aa13.5□□□□□ -0.25
VTA1-203ENST00000452973 TBC1D22AQ8WUA7 517 aa13.5□□□□□ -0.25
VTA1-203ENST00000452973 DBNDD1Q9H9R9 158 aa13.5□□□□□ -0.25
VTA1-203ENST00000452973 TTF2Q9UNY4 1162 aaKnown RBP13.5□□□□□ -0.25
VTA1-203ENST00000452973 EIF6P56537 245 aaKnown RBP13.5□□□□□ -0.25
VTA1-203ENST00000452973 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.5□□□□□ -0.25
VTA1-203ENST00000452973 KRBA2Q6ZNG9 492 aa13.5□□□□□ -0.25
VTA1-203ENST00000452973 METTL16Q86W50 562 aaKnown RBP13.5□□□□□ -0.25
VTA1-203ENST00000452973 DGKHQ86XP1 1220 aa13.5□□□□□ -0.25
VTA1-203ENST00000452973 TMEM47Q9BQJ4 181 aa13.5□□□□□ -0.25
VTA1-203ENST00000452973 VAT1LQ9HCJ6 419 aa13.5□□□□□ -0.25
VTA1-203ENST00000452973 KCNQ5Q9NR82 932 aa13.5□□□□□ -0.25
VTA1-203ENST00000452973 SERTAD1Q9UHV2 236 aa13.5□□□□□ -0.25
VTA1-203ENST00000452973 CEP131Q9UPN4 1083 aa13.5□□□□□ -0.25
VTA1-203ENST00000452973 DAGLAQ9Y4D2 1042 aa13.5□□□□□ -0.25
VTA1-203ENST00000452973 NPR1P16066 1061 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms