RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 KBTBD3Q8NAB2 608 aa15.04■□□□□ -0
CPSF4-208ENST00000452047 GPATCH3Q96I76 525 aa15.04■□□□□ -0
CPSF4-208ENST00000452047 CABP5Q9NP86 173 aa15.04■□□□□ -0
CPSF4-208ENST00000452047 RBPJLQ9UBG7 517 aa15.04■□□□□ -0
CPSF4-208ENST00000452047 INHAP05111 366 aa15.03■□□□□ -0
CPSF4-208ENST00000452047 GJB1P08034 283 aa15.03■□□□□ -0
CPSF4-208ENST00000452047 VCAM1P19320 739 aa15.03■□□□□ -0
CPSF4-208ENST00000452047 USP14P54578 494 aa15.03■□□□□ -0
CPSF4-208ENST00000452047 UBXN2AP68543 259 aa15.03■□□□□ -0
CPSF4-208ENST00000452047 C12orf60Q5U649 245 aa15.03■□□□□ -0
CPSF4-208ENST00000452047 DYNLL2Q96FJ2 89 aa15.03■□□□□ -0
CPSF4-208ENST00000452047 BIN2Q9UBW5 565 aaPredicted RBP15.03■□□□□ -0
CPSF4-208ENST00000452047 SWAP70Q9UH65 585 aa15.03■□□□□ -0
CPSF4-208ENST00000452047 GJD2Q9UKL4 321 aa15.03■□□□□ -0
CPSF4-208ENST00000452047 RLFQ13129 1914 aa15.03■□□□□ -0
CPSF4-208ENST00000452047 A0A0G2JMZ2 1700 aa15.03■□□□□ -0
CPSF4-208ENST00000452047 GREB1LQ9C091 1923 aaPredicted RBP15.02■□□□□ -0
CPSF4-208ENST00000452047 CYP2D7A0A087X1C5 515 aa15.02■□□□□ -0
CPSF4-208ENST00000452047 A0A1W2PRG0 241 aa15.02■□□□□ -0
CPSF4-208ENST00000452047 USP17L15C9J2P7 530 aa15.02■□□□□ -0
CPSF4-208ENST00000452047 USP17L13C9JLJ4 530 aa15.02■□□□□ -0
CPSF4-208ENST00000452047 USP17L12C9JPN9 530 aa15.02■□□□□ -0
CPSF4-208ENST00000452047 USP17L11C9JVI0 530 aa15.02■□□□□ -0
CPSF4-208ENST00000452047 USP17L21D6R901 530 aa15.02■□□□□ -0
CPSF4-208ENST00000452047 USP17L18D6R9N7 530 aa15.02■□□□□ -0
CPSF4-208ENST00000452047 USP17L22D6RA61 530 aa15.02■□□□□ -0
CPSF4-208ENST00000452047 USP17L17D6RBQ6 530 aa15.02■□□□□ -0
CPSF4-208ENST00000452047 USP17L19D6RCP7 530 aa15.02■□□□□ -0
CPSF4-208ENST00000452047 USP17L20D6RJB6 530 aa15.02■□□□□ -0
CPSF4-208ENST00000452047 GJA8P48165 433 aa15.02■□□□□ -0
CPSF4-208ENST00000452047 ERVK-9P63128 1117 aa15.02■□□□□ -0
CPSF4-208ENST00000452047 ERVK-24P63145 666 aa15.02■□□□□ -0
CPSF4-208ENST00000452047 USP17L24Q0WX57 530 aa15.02■□□□□ -0
CPSF4-208ENST00000452047 GPRC5AQ8NFJ5 357 aa15.02■□□□□ -0
CPSF4-208ENST00000452047 GTF3C2Q8WUA4 911 aaPredicted RBP15.02■□□□□ -0
CPSF4-208ENST00000452047 CRBNQ96SW2 442 aa15.02■□□□□ -0
CPSF4-208ENST00000452047 RNF208Q9H0X6 261 aa15.02■□□□□ -0
CPSF4-208ENST00000452047 UNC93B1Q9H1C4 597 aa15.02■□□□□ -0
CPSF4-208ENST00000452047 SLC4A4Q9Y6R1 1079 aa15.02■□□□□ -0
CPSF4-208ENST00000452047 PARP14Q460N5 1801 aa15.01□□□□□ -0.01
CPSF4-208ENST00000452047 TTC41PQ6P2S7 1318 aa15.01□□□□□ -0.01
CPSF4-208ENST00000452047 MPHOSPH10O00566 681 aaKnown RBP15.01□□□□□ -0.01
CPSF4-208ENST00000452047 Q3C1V9 767 aa15.01□□□□□ -0.01
CPSF4-208ENST00000452047 CATSPERGQ6ZRH7 1159 aa15.01□□□□□ -0.01
CPSF4-208ENST00000452047 TMEM179Q6ZVK1 233 aa15.01□□□□□ -0.01
CPSF4-208ENST00000452047 C16orf86Q6ZW13 317 aa15.01□□□□□ -0.01
CPSF4-208ENST00000452047 UBE2Q1Q7Z7E8 422 aa15.01□□□□□ -0.01
CPSF4-208ENST00000452047 NKX2-3Q8TAU0 364 aa15.01□□□□□ -0.01
CPSF4-208ENST00000452047 PI4K2BQ8TCG2 481 aa15.01□□□□□ -0.01
CPSF4-208ENST00000452047 OTUD7AQ8TE49 926 aaPredicted RBP15.01□□□□□ -0.01
CPSF4-208ENST00000452047 OSBP2Q969R2 916 aa15.01□□□□□ -0.01
CPSF4-208ENST00000452047 STRBPQ96SI9 672 aaKnown RBP15.01□□□□□ -0.01
CPSF4-208ENST00000452047 RANBP2P49792 3224 aaKnown RBP15□□□□□ -0.01
CPSF4-208ENST00000452047 SALL3Q9BXA9 1300 aa15□□□□□ -0.01
CPSF4-208ENST00000452047 CNMDO75829 334 aa15□□□□□ -0.01
CPSF4-208ENST00000452047 AKR1B1P15121 316 aa15□□□□□ -0.01
CPSF4-208ENST00000452047 CDK8P49336 464 aa15□□□□□ -0.01
CPSF4-208ENST00000452047 CTR9Q6PD62 1173 aa15□□□□□ -0.01
CPSF4-208ENST00000452047 LBX2Q6XYB7 198 aa15□□□□□ -0.01
CPSF4-208ENST00000452047 U2AF1L4Q8WU68 220 aaKnown RBP15□□□□□ -0.01
CPSF4-208ENST00000452047 APPBP2Q92624 585 aa15□□□□□ -0.01
CPSF4-208ENST00000452047 YTHDC1Q96MU7 727 aaKnown RBP15□□□□□ -0.01
CPSF4-208ENST00000452047 PAGR1Q9BTK6 254 aa15□□□□□ -0.01
CPSF4-208ENST00000452047 PORCNQ9H237 461 aa15□□□□□ -0.01
CPSF4-208ENST00000452047 PAK6Q9NQU5 681 aaPredicted RBP15□□□□□ -0.01
CPSF4-208ENST00000452047 CEP290O15078 2479 aa15□□□□□ -0.01
CPSF4-208ENST00000452047 RNF113AO15541 343 aaKnown RBP14.99□□□□□ -0.01
CPSF4-208ENST00000452047 HMGCRP04035 888 aa14.99□□□□□ -0.01
CPSF4-208ENST00000452047 ZFYP08048 801 aaPredicted RBP14.99□□□□□ -0.01
CPSF4-208ENST00000452047 MAPK4P31152 587 aa14.99□□□□□ -0.01
CPSF4-208ENST00000452047 CLEC10AQ8IUN9 316 aa14.99□□□□□ -0.01
CPSF4-208ENST00000452047 SIAH1Q8IUQ4 282 aa14.99□□□□□ -0.01
CPSF4-208ENST00000452047 AMOTL1Q8IY63 956 aa14.99□□□□□ -0.01
CPSF4-208ENST00000452047 SOCS4Q8WXH5 440 aa14.99□□□□□ -0.01
CPSF4-208ENST00000452047 DDRGK1Q96HY6 314 aa14.99□□□□□ -0.01
CPSF4-208ENST00000452047 CCDC17Q96LX7 622 aa14.99□□□□□ -0.01
CPSF4-208ENST00000452047 RPAP3Q9H6T3 665 aaPredicted RBP14.99□□□□□ -0.01
CPSF4-208ENST00000452047 ARPP21Q9UBL0 812 aaPredicted RBP14.99□□□□□ -0.01
CPSF4-208ENST00000452047 RABGAP1Q9Y3P9 1069 aa14.99□□□□□ -0.01
CPSF4-208ENST00000452047 ROBO3Q96MS0 1386 aa14.98□□□□□ -0.01
CPSF4-208ENST00000452047 SPDYE16A6NNV3 312 aaPredicted RBP14.98□□□□□ -0.01
CPSF4-208ENST00000452047 GSG1L2A8MUP6 293 aa14.98□□□□□ -0.01
CPSF4-208ENST00000452047 ERC2O15083 957 aa14.98□□□□□ -0.01
CPSF4-208ENST00000452047 GLRX3O76003 335 aaKnown RBP14.98□□□□□ -0.01
CPSF4-208ENST00000452047 SGPL1O95470 568 aa14.98□□□□□ -0.01
CPSF4-208ENST00000452047 KIAA1755Q5JYT7 1200 aa14.98□□□□□ -0.01
CPSF4-208ENST00000452047 GIMAP6Q6P9H5 292 aa14.98□□□□□ -0.01
CPSF4-208ENST00000452047 TRIB2Q92519 343 aa14.98□□□□□ -0.01
CPSF4-208ENST00000452047 USP6NLQ92738 828 aa14.98□□□□□ -0.01
CPSF4-208ENST00000452047 M0R2C6 588 aa14.97□□□□□ -0.01
CPSF4-208ENST00000452047 GPAA1O43292 621 aa14.97□□□□□ -0.01
CPSF4-208ENST00000452047 XRCC5P13010 732 aaKnown RBP14.97□□□□□ -0.01
CPSF4-208ENST00000452047 MX1P20591 662 aa14.97□□□□□ -0.01
CPSF4-208ENST00000452047 ICA1Q05084 483 aa14.97□□□□□ -0.01
CPSF4-208ENST00000452047 TRIM32Q13049 653 aa14.97□□□□□ -0.01
CPSF4-208ENST00000452047 HDAC1Q13547 482 aaPredicted RBP14.97□□□□□ -0.01
CPSF4-208ENST00000452047 SBK1Q52WX2 424 aa14.97□□□□□ -0.01
CPSF4-208ENST00000452047 MORN1Q5T089 497 aa14.97□□□□□ -0.01
CPSF4-208ENST00000452047 GPR142Q7Z601 462 aa14.97□□□□□ -0.01
CPSF4-208ENST00000452047 NUDT12Q9BQG2 462 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms