RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 LMOD1P29536 600 aaPredicted RBP13.85□□□□□ -0.19
COL27A1-202ENST00000451716 USP49Q70CQ1 688 aa13.85□□□□□ -0.19
COL27A1-202ENST00000451716 METTL16Q86W50 562 aaKnown RBP13.85□□□□□ -0.19
COL27A1-202ENST00000451716 CNNM3Q8NE01 707 aa13.85□□□□□ -0.19
COL27A1-202ENST00000451716 MRFAP1L1Q96HT8 127 aa13.85□□□□□ -0.19
COL27A1-202ENST00000451716 GEMIN8Q9NWZ8 242 aaKnown RBP13.85□□□□□ -0.19
COL27A1-202ENST00000451716 DUOX1Q9NRD9 1551 aa13.85□□□□□ -0.19
COL27A1-202ENST00000451716 ZNF831Q5JPB2 1677 aa13.85□□□□□ -0.19
COL27A1-202ENST00000451716 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.85□□□□□ -0.19
COL27A1-202ENST00000451716 VEGFAP15692 232 aaPredicted RBP13.85□□□□□ -0.19
COL27A1-202ENST00000451716 RNF26Q9BY78 433 aaPredicted RBP13.85□□□□□ -0.19
COL27A1-202ENST00000451716 WNT7AO00755 349 aa13.85□□□□□ -0.19
COL27A1-202ENST00000451716 SMC2O95347 1197 aa13.85□□□□□ -0.19
COL27A1-202ENST00000451716 RBM6P78332 1123 aaKnown RBP13.85□□□□□ -0.19
COL27A1-202ENST00000451716 GRAMD1CQ8IYS0 662 aa13.85□□□□□ -0.19
COL27A1-202ENST00000451716 DYNLL2Q96FJ2 89 aa13.85□□□□□ -0.19
COL27A1-202ENST00000451716 TRIM34Q9BYJ4 488 aa13.85□□□□□ -0.19
COL27A1-202ENST00000451716 FBXO2Q9UK22 296 aaPredicted RBP13.85□□□□□ -0.19
COL27A1-202ENST00000451716 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.85□□□□□ -0.19
COL27A1-202ENST00000451716 TNRC6CQ9HCJ0 1690 aaKnown RBP13.84□□□□□ -0.19
COL27A1-202ENST00000451716 TSPY2A6NKD2 308 aa13.84□□□□□ -0.19
COL27A1-202ENST00000451716 POLR2DO15514 142 aaKnown RBP13.84□□□□□ -0.19
COL27A1-202ENST00000451716 FGRP09769 529 aa13.84□□□□□ -0.19
COL27A1-202ENST00000451716 ATP1A3P13637 1013 aa13.84□□□□□ -0.19
COL27A1-202ENST00000451716 CDC25BP30305 580 aa13.84□□□□□ -0.19
COL27A1-202ENST00000451716 GRAPQ13588 217 aa13.84□□□□□ -0.19
COL27A1-202ENST00000451716 NCAPHQ15003 741 aa13.84□□□□□ -0.19
COL27A1-202ENST00000451716 RILPL1Q5EBL4 403 aa13.84□□□□□ -0.19
COL27A1-202ENST00000451716 LRRC8AQ8IWT6 810 aa13.84□□□□□ -0.19
COL27A1-202ENST00000451716 GRAPLQ8TC17 118 aaPredicted RBP13.84□□□□□ -0.19
COL27A1-202ENST00000451716 IFNKQ9P0W0 207 aa13.84□□□□□ -0.19
COL27A1-202ENST00000451716 MTMR7Q9Y216 660 aa13.84□□□□□ -0.19
COL27A1-202ENST00000451716 IRS2Q9Y4H2 1338 aa13.84□□□□□ -0.19
COL27A1-202ENST00000451716 RGL2O15211 777 aa13.84□□□□□ -0.19
COL27A1-202ENST00000451716 KRBA2Q6ZNG9 492 aa13.84□□□□□ -0.19
COL27A1-202ENST00000451716 SRBD1Q8N5C6 995 aaKnown RBP13.84□□□□□ -0.19
COL27A1-202ENST00000451716 SH3RF3Q8TEJ3 882 aaPredicted RBP13.84□□□□□ -0.19
COL27A1-202ENST00000451716 C16orf45Q96MC5 204 aaPredicted RBP13.84□□□□□ -0.19
COL27A1-202ENST00000451716 TIGD1Q96MW7 591 aa13.84□□□□□ -0.19
COL27A1-202ENST00000451716 XPO4Q9C0E2 1151 aaKnown RBP13.84□□□□□ -0.19
COL27A1-202ENST00000451716 PCDHA5Q9Y5H7 936 aa13.84□□□□□ -0.19
COL27A1-202ENST00000451716 LDHBP07195 334 aaKnown RBP13.83□□□□□ -0.2
COL27A1-202ENST00000451716 RCAN1P53805 252 aa13.83□□□□□ -0.2
COL27A1-202ENST00000451716 PTPN21Q16825 1174 aa13.83□□□□□ -0.2
COL27A1-202ENST00000451716 PRR5LQ6MZQ0 368 aa13.83□□□□□ -0.2
COL27A1-202ENST00000451716 SEPT12Q8IYM1 358 aa13.83□□□□□ -0.2
COL27A1-202ENST00000451716 ATP8A2Q9NTI2 1148 aa13.83□□□□□ -0.2
COL27A1-202ENST00000451716 LOC102724159A0A0B4J2E5 919 aa13.83□□□□□ -0.2
COL27A1-202ENST00000451716 ADAMTS3O15072 1205 aa13.83□□□□□ -0.2
COL27A1-202ENST00000451716 PTPREP23469 700 aa13.83□□□□□ -0.2
COL27A1-202ENST00000451716 USP5P45974 858 aa13.83□□□□□ -0.2
COL27A1-202ENST00000451716 PWP2Q15269 919 aaKnown RBP13.83□□□□□ -0.2
COL27A1-202ENST00000451716 HSP90AA4PQ58FG1 418 aa13.83□□□□□ -0.2
COL27A1-202ENST00000451716 ZNF771Q7L3S4 317 aaPredicted RBP13.83□□□□□ -0.2
COL27A1-202ENST00000451716 TUBE1Q9UJT0 475 aa13.83□□□□□ -0.2
COL27A1-202ENST00000451716 MYH6P13533 1939 aa13.83□□□□□ -0.2
COL27A1-202ENST00000451716 FAM237AA0A1B0GTK4 181 aa13.82□□□□□ -0.2
COL27A1-202ENST00000451716 PRPF3O43395 683 aaKnown RBP13.82□□□□□ -0.2
COL27A1-202ENST00000451716 TMTC3Q6ZXV5 915 aa13.82□□□□□ -0.2
COL27A1-202ENST00000451716 SLC44A5Q8NCS7 719 aa13.82□□□□□ -0.2
COL27A1-202ENST00000451716 PHF20Q9BVI0 1012 aa13.82□□□□□ -0.2
COL27A1-202ENST00000451716 CSRNP2Q9H175 543 aa13.82□□□□□ -0.2
COL27A1-202ENST00000451716 YY1AP1Q9H869 796 aa13.82□□□□□ -0.2
COL27A1-202ENST00000451716 SERTAD1Q9UHV2 236 aa13.82□□□□□ -0.2
COL27A1-202ENST00000451716 AFF2P51816 1311 aa13.82□□□□□ -0.2
COL27A1-202ENST00000451716 COL24A1Q17RW2 1714 aa13.82□□□□□ -0.2
COL27A1-202ENST00000451716 BMP6P22004 513 aa13.82□□□□□ -0.2
COL27A1-202ENST00000451716 GPSM2P81274 684 aa13.82□□□□□ -0.2
COL27A1-202ENST00000451716 ZNF827Q17R98 1081 aa13.82□□□□□ -0.2
COL27A1-202ENST00000451716 SAP30BPQ9UHR5 308 aaKnown RBP13.82□□□□□ -0.2
COL27A1-202ENST00000451716 ORC4O43929 436 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 XBP1P17861 261 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 KRT2P35908 639 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 TFAP4Q01664 338 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 CTCFLQ8NI51 663 aaPredicted RBP13.81□□□□□ -0.2
COL27A1-202ENST00000451716 TGFBRAP1Q8WUH2 860 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 BPIFA3Q9BQP9 254 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 HSD3B7Q9H2F3 369 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 ARPP21Q9UBL0 812 aaPredicted RBP13.81□□□□□ -0.2
COL27A1-202ENST00000451716 PDS5AQ29RF7 1337 aaKnown RBP13.81□□□□□ -0.2
COL27A1-202ENST00000451716 NHSQ6T4R5 1651 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 USP27XA6NNY8 438 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 PDE4BQ07343 736 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 ZNF174Q15697 407 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 RCSD1Q6JBY9 416 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 RPGRQ92834 1020 aaKnown RBP13.81□□□□□ -0.2
COL27A1-202ENST00000451716 EPSTI1Q96J88 318 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 CNTNAP5Q8WYK1 1306 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 USP17L3A6NCW0 530 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 USP17L4A6NCW7 530 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 TRIM75PA6NK02 468 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 UFL1O94874 794 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 SKILP12757 684 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 PPP2R5BQ15173 497 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 NPY5RQ15761 445 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 SPTY2D1Q68D10 685 aaPredicted RBP13.81□□□□□ -0.2
COL27A1-202ENST00000451716 USP17L1Q7RTZ2 530 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 TMC6Q7Z403 805 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 EGFL6Q8IUX8 553 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 MAPKAPK5Q8IW41 473 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms