RNA–Protein interactions for RNA: ENST00000451349.1

SSXP4-201, Transcript of SSX family pseudogene 4, humanhuman

BASIC

Gene SSXP4, Length 245 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP4-201ENST00000451349 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.28□□□□□ -1.72
SSXP4-201ENST00000451349 HP1BP3Q5SSJ5 553 aaPredicted RBP4.28□□□□□ -1.72
SSXP4-201ENST00000451349 EFCAB2Q5VUJ9 269 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 NUTM2GQ5VZR2 741 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 HGSNATQ68CP4 663 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 ALG1LQ6GMV1 187 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 PPP4R4Q6NUP7 873 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 PRPF40BQ6NWY9 871 aaKnown RBP4.28□□□□□ -1.72
SSXP4-201ENST00000451349 FDX2Q6P4F2 183 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 DTHD1Q6ZMT9 781 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 KIAA1211Q6ZU35 1233 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 WDR75Q8IWA0 830 aaKnown RBP4.28□□□□□ -1.72
SSXP4-201ENST00000451349 FAM20CQ8IXL6 584 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 FBF1Q8TES7 1133 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 UBASH3BQ8TF42 649 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 RUNDC1Q96C34 613 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 FAM161BQ96MY7 647 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 IER2Q9BTL4 223 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 BCO2Q9BYV7 579 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 CASS4Q9NQ75 786 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 FRMD4BQ9Y2L6 1034 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 EID1Q9Y6B2 187 aa4.28□□□□□ -1.72
SSXP4-201ENST00000451349 TM4SF5O14894 197 aa4.27□□□□□ -1.73
SSXP4-201ENST00000451349 GIPC1O14908 333 aa4.27□□□□□ -1.73
SSXP4-201ENST00000451349 PAPLNO95428 1278 aa4.27□□□□□ -1.73
SSXP4-201ENST00000451349 MYL1P05976 194 aa4.27□□□□□ -1.73
SSXP4-201ENST00000451349 ZNF865P0CJ78 1059 aaPredicted RBP4.27□□□□□ -1.73
SSXP4-201ENST00000451349 HOXA10P31260 410 aaPredicted RBP4.27□□□□□ -1.73
SSXP4-201ENST00000451349 FCGRTP55899 365 aa4.27□□□□□ -1.73
SSXP4-201ENST00000451349 CHMP4BP1P59074 171 aa4.27□□□□□ -1.73
SSXP4-201ENST00000451349 RAPGEF1Q13905 1077 aa4.27□□□□□ -1.73
SSXP4-201ENST00000451349 RPS26P11Q5JNZ5 115 aaPredicted RBP4.27□□□□□ -1.73
SSXP4-201ENST00000451349 EXOSC6Q5RKV6 272 aaKnown RBP4.27□□□□□ -1.73
SSXP4-201ENST00000451349 ZKSCAN2Q63HK3 967 aa4.27□□□□□ -1.73
SSXP4-201ENST00000451349 ANKRD34AQ69YU3 496 aa4.27□□□□□ -1.73
SSXP4-201ENST00000451349 BEND4Q6ZU67 534 aa4.27□□□□□ -1.73
SSXP4-201ENST00000451349 DRC7Q8IY82 874 aa4.27□□□□□ -1.73
SSXP4-201ENST00000451349 C1orf131Q8NDD1 294 aaKnown RBP4.27□□□□□ -1.73
SSXP4-201ENST00000451349 IPO4Q8TEX9 1081 aaKnown RBP4.27□□□□□ -1.73
SSXP4-201ENST00000451349 RNPC3Q96LT9 517 aaKnown RBP4.27□□□□□ -1.73
SSXP4-201ENST00000451349 SRPK1Q96SB4 655 aaKnown RBP4.27□□□□□ -1.73
SSXP4-201ENST00000451349 DUSP9Q99956 384 aaKnown RBP4.27□□□□□ -1.73
SSXP4-201ENST00000451349 CORO1BQ9BR76 489 aa4.27□□□□□ -1.73
SSXP4-201ENST00000451349 ZNF576Q9H609 170 aa4.27□□□□□ -1.73
SSXP4-201ENST00000451349 CYP4F12Q9HCS2 524 aa4.27□□□□□ -1.73
SSXP4-201ENST00000451349 ABCB6Q9NP58 842 aa4.27□□□□□ -1.73
SSXP4-201ENST00000451349 NRBP1Q9UHY1 535 aa4.27□□□□□ -1.73
SSXP4-201ENST00000451349 SPG7Q9UQ90 795 aa4.27□□□□□ -1.73
SSXP4-201ENST00000451349 LOC100289279A0A1B0GTE1 492 aa4.26□□□□□ -1.73
SSXP4-201ENST00000451349 MEGF11A6BM72 1044 aa4.26□□□□□ -1.73
SSXP4-201ENST00000451349 TCERG1O14776 1098 aaKnown RBP4.26□□□□□ -1.73
SSXP4-201ENST00000451349 TIMM44O43615 452 aa4.26□□□□□ -1.73
SSXP4-201ENST00000451349 B3GALT4O96024 378 aa4.26□□□□□ -1.73
SSXP4-201ENST00000451349 VDRP11473 427 aa4.26□□□□□ -1.73
SSXP4-201ENST00000451349 MAOBP27338 520 aa4.26□□□□□ -1.73
SSXP4-201ENST00000451349 HNRNPUQ00839 825 aaKnown RBP eCLIP4.26□□□□□ -1.73
SSXP4-201ENST00000451349 EXOSC10Q01780 885 aaKnown RBP4.26□□□□□ -1.73
SSXP4-201ENST00000451349 PPP2R3AQ06190 1150 aa4.26□□□□□ -1.73
SSXP4-201ENST00000451349 SERINC3Q13530 473 aa4.26□□□□□ -1.73
SSXP4-201ENST00000451349 POU4F3Q15319 338 aa4.26□□□□□ -1.73
SSXP4-201ENST00000451349 GLIPR1L2Q4G1C9 344 aa4.26□□□□□ -1.73
SSXP4-201ENST00000451349 NXPE4Q6UWF7 544 aa4.26□□□□□ -1.73
SSXP4-201ENST00000451349 PI16Q6UXB8 463 aa4.26□□□□□ -1.73
SSXP4-201ENST00000451349 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.26□□□□□ -1.73
SSXP4-201ENST00000451349 C12orf50Q8NA57 414 aaPredicted RBP4.26□□□□□ -1.73
SSXP4-201ENST00000451349 APPBP2Q92624 585 aa4.26□□□□□ -1.73
SSXP4-201ENST00000451349 TOX2Q96NM4 488 aa4.26□□□□□ -1.73
SSXP4-201ENST00000451349 METTL22Q9BUU2 404 aaPredicted RBP4.26□□□□□ -1.73
SSXP4-201ENST00000451349 SRCIN1Q9C0H9 1055 aa4.26□□□□□ -1.73
SSXP4-201ENST00000451349 SIRPGQ9P1W8 387 aa4.26□□□□□ -1.73
SSXP4-201ENST00000451349 KCNG1Q9UIX4 513 aa4.26□□□□□ -1.73
SSXP4-201ENST00000451349 DDX41Q9UJV9 622 aaKnown RBP4.26□□□□□ -1.73
SSXP4-201ENST00000451349 NAP1L2Q9ULW6 460 aaPredicted RBP4.26□□□□□ -1.73
SSXP4-201ENST00000451349 AKAP2Q9Y2D5 859 aa4.26□□□□□ -1.73
SSXP4-201ENST00000451349 NUB1Q9Y5A7 615 aa4.26□□□□□ -1.73
SSXP4-201ENST00000451349 GAS2O43903 313 aaKnown RBP4.25□□□□□ -1.73
SSXP4-201ENST00000451349 ZNF157P51786 506 aaPredicted RBP4.25□□□□□ -1.73
SSXP4-201ENST00000451349 AP3B2Q13367 1082 aa4.25□□□□□ -1.73
SSXP4-201ENST00000451349 SYCP2LQ5T4T6 812 aa4.25□□□□□ -1.73
SSXP4-201ENST00000451349 USP48Q86UV5 1035 aa4.25□□□□□ -1.73
SSXP4-201ENST00000451349 FTSJ3Q8IY81 847 aaKnown RBP4.25□□□□□ -1.73
SSXP4-201ENST00000451349 GLIS3Q8NEA6 775 aa4.25□□□□□ -1.73
SSXP4-201ENST00000451349 ZSCAN18Q8TBC5 510 aaPredicted RBP4.25□□□□□ -1.73
SSXP4-201ENST00000451349 ZNF700Q9H0M5 742 aa4.25□□□□□ -1.73
SSXP4-201ENST00000451349 RSPH9Q9H1X1 276 aaPredicted RBP4.25□□□□□ -1.73
SSXP4-201ENST00000451349 KCNF1Q9H3M0 494 aa4.25□□□□□ -1.73
SSXP4-201ENST00000451349 RAD18Q9NS91 495 aa4.25□□□□□ -1.73
SSXP4-201ENST00000451349 TMEM39AQ9NV64 488 aa4.25□□□□□ -1.73
SSXP4-201ENST00000451349 GPN3Q9UHW5 284 aaPredicted RBP4.25□□□□□ -1.73
SSXP4-201ENST00000451349 RPGRIP1LQ68CZ1 1315 aa4.24□□□□□ -1.73
SSXP4-201ENST00000451349 BMP3P12645 472 aa4.24□□□□□ -1.73
SSXP4-201ENST00000451349 ATF4P18848 351 aaPredicted RBP4.24□□□□□ -1.73
SSXP4-201ENST00000451349 GSTT1P30711 240 aa4.24□□□□□ -1.73
SSXP4-201ENST00000451349 USP11P51784 963 aa4.24□□□□□ -1.73
SSXP4-201ENST00000451349 AXDND1Q5T1B0 1012 aaPredicted RBP4.24□□□□□ -1.73
SSXP4-201ENST00000451349 HOMER1Q86YM7 354 aa4.24□□□□□ -1.73
SSXP4-201ENST00000451349 SIAH1Q8IUQ4 282 aa4.24□□□□□ -1.73
SSXP4-201ENST00000451349 SMG8Q8ND04 991 aaKnown RBP4.24□□□□□ -1.73
SSXP4-201ENST00000451349 FLCNQ8NFG4 579 aa4.24□□□□□ -1.73
SSXP4-201ENST00000451349 SVIPQ8NHG7 77 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms